prot_H-elongata_contig11667.1308.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11667.1308.1
Unique Nameprot_H-elongata_contig11667.1308.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
[Close]
BLAST of mRNA_H-elongata_contig11667.1308.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 5.900e-19
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:    1 FNRKKRLSEDECDASL--DYYDVCMADE-ENTDPIVPGPMWERFRPDSELFYHANDEGFSSRGGYHILIDAGGYNSGLNFGYCTLLVMEDIGLIP 92
            F R+ RLS DEC +S   DYYD+C+ADE  N     P   W  FR   E+ Y     G +S  GY +LI+ GG+N GLNFGYCTLLVMED+ +IP
Sbjct:  258 FTRRNRLSSDECSSSSSGDYYDICLADEGTNKTTYSPPQPWASFRQSEEMVY----SGVAS--GYPVLIETGGFNIGLNFGYCTLLVMEDLDVIP 346
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11667.1308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTQ4_ECTSI5.900e-1951.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11667contigH-elongata_contig11667:1883..3928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11667.1308.1mRNA_H-elongata_contig11667.1308.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11667 1883..3928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11667.1308.1 ID=prot_H-elongata_contig11667.1308.1|Name=mRNA_H-elongata_contig11667.1308.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
FNRKKRLSEDECDASLDYYDVCMADEENTDPIVPGPMWERFRPDSELFYH
ANDEGFSSRGGYHILIDAGGYNSGLNFGYCTLLVMEDIGLIP
back to top