prot_H-elongata_contig11720.1345.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11720.1345.1
Unique Nameprot_H-elongata_contig11720.1345.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 7.020e-36
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVE-GTLFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKSQGILGETVIPKVDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFLLEAHEL 139
            WL+ D   T+   C +YV QA  + G LF  QSEHASFQI +P  ++R++ G++HQ+A RDPT++++LPDH  +QMN+G ++ EVS  + GILGET  P  D  G  IM G + IRG E+DY VA PL+ TF ++  EL
Sbjct:  247 WLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTFPMDTLEL 385          
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 9.640e-34
Identity = 60/134 (44.78%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVEGT--LFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKSQGILGETVIPKVDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFL 133
            W++ D   T+   C +YV  A+V+G   LF Y SEH SFQI +P  ++R++ G++HQLA RDPTD++++PDH  +QMN+ F+N++++  + GILGET    +D  G PIM+G   IRG ++DY+V  PL+  F+
Sbjct:  301 WILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVFV 434          
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.490e-32
Identity = 61/137 (44.53%), Postives = 92/137 (67.15%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVE-GTLFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKSQGILGETVIPKVDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFLLEAH 137
            W++ D   T+   C +YV +A  E G +F +QSEH SFQI +P  ++R++ G++HQ+A RDPTD+++LPDH  +QMN+   + +VS+ ++GILG+T +P  D  G PIM G + IRG E+DY V   L   F+ +AH
Sbjct:  476 WILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQDAH 612          
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.550e-32
Identity = 58/121 (47.93%), Postives = 86/121 (71.07%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVE-GTLFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKSQGILGETVIPKVDEAGVPIMKGPDCIRGKEDD 121
            W++ D   T+   C +YV +A  E G +F +QSEHASFQI +P  ++R++ G++HQ+A RDPTD+Y+LPDH  +QMN+  ++ +VS  ++GILGET +P  D +G PIM G + IRG E+D
Sbjct:  179 WILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEED 299          
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.350e-17
Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVEGTLFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKS-QGILGETVIPKVDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFLL 134
            W++  T       C +Y+++  + G     QS HA +QI +P + +R+NVG  HQ       D   LPD + +QM++G   + + N++  GILGET  P  DE G  +M G D  RG  +DY V+ PL   F L
Sbjct:  563 WVLSFTDMAAHDWCTEYISEKGLTGV----QSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFAL 692          
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 5.760e-12
Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    2 WLMKDTKRTDPQACDKYVNQASVEGTLFNYQSEHASFQITSPGMSLRVNVGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKS-QGILGETVIPKVDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFLL 134
            W++          C +Y+        L + QS  A +QI +P + +R NVG  HQ       D   +PD + ++M++G   + + N++  GILGET  P +DE G  +MKG    RG  +DY V+  L   F L
Sbjct:  219 WVLSFQHMAAHDWCTEYI----AHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFAL 348          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11720.1345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JW46_9PHAE7.020e-3648.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE9.640e-3444.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE2.490e-3244.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Y7_9PHAE2.550e-3247.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE3.350e-1735.82VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP35_9PHAE5.760e-1232.09Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11720contigH-elongata_contig11720:2403..3178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11720.1345.1mRNA_H-elongata_contig11720.1345.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11720 1987..3316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11720.1345.1 ID=prot_H-elongata_contig11720.1345.1|Name=mRNA_H-elongata_contig11720.1345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MWLMKDTKRTDPQACDKYVNQASVEGTLFNYQSEHASFQITSPGMSLRVN
VGKIHQLAQRDPTDKYNLPDHEAYQMNIGFENIEVSNKSQGILGETVIPK
VDEAGVPIMKGPDCIRGKEDDYIVASPLEKTFLLEAHELT*
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