prot_H-elongata_contig118493.1427.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118493.1427.1
Unique Nameprot_H-elongata_contig118493.1427.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.130e-36
Identity = 85/202 (42.08%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+   GG  D +VLG  GRD  N+NG RL   A++++ S+ NT+F TPK GG    F    +K   ++RLD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 4.980e-35
Identity = 83/202 (41.09%), Postives = 124/202 (61.39%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF+VGYAPTET  T +      K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+F TPK GG    F    +K   ++RLD+I +RQ DR  VRN++V       S H+LV  ++RL
Sbjct:  249 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRL 446          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 8.200e-35
Identity = 84/202 (41.58%), Postives = 123/202 (60.89%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+F TPK GG    F    +K   ++RLD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 8.540e-35
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G      E I+ +L+KVR+        TF+VGYAPTET  T        K  FW  L   + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A+ ++LS+ NT+F TPK GG    F    +K   ++RLD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 8.660e-35
Identity = 85/201 (42.29%), Postives = 120/201 (59.70%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIR 193
            GV +A++E++  ++G      E IS +L+KVR+        TF+VGYAPTETA          K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  AA+++LS++NT+F TPK G      +    KE HR  LD+IL+RQ DR LVRN +V       S H LV  ++R
Sbjct:   52 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 248          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 8.770e-35
Identity = 85/201 (42.29%), Postives = 120/201 (59.70%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIR 193
            GV +A++E++  ++G      E IS +L+KVR+        TF+VGYAPTETA          K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  AA+++LS++NT+F TPK G      +    KE HR  LD+IL+RQ DR LVRN +V       S H LV  ++R
Sbjct:  164 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 360          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.500e-34
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF++GYAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+F TPK G      +    KE  ++RLD+IL+RQ DR  VR+++V       S H LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKE--KYRLDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 9.310e-34
Identity = 81/202 (40.10%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV + ++E++  ++G +    E I  +L+KVR+         F+VGYAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+F TPK GG    F    +K   ++RLD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:  155 GVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 352          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 9.620e-34
Identity = 82/202 (40.59%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+  TPK GG    F    +K   ++ LD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:   84 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTFQ-SSNKGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 281          
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.020e-33
Identity = 83/202 (41.09%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPTETAVTCQ------KSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDVRVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEGSKECHRWRLDYILVRQHDRMLVRNITVHPK--MKSVHRLVSASIRL 194
            GV +A++E++  ++G +    E IS +L+KVR+        TF+V YAPTET  T        K  FW  L + + EV + DHL+++MD NARTGR+ +G    D +++G  GRD  N+NG RLL  A++++LS+ NT+F TPK GG    F    +K   ++RLD+IL+RQ DR  VRN++V       S H LV  ++RL
Sbjct:  731 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQ-SSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 928          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118493.1427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE2.130e-3642.08Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE4.980e-3541.09Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE8.200e-3541.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K259_9PHAE8.540e-3541.09Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE8.660e-3542.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE8.770e-3542.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSV0_9PHAE1.500e-3440.10Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE9.310e-3440.10Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE9.620e-3440.59Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE1.020e-3341.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 4..194
e-value: 1.7E-17
score: 65.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 17..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118493contigH-elongata_contig118493:720..1301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118493.1427.1mRNA_H-elongata_contig118493.1427.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118493 720..1301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118493.1427.1 ID=prot_H-elongata_contig118493.1427.1|Name=mRNA_H-elongata_contig118493.1427.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
GVDLAVRESIACALGPDVIVPEHISAQLLKVRVIFKHRAVTTFIVGYAPT
ETAVTCQKSKFWKELRSTVAEVPASDHLILMMDTNARTGRKGEGGGLGDV
RVLGPIGRDTRNDNGSRLLACAAEHKLSIVNTFFSTPKRGGNSDAFTYEG
SKECHRWRLDYILVRQHDRMLVRNITVHPKMKSVHRLVSASIRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf