prot_H-elongata_contig118532.1430.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118532.1430.1
Unique Nameprot_H-elongata_contig118532.1430.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
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BLAST of mRNA_H-elongata_contig118532.1430.1 vs. uniprot
Match: A0A6H5KEL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL6_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.590e-56
Identity = 99/124 (79.84%), Postives = 108/124 (87.10%), Query Frame = 0 
Query:    3 GFVEGVKNLFGGTERPPDPVVPVKVVYAPMLELCHEPQTVVAPLVRASLALHNEGALLAFLSGDLSPVDIMHQLSGLALQDVKDGFSGLGPLSDENDRVTLVRLYLVGLSYAMGVVPKGDRVVG 126
            GFV GVK    G ER  DP VPV+VVY PMLE CHEPQTVV+PLVRASLALHNEGALL FL+GD+SPVDIM++LSGLALQDVKDGF GLGP+SDENDRVTLVRLYL+GLSYAMG+VPKG   VG
Sbjct:  931 GFVVGVKRALIGPERTADPTVPVRVVYEPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDVSPVDIMYRLSGLALQDVKDGFGGLGPISDENDRVTLVRLYLLGLSYAMGIVPKGKEAVG 1054
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BLAST of mRNA_H-elongata_contig118532.1430.1 vs. uniprot
Match: D7G1T1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T1_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 4.320e-56
Identity = 98/124 (79.03%), Postives = 108/124 (87.10%), Query Frame = 0 
Query:    3 GFVEGVKNLFGGTERPPDPVVPVKVVYAPMLELCHEPQTVVAPLVRASLALHNEGALLAFLSGDLSPVDIMHQLSGLALQDVKDGFSGLGPLSDENDRVTLVRLYLVGLSYAMGVVPKGDRVVG 126
            GFV G+K    G ER  DP VPV+VVY PMLE CHEPQTVV+PLVRASLALHNEGALL FL+GD+SPVDIM++LSGLALQDVKDGF GLGP+SDENDRVTLVRLYL+GLSYAMG+VPKG   VG
Sbjct:  896 GFVVGMKRALIGPERTADPTVPVRVVYEPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDVSPVDIMYRLSGLALQDVKDGFGGLGPISDENDRVTLVRLYLLGLSYAMGIVPKGKEAVG 1019
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118532.1430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEL6_9PHAE1.590e-5679.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T1_ECTSI4.320e-5679.03Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118532contigH-elongata_contig118532:221..971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118532.1430.1mRNA_H-elongata_contig118532.1430.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118532 221..971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118532.1430.1 ID=prot_H-elongata_contig118532.1430.1|Name=mRNA_H-elongata_contig118532.1430.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MIGFVEGVKNLFGGTERPPDPVVPVKVVYAPMLELCHEPQTVVAPLVRAS
LALHNEGALLAFLSGDLSPVDIMHQLSGLALQDVKDGFSGLGPLSDENDR
VTLVRLYLVGLSYAMGVVPKGDRVVG
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