prot_H-elongata_contig11859.1433.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11859.1433.1
Unique Nameprot_H-elongata_contig11859.1433.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length661
Homology
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A6H5KLN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN8_9PHAE)

HSP 1 Score: 598 bits (1543), Expect = 6.310e-205
Identity = 350/625 (56.00%), Postives = 419/625 (67.04%), Query Frame = 0
Query:    1 MSINREAVDDLPTATPPAKQGNPVSTIRHRRRGSESAISFSMS-RP--STTDVSPRGRPGGNIPHYPYPRHRATATSSGFFGWKNPNENSVSAEDDGIPKLVSLSDLIR-DAEVPATLLYEPAMETGAIMTARDL--GKFPQHAMHGGTVGAGDALKAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAGCATMGGRPLSISYRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGSKDSCALLLRAGAQVDKRADDGWTAIDFALNVR--GRGTSSG----VLAVLRDPPKKVPRSPTTVRATLVKFSNLEPEDAVPPVELRWRVSSQASLAPTTCGDVERYYIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQIIERGIALRKNLCLPQSQTASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDHNWPLGGIVSMVKGKETPSPVGPGDGEVSQAKLAHRGPGQQPSPIIVDQRRGTGKGHGVSWAKDESERSVPLRHATGPFASEALNTSPSGRLDR-------EWQPSGDPPYRSPMNRRSQSHGIT-TRIDSFAQASSRTSNREVLGGQGYSPPHSSPPLEKGTE 605
            MS+N +   ++         G       HRR  SE++ +F    RP  ST+  SPR R GG               S G +GW+  + N+ S  DD  P+LVSL+DLIR + +VPATLLYE   +T A M ARD+  G     AM+GG VG  +AL+AAEHG+S+ LSKFLQDGG+P+T+  LHH+RWSLLHLAAGC++MGGR    S+R RPEPDC DGY TCVSELLAAGADPN+ SS  G  TPLMSAA  GSK+ C LLLRAGA++D RADDG TA DFA   R  G G+S G    VL VLR+PPKK+PRSPT V ATL + S+LEPE+ VPPVE+RWRV SQASLAPT CGDVER+Y+K WCRGKGKEVI TKTST D+ RRDFCRNQII+RGIALRKNLCLPQSQT S IVHGL+AG +YSFTVSCVAEVEGALRHSPPSCMSKPL I +SKEDH W LGG++ MV GK+TPS    G+G    A    R   Q  SP  +DQRRG  K   VSWAKD+   ++  R       S+ +  SPSG   R       EW+P    P   P+ RRSQS+  + TR D+F Q S  T++  +     + PP +S  LE+GTE
Sbjct:    1 MSLNHQGEPEV--------AGRKTGNRAHRRSESEASGAFGGGPRPFSSTSYDSPRWRGGGA---------NKQRGSGGRYGWRANDGNNASPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLG-YTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGIHDSVLDVLREPPKKIPRSPTMVIATLAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTADVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIVHGLRAGGVYSFTVSCVAEVEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDTPSSGTTGEG--GAAPQVRRVTNQ--SPTSIDQRRGPAKSFSVSWAKDDIAPTIDQRQPASYRVSDDVIVSPSGDFGRSLTSNASEWEPKHASPVV-PLRRRSQSYASSATRADTFLQTS--TADETIRASMAFPPPSTSSHLEEGTE 600          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: D7FV58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV58_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 7.730e-131
Identity = 231/394 (58.63%), Postives = 276/394 (70.05%), Query Frame = 0
Query:    1 MSINREAVDDLPTATPPAKQGNPVSTIRHRRRGSESAISFSMS-RP--STTDVSPRGRPGGNIPHYPYPRHRATATSSGFFGWKNPNENSVSAEDDGIPKLVSLSDLIR-DAEVPATLLYEPAMETGAIMTARDL--GKFPQHAMHGGTVGAGDALKAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAGCATMGGRPLSISYRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGSKDSCALLLRAGAQVDKRADDGWTAIDFALNVR--GRGTSSG----VLAVLRDPPKKVPRSPTTVRATLVKFSNLEPEDAVPPVELRWRVSSQASLAPTTCGDVERYYIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQ 382
            MS+N++   ++       K GN      HRR  SE++ +F    RP  ST+  SPR R GG               S G +GW+  + N+VS  DD  P+LVSL+DLIR + +VPATLLYE   +T A M ARD+  G     AM+GG VG  +AL+AAEHG+S+ LSKFLQDGG+P+T+  LHH+RWSLLHLAAGC++MGGR    S+R RPEPDC DGY TCVSELLAAGADPN+ SS  G  TPLMSAA  GSK+ C LLLRAGA++D RADDG TA DFA   R  G G+S G    VL VLR+PPKK+PRSPT V A L + S+LEPE+ VPPVE+RWRV SQASLAPT CGDVER+Y+K WCRGKGKEVI TKTST D+ RRDFCRNQ
Sbjct:    1 MSLNQQGEPEVADR----KTGNRA----HRRSESEASGAFGGGPRPFTSTSYDSPRWRGGGA---------NKQRGSGGRYGWRANDGNNVSPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLG-YTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGTHDSVLDVLREPPKKIPRSPTLVIAALAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTVDVPRRDFCRNQ 376          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A7S2CTM4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTM4_9STRA)

HSP 1 Score: 310 bits (795), Expect = 5.750e-95
Identity = 167/320 (52.19%), Postives = 216/320 (67.50%), Query Frame = 0
Query:  142 GTVGAGDALKAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAGCATMGGRPLSISYRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGSKDSCALLLRAGAQVDKRADDGWTAIDFALNVRGRGTSSGVLAVLRDPPKKVPRSPTTVRATLVKFSNLEPEDAVPPVELRWRVSSQASLAPTTCGDVERYYIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQIIERGIALRKNLCLPQSQTASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDHNWPLGGIVSMV 461
            G V   DALKAAEHG+S  L+ +L  GGDP  V  LHHM WSLLHLA GCA MGG  +S +YR+RPEPDC +G+ATCVS L+AAGADPNVAS  G   TPLM A+ +G  D C LLL+AGA V   A DG TA+D A   R       VL VL +PP+ +PRSP  V A L+ +   E ED    VE+RW++ +  S+A   CG+++RY ++ + +G+  EV+ +        RRDFC+NQ+++RGIALR+NL LPQ +TAST++HGL  G  Y FTVSC+AE++G++R SPPS MSKPL I  S E+  W +G I+  V
Sbjct:   16 GAVSTQDALKAAEHGNSDVLAAYLHAGGDPMAVSRLHHMGWSLLHLATGCALMGG--ISNTYRTRPEPDCPNGFATCVSLLMAAGADPNVASKQGH-YTPLMGASLSGDADCCRLLLQAGAIVKHMALDGQTALDAANRSRFADGHMRVLQVLGNPPRLLPRSPLEVTARLLDY--YEGEDRERDVEVRWKIPTTTSMALVKCGEIQRYVVRTYVKGQELEVMHSAVGPGRRQRRDFCQNQVVDRGIALRQNLALPQPRTASTLIHGLIPGVTYHFTVSCIAEIDGSIRDSPPSLMSKPLDIP-SYEEEEWNIGEILDKV 329          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A835YST7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST7_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.350e-80
Identity = 197/522 (37.74%), Postives = 250/522 (47.89%), Query Frame = 0
Query:   94 GIPKLVSLSDLIRDAEV-------PATLLYEPAMETGAIMTARDLGKFP-QHAMHGGTVGAGDALKAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAG------------------------CATMGGRPLSIS---YRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGSKDSCALLLRAGAQVDKRADDGWTAIDFALNVRGRGTSSGVLA-----------------------------------------------------------------VLRDPPKKVPRSPTTVRATLVKFSNLEPEDA-------------------------------------------VPPVELRWRVSSQASLAPTTCGDVERYYIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQIIERGIALRKNLCLPQSQTASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDHNWPLGGIVS--MVKGKETPSPV 470
            G  KL+SLSDLIR  E        PA LLY    E G ++      K   + A++ G VG  +AL+AAEHG+S  L++FLQD GDP T   LHHMRWSLLHLAAG                        CA MG   LS++   +RSRPEPDC DGYA C++ LLAAGADPN A+S  GG TPLM AA  GS +SC LLLRAGA    R   G TA+DFA   R    +    A                                                                 VL++PP+ VPRSP  V A L   S ++ E                                                 E+RW + SQASL P  CG  ERY +KCW +G+  +V+ T T      RRDFC++  ++RGIALR NL L   +TASTI+H L+ G  YSFTVS +AEV+GAL+ SPPS +SK ++I  +K+D  W +GG++S  M + + T  P+
Sbjct:  181 GTEKLMSLSDLIRREEGGRTRGGGPAPLLYSNEGEAGELLDGDGFDKGGGRKAVNNGAVGTQEALQAAEHGNSALLARFLQDNGDPRTTSRLHHMRWSLLHLAAGFNXXXXXXXXXXXXXXXXXXXXXGCAGMGSA-LSLAGAAHRSRPEPDCNDGYAACIALLLAAGADPN-ATSIQGGYTPLMGAAVTGSAESCWLLLRAGANPLARTAAGQTALDFAQTPRAGAPAGAHQAALKXXXXXXXXXXXXXXXXTALDFAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQNPPRLVPRSPLQVVARLADRSLVDEEPCRRCLXXXXXXXXXXXXXXXXEASHGFRLVTRSQEDDSQCVEXXXXXXEVRWLIPSQASLLPAHCGAAERYLVKCWSQGQASDVVRTNTGNSLKPRRDFCKHGAMDRGIALRNNLSLQAPRTASTIIHNLRPGREYSFTVSLLAEVDGALQQSPPSAVSKTIYIPKTKDDAQWSVGGVLSKMMPRAQGTDGPL 700          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A8J2SBP4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBP4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.240e-32
Identity = 87/206 (42.23%), Postives = 111/206 (53.88%), Query Frame = 0
Query:  148 DALKAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAGCATMGGRPLSISYRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGSKDSCALLLRAGAQVDKRADDGWTAIDFALNVRGRGTSSGVLAVLRDPPKKVPRSPTTVRATLVKFSNLEPEDAVPPVELRWRVSSQASLAPTTCGDVERYYIK 353
            DAL+AAEHGD+  L+ +L++GGDP     LHHM WSLLHLAAGCA  GG   + +YR RPEPD   G+A CV  LLAAGA+P   ++G     PL  A   G   S  LLLRAGA          T ++             +  +L  PPK +PRSP  V A L ++   +  + V  VE+RWR    A       G VERY ++
Sbjct:   51 DALEAAEHGDARALAAYLENGGDPAATSRLHHMGWSLLHLAAGCALAGGPGAAQAYRRRPEPDAPGGFARCVELLLAAGAEP---ATGDERPAPLAGAVLCGDAASARLLLRAGAAAP-------TEVEAPPGRHTAAEREAMRELLAAPPKLLPRSPLRVEAKLSEYVEGDARERV--VEVRWRPPPPAPGV----GPVERYVVR 240          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A7S2XYK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.620e-29
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 0
Query:  345 GDVERYYIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQIIERGIALRKNLCLPQSQTASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDHNWPLGGIVSMVKGKETPSPVG 471
            G+V +Y +KCW  GK  +VI   T      RRDFC+N ++ RGIALR+NL LP  QTASTIVH L  G  YSFTVS +AE++G L  SPPSCMS+ + I    ++  W +G + +M+    TP+P G
Sbjct:    1 GEVIKYVVKCWGNGKMVDVIHATTGVGRGQRRDFCQNGVMNRGIALRQNLNLPPPQTASTIVHNLMPGLHYSFTVSAIAELDGVLCESPPSCMSRVVQIPVRDKEDRWMMGEVFNMMS---TPNPTG 124          
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Match: A0A7S4D9X9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9X9_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-17
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  374 SRRDFCRNQIIERGIALRKNLCLPQSQTASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDHNWPLGGIVSMVKGKETPSPV 470
            +RRDFC + +++RG+ALR+NL LP    AS +VH L+ G  YSFTVSCVA V G L  SPPS +S+ + +  ++++  W LG +      K+   PV
Sbjct:   29 NRRDFCEDTVVDRGVALRRNLGLPPPPVASAVVHNLRPGAHYSFTVSCVAAVGGRLAESPPSVLSRVVAVPQAEKEDRWMLGMMAGGSGPKDKGGPV 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11859.1433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KLN8_9PHAE6.310e-20556.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV58_ECTSI7.730e-13158.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CTM4_9STRA5.750e-9552.19Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A835YST7_9STRA1.350e-8037.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SBP4_9STRA2.240e-3242.23Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2XYK3_9STRA1.620e-2948.82Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4D9X9_HETAK1.020e-1744.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 237..266
e-value: 0.25
score: 20.4
coord: 180..231
e-value: 78.0
score: 12.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 238..265
e-value: 0.0012
score: 19.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 237..269
score: 9.671
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 147..287
e-value: 3.9E-19
score: 70.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 152..280
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 121..277
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 214..278
score: 14.557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11859contigH-elongata_contig11859:1003..5134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11859.1433.1mRNA_H-elongata_contig11859.1433.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11859 2..7736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11859.1433.1 ID=prot_H-elongata_contig11859.1433.1|Name=mRNA_H-elongata_contig11859.1433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=661bp
MSINREAVDDLPTATPPAKQGNPVSTIRHRRRGSESAISFSMSRPSTTDV
SPRGRPGGNIPHYPYPRHRATATSSGFFGWKNPNENSVSAEDDGIPKLVS
LSDLIRDAEVPATLLYEPAMETGAIMTARDLGKFPQHAMHGGTVGAGDAL
KAAEHGDSIHLSKFLQDGGDPETVKHLHHMRWSLLHLAAGCATMGGRPLS
ISYRSRPEPDCTDGYATCVSELLAAGADPNVASSGGGGVTPLMSAAWAGS
KDSCALLLRAGAQVDKRADDGWTAIDFALNVRGRGTSSGVLAVLRDPPKK
VPRSPTTVRATLVKFSNLEPEDAVPPVELRWRVSSQASLAPTTCGDVERY
YIKCWCRGKGKEVIMTKTSTEDMSRRDFCRNQIIERGIALRKNLCLPQSQ
TASTIVHGLQAGEIYSFTVSCVAEVEGALRHSPPSCMSKPLHISDSKEDH
NWPLGGIVSMVKGKETPSPVGPGDGEVSQAKLAHRGPGQQPSPIIVDQRR
GTGKGHGVSWAKDESERSVPLRHATGPFASEALNTSPSGRLDREWQPSGD
PPYRSPMNRRSQSHGITTRIDSFAQASSRTSNREVLGGQGYSPPHSSPPL
EKGTEGLYRLSHETSTVSPVVSGNARGQRMGRRSLDSRSNRGSRSREHHN
SFQVERCNVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom