prot_H-elongata_contig116537.1297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig116537.1297.1
Unique Name	prot_H-elongata_contig116537.1297.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	81

Homology

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.020e-48
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV
Sbjct:   64 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 144

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.290e-45
Identity = 74/81 (91.36%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERGNDV++MLVGNKTDL +RRQV
Sbjct:   67 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQV 147

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: A0A6V1RZC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZC8_HETAK)

HSP 1 Score: 154 bits (389), Expect = 2.330e-45
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVR+ERGNDVV+MLVGNKTDL +RRQV
Sbjct:   88 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRSERGNDVVIMLVGNKTDLADRRQV 168

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.880e-45
Identity = 75/81 (92.59%), Postives = 79/81 (97.53%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            Y+ DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKW+EDVRNERGNDVV+MLVGNKTDL +RRQV
Sbjct:   69 YMPDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQV 149

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: W7U9T7_9STRA (Small gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9T7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.530e-44
Identity = 74/81 (91.36%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERGNDV++MLVGNKTDL +RRQV
Sbjct:  160 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQV 240

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: K3WVM7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM7_GLOUD)

HSP 1 Score: 151 bits (381), Expect = 2.940e-44
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            Y+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ ERRQV
Sbjct:   82 YMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISERRQV 162

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: A0A812JV32_9DINO (Ryh1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JV32_9DINO)

HSP 1 Score: 149 bits (376), Expect = 2.950e-44
Identity = 73/81 (90.12%), Postives = 79/81 (97.53%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSS A++VYDITNRASFLNTSKWIEDVR+ERGNDVV++LVGNKTDL +RRQV
Sbjct:   23 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSGAIVVYDITNRASFLNTSKWIEDVRSERGNDVVIILVGNKTDLADRRQV 103

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: UPI001D059020 (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D059020)

HSP 1 Score: 148 bits (374), Expect = 3.240e-44
Identity = 70/81 (86.42%), Postives = 79/81 (97.53%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASF+NTSKW++DVR ERGNDV+++LVGNKTDL ++RQV
Sbjct:    2 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFINTSKWVDDVRGERGNDVIIVLVGNKTDLNDKRQV 82

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: A0A194S5F6_RHOGW (Uncharacterized protein (Fragment) n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S5F6_RHOGW)

HSP 1 Score: 149 bits (377), Expect = 3.770e-44
Identity = 71/81 (87.65%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVR+ERGNDV+++LVGNKTDL ++RQV
Sbjct:   44 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRSERGNDVIIVLVGNKTDLNDKRQV 124

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BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Match: T0QYI2_SAPDV (Ras-like protein Rab-6A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QYI2_SAPDV)

HSP 1 Score: 149 bits (377), Expect = 6.540e-44
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQV 81
            YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQV
Sbjct:   60 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDIADRRQV 140

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot

BLAST of mRNA_H-elongata_contig116537.1297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMQ4_ECTSI	2.020e-48	100.00	Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A4D9D1C8_9STRA	1.290e-45	91.36	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A6V1RZC8_HETAK	2.330e-45	95.06	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2UZT5_9STRA	3.880e-45	92.59	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
W7U9T7_9STRA	1.530e-44	91.36	Small gtp-binding protein n=1 Tax=Nannochloropsis ...	[more]
K3WVM7_GLOUD	2.940e-44	91.36	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A812JV32_9DINO	2.950e-44	90.12	Ryh1 protein n=1 Tax=Symbiodinium natans TaxID=878...	[more]
UPI001D059020	3.240e-44	86.42	uncharacterized protein n=1 Tax=Morchella sextelat...	[more]
A0A194S5F6_RHOGW	3.770e-44	87.65	Uncharacterized protein (Fragment) n=1 Tax=Rhodoto...	[more]
T0QYI2_SAPDV	6.540e-44	91.36	Ras-like protein Rab-6A n=4 Tax=Saprolegniaceae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..81 e-value: 0.0061 score: -79.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..81 e-value: 1.4E-10 score: 22.3
None	No IPR available	GENE3D	3.40.50.300		coord: 1..81 e-value: 9.6E-31 score: 108.5
None	No IPR available	PANTHER	PTHR24073:SF1026	RAS-RELATED PROTEIN RABH1E	coord: 2..81
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..81
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..81 score: 17.967
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 3..81 e-value: 9.5E-29 score: 100.1
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 6..77 e-value: 1.2E-14 score: 52.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig116537	contig	H-elongata_contig116537:868..1505 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig116537.1297.1	mRNA_H-elongata_contig116537.1297.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig116537 868..1505 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig116537.1297.1 ID=prot_H-elongata_contig116537.1297.1|Name=mRNA_H-elongata_contig116537.1297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTS
KWIEDVRNERGNDVVMMLVGNKTDLKERRQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase