prot_H-elongata_contig11860.1436.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11860.1436.1
Unique Nameprot_H-elongata_contig11860.1436.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length238
Homology
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: D7G8K0_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8K0_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 6.350e-76
Identity = 136/253 (53.75%), Postives = 166/253 (65.61%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDV----VLPK-----------RGYTELTRLDLSYNSLSNDALSVLGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEGDIVIDVLSKLPALQELNLAFNYFTCVTLTPEAIENAFVSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHLLDKANR 238
            ML+DAC C+LP+EGRRADVSGRGLV VV+ED+ FF+RL+++DAGDNSL  +SF  +PRLEELRLPCN IRD+    +L +            GY +L RLDLSYNSLS  ALSVL  L                                  +LE D V DVLS+LP L+ELNLAFNYFT + L  +  E AF  LE LDLGFN+I SE+DV V+VL  +LQR++LYGNPLAGPTGED LGL VE L+ +++R
Sbjct:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVREDMSFFVRLQAVDAGDNSLPFDSFLDLPRLEELRLPCNSIRDIDGRKILTQLQLGGGDGNSGNGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLVDLPVAMARFPVLQKLSLERNQLESDAVFDVLSRLPGLRELNLAFNYFTGINLDLDIAEQAFPLLEALDLGFNFIGSESDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLVAESDR 253          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A836C9W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.170e-46
Identity = 100/240 (41.67%), Postives = 132/240 (55.00%), Query Frame = 0
Query:    2 LLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVV---LPKRGYTELTRLDLSYNSLSNDALSVLGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEGDIVIDVLSKLPALQELNLAFNYFTCVTLTPEAIENAFVSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHLLDKANR 238
            +L+    +LP+  RR+D+SG     VVQ+DL +F +L+ LDAGDNSL L+ FA + +L ELRL CNGI       LP   Y  LTRLDLSYN+LS  A++ L +L                                  +LEG  V+  L+ LP L+EL+LAFNYF  +              E LDL FNYI ++ D   LVLL +L R++LYGNPL GP+GED  G+ +E L D A+R
Sbjct:  162 ILEGSGVDLPDGARRSDISGGNFTEVVQDDLGYFNKLQELDAGDNSLSLSCFACLQQLHELRLQCNGITAPPAPPLPPASYPALTRLDLSYNALSGAAIAQLAQLPVLKYLDLSCNGLTSLPAELAALPCLECLVLERNQLEGGEVMATLATLPVLRELSLAFNYFAAI--------------EALDLAFNYIGAQADAMPLVLLPKLARVILYGNPLCGPSGEDLSGITIEGLEDAADR 387          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A7S3XTX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX8_HETAK)

HSP 1 Score: 157 bits (397), Expect = 6.900e-41
Identity = 97/238 (40.76%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    2 LLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEGDIVIDVLSKLPALQELNLAFNYFTCVTLTPE-AIENAFVSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHLLDKANR 238
            LL A   + P+E RRAD SG+G   V   DL +F+RL +LD  +N L L  F  +PRL++LRL  NG+   + P+ GY  L RLDLSYN++   AL  L  L                                  + +G+I + VL+++P L+EL LAFN+    T   E A E  F +L+ LDL FNY+ +E DV  L  L  L R++LYGNPLAGPTGEDP G  V   L  A R
Sbjct:  105 LLQAAGVQFPDEARRADASGKGYEEVNTADLGYFVRLATLDVSENHLALEWFCRLPRLKDLRLAYNGLT-ALGPQEGYPALMRLDLSYNAVEPAALGCLAALPRLRALDLTSNGLAELPDALAGFHTLEILTLEHNQFDGEIPL-VLAEIPKLRELYLAFNFID--TAPAECAAEGQFPALDLLDLAFNYVAAERDVLPLAALPVLTRVILYGNPLAGPTGEDPAGACVRRFLHLAER 338          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A7S4E570_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E570_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.520e-22
Identity = 78/251 (31.08%), Postives = 107/251 (42.63%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNS-LQLNSFALMPRLEELRLP------CNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEGDIVIDVLSKLPALQELNLAFNYFTCVTLTPEAIENAF------VSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHLLDKANR 238
            +LLDAC  E P+EG RADVSGR    V   DL +F  L  +DA DN  L L  F  +PRL++LR        C+ + +   P+     L  LDLSYN+ + D +S L  +                                  +L+GD                      +  T+   A   +         L  LDL  N+I SE D+  L +L +L+++ LYGNPL G TGEDP G  V  L+  A +
Sbjct:  127 LLLDACGVEFPDEGHRADVSGRHATEVSSTDLEYFPNLSWVDASDNPRLPLEDFGSLPRLKDLRFAANSWSVCSSVSEDWFPR-----LLVLDLSYNTATLDGISQLVTMPRLRDLDLTGNGLVELPDVFSDFQSLEKLFLERNRLQGDXXXXXXXXXXXXXXXXXXXXVTSTPTIDAMAEATSLDHTEILAELVALDLAHNHIRSEKDIDDLTVLPKLEQLSLYGNPLLGATGEDPTGETVRTLVQTATQ 372          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A7S2S8V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8V5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.700e-15
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0
Query:  152 PALQELNLAFNYFTCVTLTPEAIENAFVSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHL 232
            P LQEL+L FNY T        ++  F  L  L+L FNYI SE+D+  +V L +L+ +V+YGNPL GPTGEDP G  +E+L
Sbjct:    1 PQLQELHLGFNYLTVFPRAATGVDR-FPCLHTLNLAFNYIASEDDLVPVVHLHKLEMLVIYGNPLLGPTGEDPSGTSIEYL 80          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A7S0N1X0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1X0_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 6.250e-14
Identity = 68/245 (27.76%), Postives = 101/245 (41.22%), Query Frame = 0
Query:    2 LLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQ-LNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----KLEGDIVIDVLSKLPALQELNLAFNYFTCVTLTPEAIE-NAFVSLECLDLGFNYINSENDVAVLVLLAQLQRIVLYGNPLAGPTGEDP------LGLRVEHLL 233
            L+ AC  ELP   +   + G+  V V  EDL  F+ L+ LD GDN L  ++  A +P L  L++ CN +  + +    +  L  L+L YN L  DAL  L  L                                       K+   +V   L  LP L+ L +  N     +  P+ +  + F +L  LDL  N +  E+D+   V   +L+++VL+G PLA     D       LG    HLL
Sbjct:   85 LVGACGVELPEAVQTVSLMGKNYVDVEVEDLHHFVCLQDLDVGDNQLPGMHCLAELPVLRTLKMQCNSLSTLQIEPGSFHTLETLELCYNCLGADALLQLATLPNLRELDVSFNCINRPPSEQFPSEAFPALETLHLGGQTPKMAPSVVYR-LGHLPRLRALRVPNNNIQ--SFNPDKVRPDMFPALGLLDLADNRVEVEDDIVAFVQCPELEKVVLWGTPLATMAPRDISSEVPFLGSNKAHLL 326          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: A0A8C9SUF2_SCLFO (X-ray radiation resistance associated 1 n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SUF2_SCLFO)

HSP 1 Score: 68.6 bits (166), Expect = 1.080e-9
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRL 103
            +L+     + P++   ADVSGR L  V ++DL+ F  +  ++A DN L L +F   P L EL L  NG+RD+ +    +  L  LD+S+N+LS+ A+  L RL
Sbjct:   90 LLMKLYRVDKPSDLCSADVSGRKLHSVKEDDLKEFDSVAYVNASDNRLTLEAFRGFPLLRELELSMNGLRDLRVTAARFPHLRVLDVSFNNLSSGAILDLARL 192          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: UPI000B903F40 (X-ray radiation resistance-associated protein 1 n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=UPI000B903F40)

HSP 1 Score: 67.0 bits (162), Expect = 3.710e-9
Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRL 103
             LL     + P++   AD+S + L  V  EDL+ F  +  ++A  NSL L SF+    L EL L  NGIR++      +  L  LDLSYNSLS +A+  LG+L
Sbjct:   84 FLLQLHCVDEPSKLCSADISEQKLNSVEPEDLKVFDNIAHINASINSLSLGSFSSFVSLRELSLSLNGIRNMTFDATDFPYLEVLDLSYNSLSAEAIVSLGQL 186          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: UPI000C315C84 (X-ray radiation resistance-associated protein 1 n=1 Tax=Amphiprion ocellaris TaxID=80972 RepID=UPI000C315C84)

HSP 1 Score: 63.9 bits (154), Expect = 4.030e-8
Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRL 103
             LL     + P+E   AD+S + L  V  EDL+ F  + ++DA  NSL L SF+    L  L L  NGI ++      +  L  LDLSYNSLS +A+  L RL
Sbjct:   78 FLLQLHCVDEPSELCSADISEQKLNSVEPEDLKVFDNVANIDASINSLSLGSFSSFVSLRVLSLSLNGICNMTFDVADFPYLEVLDLSYNSLSAEAIVSLARL 180          
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Match: UPI0018F613C5 (X-ray radiation resistance-associated protein 1 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F613C5)

HSP 1 Score: 63.9 bits (154), Expect = 4.250e-8
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 0
Query:    1 MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQLNSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVLGRL 103
             LL     + P E    +VSG+ LV   + D   F  +  ++A +N L L +F   P L+EL L  NGIR+V +    +  L  LDLSYNSLS +A+  LG L
Sbjct:   97 FLLKHHSVDSPAELCSLNVSGQNLVTAKENDFVHFDSVIYINASENLLPLEAFHTFPALKELELSFNGIRNVCIGTEDFQYLEVLDLSYNSLSPEAIYELGIL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11860.1436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8K0_ECTSI6.350e-7653.75Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A836C9W6_9STRA9.170e-4641.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XTX8_HETAK6.900e-4140.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4E570_9STRA1.520e-2231.08Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2S8V5_9STRA1.700e-1549.38Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0N1X0_9CHLO6.250e-1427.76Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A8C9SUF2_SCLFO1.080e-937.86X-ray radiation resistance associated 1 n=3 Tax=Sc... [more]
UPI000B903F403.710e-939.81X-ray radiation resistance-associated protein 1 n=... [more]
UPI000C315C844.030e-839.81X-ray radiation resistance-associated protein 1 n=... [more]
UPI0018F613C54.250e-838.83X-ray radiation resistance-associated protein 1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 82..100
e-value: 0.39
score: 10.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 104..163
e-value: 8.2E-8
score: 31.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 5..223
e-value: 1.5E-34
score: 121.1
IPR038894X-ray radiation resistance-associated protein 1PANTHERPTHR22710X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1coord: 1..224
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 19..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11860contigH-elongata_contig11860:7642..8515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11860.1436.1mRNA_H-elongata_contig11860.1436.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11860 7630..8515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11860.1436.1 ID=prot_H-elongata_contig11860.1436.1|Name=mRNA_H-elongata_contig11860.1436.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
MLLDACDCELPNEGRRADVSGRGLVGVVQEDLRFFIRLRSLDAGDNSLQL
NSFALMPRLEELRLPCNGIRDVVLPKRGYTELTRLDLSYNSLSNDALSVL
GRLPNLTDLDLTCNGLVKLPEAMGVFFRLQKLSLERNKLEGDIVIDVLSK
LPALQELNLAFNYFTCVTLTPEAIENAFVSLECLDLGFNYINSENDVAVL
VLLAQLQRIVLYGNPLAGPTGEDPLGLRVEHLLDKANR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR038894XRRA1