prot_H-elongata_contig118647.1442.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118647.1442.1
Unique Nameprot_H-elongata_contig118647.1442.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A6H5L087_9PHAE (Calreticulin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L087_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.220e-31
Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 0
Query:    9 EDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEEIK 117
            E+EDGEWEP MIKNPE+K XXXXXXXXXXXXXXXXXXXXXXXXX   D  L +RCT CTH+GFELWQV AGT+FDEI+VTDSLEEAQ FAEETWA KKDKEKE HEE+K
Sbjct:  267 EEEDGEWEPAMIKNPEFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKTLGKRCTECTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEETWATKKDKEKEAHEELK 375          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7S2S2C9_9STRA (Calreticulin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.580e-25
Identity = 84/119 (70.59%), Postives = 102/119 (85.71%), Query Frame = 0
Query:   10 DEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCT-GCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEEIKAKEKEEEQVA 127
            ++DGEWEP MI NPEYK XXXXXXXXXXXXXXXXXXXXXXXXX + D+++   C  GCTH+GFELWQVK+GT+FD+II+TDSLEEAQ FAEET+  KKD EKE+ +EI+ K++EEE+ A
Sbjct:  278 EDDGEWEPPMIDNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDEEMYAVCKDGCTHVGFELWQVKSGTIFDDIIITDSLEEAQKFAEETFFKKKDAEKEMFDEIQKKQREEEEAA 396          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A6V1P0W5_HETAK (Calreticulin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P0W5_HETAK)

HSP 1 Score: 107 bits (268), Expect = 3.340e-25
Identity = 82/108 (75.93%), Postives = 93/108 (86.11%), Query Frame = 0
Query:    8 DEDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEE 115
            DE+EDGEWEP MI NPEY  XXXXXXXXXXXXXXXXXXXXXXXXX   DDKL  RC GCTH+GFELWQVKAGT+FD+++VTDSLEEA+AFA++T+  KKD EK + EE
Sbjct:  256 DEEEDGEWEPPMIDNPEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDDKLHHRCKGCTHVGFELWQVKAGTIFDDLLVTDSLEEARAFAKKTFWAKKDAEKAMFEE 363          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: B8C4G1_THAPS (Calreticulin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4G1_THAPS)

HSP 1 Score: 104 bits (260), Expect = 3.940e-24
Identity = 83/117 (70.94%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    8 DEDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCT-GCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEEIKAKEKEE 123
            D+++DGEWEP M+ NPEYK XXXXXXXXXXXXXXXXXXXXXXXXX + D+ +   C  GCTH+GFELWQVKAGTLFD+IIVTDSLEEAQ FAEET+  KKD EKE+ +  + K++EE
Sbjct:  260 DDEDDGEWEPPMVDNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDENMYAVCKDGCTHVGFELWQVKAGTLFDDIIVTDSLEEAQKFAEETFFKKKDAEKEMFDAAQKKDREE 376          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A835ZEE0_9STRA (Calreticulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.040e-23
Identity = 83/116 (71.55%), Postives = 93/116 (80.17%), Query Frame = 0
Query:    8 DEDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEEIKAKEKEE 123
            D+ EDGEWEP  I NP+Y+GXXXXXXXXXXXXXXXXXXXXXXXXX   D  L +RC GCTH+GFELWQV +GT+FD+IIVTDSL EA A AEE WA  KDKEK + EE+  KEK E
Sbjct:  262 DDAEDGEWEPAQIPNPDYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPLLYRRCDGCTHVGFELWQVTSGTIFDDIIVTDSLPEAFALAEEGWARWKDKEKAMWEEVSKKEKPE 377          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7S2BRV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRV9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 6.630e-23
Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0
Query:    8 DEDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKE----VHEEIKAKEKEE 123
            DE++DGEWEP MI NP+YK XXXXXXXXXXXXXXXXXXXXXXXXX K D  L QRC  C  IGFELWQVK+GT+FD+IIVTDSL+EA+AFA+ET+  KKD E E    V EE KA EK E
Sbjct:  267 DEEDDGEWEPPMISNPDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKNLFQRCKDCAMIGFELWQVKSGTMFDDIIVTDSLDEAKAFAKETFFAKKDAESEMFDNVEEERKAAEKAE 386          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7S0QAX2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QAX2_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 8.920e-23
Identity = 78/107 (72.90%), Postives = 86/107 (80.37%), Query Frame = 0
Query:    9 EDEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEE 115
            ++EDGEWE  M+ NPEYK XXXXXXXXXXXXXXXXXXXXXXXXX   D +L  RC  CTH+GFELWQVK GT+FD+IIVTDSL EAQA+A ETWA K   EKE  EE
Sbjct:   84 DEEDGEWEAPMVPNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDSELHVRCKDCTHVGFELWQVKTGTIFDDIIVTDSLAEAQAYAAETWAKKVGPEKEAFEE 190          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7S1Y210_9STRA (Calreticulin n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y210_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.560e-22
Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 0
Query:   10 DEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCT-GCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEEIKAKEKEEEQV 126
            ++DGEWE  MI NP+YK XXXXXXXXXXXXXXXXXXXXXXXXX K DD + + C  GCTH+GFELWQV  GTLFD+I+VTDSLEEAQ FAEET+  KKD EKE++++I+A+++  E+ 
Sbjct:  292 EDDGEWEAPMIDNPDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXKYDDNMYKVCKDGCTHVGFELWQVTTGTLFDDILVTDSLEEAQKFAEETFFKKKDGEKEMYDKIQAEKRASEEA 409          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7R9Y995_9STRA (Calreticulin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y995_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 9.260e-22
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0
Query:   10 DEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKEKEVHEE 115
            +EDGEWEP M+ NPEY  XXXXXXXXXXXXXXXXXXXXXXXXXF  D  L  RC  CTH+GFELWQVKAGT+FD+IIVTDSL+EA AFA+ET+  KKD EK++ ++
Sbjct:  291 EEDGEWEPPMVDNPEYXXXXXXXXXXXXXXXXXXXXXXXXXXXFLDDPALYHRCAPCTHVGFELWQVKAGTIFDDIIVTDSLDEAWAFADETFFAKKDGEKKMFDD 396          
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Match: A0A7S1BUM5_9STRA (Calreticulin n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUM5_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 9.680e-22
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:   10 DEDGEWEPTMIKNPEYKGXXXXXXXXXXXXXXXXXXXXXXXXXFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEETWAVKKDKE 109
            ++DGEWEP MI NP+Y  XXXXXXXXXXXXXXXXXXXXXXXXX+  DD+L  RC  CTHIGFE+WQV AGTLFD+II+TDS+EEAQAFAEET+  KKD E
Sbjct:  260 EDDGEWEPPMIPNPDYNXXXXXXXXXXXXXXXXXXXXXXXXXXYIKDDELYNRCVDCTHIGFEIWQVTAGTLFDDIILTDSIEEAQAFAEETFYKKKDPE 359          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118647.1442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L087_9PHAE2.220e-3181.65Calreticulin n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A7S2S2C9_9STRA1.580e-2570.59Calreticulin n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A6V1P0W5_HETAK3.340e-2575.93Calreticulin n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
B8C4G1_THAPS3.940e-2470.94Calreticulin-like protein (Fragment) n=1 Tax=Thala... [more]
A0A835ZEE0_9STRA2.040e-2371.55Calreticulin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2BRV9_9STRA6.630e-2371.67Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0QAX2_9EUKA8.920e-2372.90Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1Y210_9STRA6.560e-2267.80Calreticulin n=2 Tax=Grammatophora oceanica TaxID=... [more]
A0A7R9Y995_9STRA9.260e-2272.64Calreticulin n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A7S1BUM5_9STRA9.680e-2276.00Calreticulin n=3 Tax=Corethron hystrix TaxID=21677... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableGENE3D2.60.120.200coord: 49..129
e-value: 3.0E-16
score: 61.6
NoneNo IPR availablePANTHERPTHR11073:SF2CALRETICULINcoord: 1..125
IPR009033Calreticulin/calnexin, P domain superfamilyGENE3D2.10.250.10coord: 1..40
e-value: 5.5E-14
score: 54.2
IPR009033Calreticulin/calnexin, P domain superfamilySUPERFAMILY63887P-domain of calnexin/calreticulincoord: 1..58
IPR001580Calreticulin/calnexinPFAMPF00262Calreticulincoord: 13..87
e-value: 1.9E-23
score: 82.9
IPR001580Calreticulin/calnexinPANTHERPTHR11073CALRETICULIN AND CALNEXINcoord: 1..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118647contigH-elongata_contig118647:259..1064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118647.1442.1mRNA_H-elongata_contig118647.1442.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118647 259..1064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118647.1442.1 ID=prot_H-elongata_contig118647.1442.1|Name=mRNA_H-elongata_contig118647.1442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
AEKPDDWDEDEDGEWEPTMIKNPEYKGVWKPKMIPNPDYNGPWEHPKIPN
PDFKIDDKLAQRCTGCTHIGFELWQVKAGTLFDEIIVTDSLEEAQAFAEE
TWAVKKDKEKEVHEEIKAKEKEEEQVAGRLVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009033Calreticulin/calnexin_P_dom_sf
IPR001580Calret/calnex