prot_H-elongata_contig115571.1229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115571.1229.1
Unique Nameprot_H-elongata_contig115571.1229.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A6H5KP68_9PHAE (Eukaryotic translation initiation factor 3 subunit H n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP68_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.340e-98
Identity = 153/181 (84.53%), Postives = 166/181 (91.71%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQEGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKL---EQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQK 179
            +KAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINAL+FDLQE DRVDCDFDRLDLSTNPYLEK+LEFLCNWIDDLSNEQ KFNQY RN+ RQK    +QAR LQKRKQ NDERRAAG+  LP+++ AFDKK++ PNRME LLISNQI+AYC+QINKFAGSSFEKLFLAGSLQK
Sbjct:  154 IKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALIFDLQEEDRVDCDFDRLDLSTNPYLEKNLEFLCNWIDDLSNEQQKFNQYTRNVARQKQACWDQARLLQKRKQQNDERRAAGEEALPEEDSAFDKKLDAPNRMEGLLISNQISAYCSQINKFAGSSFEKLFLAGSLQK 334          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A836CJJ9_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 3.310e-79
Identity = 125/181 (69.06%), Postives = 151/181 (83.43%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQE---GDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQK 179
            +KAYRLSK FMR YRE+K++ IKPSEIL+ELPI+IRNPG++NALV+DLQ        +CDF+RLDLSTNPYLEK+LEFLC W+DDL+NEQ KF  Y R L +Q+ + ARW  +RK+ NDERRAAGD PLPDDE A D++ + PNRMESLLIS QI+AYC+QIN+F GSSFEKLFLAGSLQ+
Sbjct:  165 LKAYRLSKEFMRAYRERKSDHIKPSEILDELPIRIRNPGLVNALVYDLQGRGGAGSAECDFERLDLSTNPYLEKNLEFLCGWVDDLANEQWKFQAYTRTLLKQRHDAARWADRRKKANDERRAAGDEPLPDDE-AHDRRPDAPNRMESLLISTQISAYCSQINRFTGSSFEKLFLAGSLQR 344          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A6V1NQH4_HETAK (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQH4_HETAK)

HSP 1 Score: 189 bits (481), Expect = 1.810e-56
Identity = 98/181 (54.14%), Postives = 132/181 (72.93%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQEGDR-VDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPD--DEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQK 179
            +KA+RL++AFM   R   N  I+PSEILEELP++IRNPG++NALV+D+ +G    DC FDRLDL   PYLEK+LEFLC W+DDL+ E  KF Q+AR + +Q+ E+ RWL +R+  N+ERR  G+ PLP+  D   F +    P R+ESLLI+NQI  YC Q+N+F G+++ KL+LAGSL K
Sbjct:  151 LKAFRLTQAFMERNRRGDNGFIRPSEILEELPVRIRNPGLLNALVYDVTQGPGGADCTFDRLDLGGRPYLEKNLEFLCAWVDDLAAEHQKFQQHARAVAKQRQERLRWLARRRHENEERRLDGEPPLPERPDPGMF-RAQGGPPRLESLLIANQINTYCAQVNRFTGAAYSKLYLAGSLHK 330          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A7S2RWA1_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWA1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 5.910e-49
Identity = 90/178 (50.56%), Postives = 122/178 (68.54%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQEGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQK 179
            ++A+RLS+ F+   +  KNE I P+EILEELPIKIRNPG+INAL+FDLQ  +R+DCDF+RLDLSTNP+LEK+LE+L  W+DDL+ EQ KF    R        + +W +K+                + E   +++ + P+RM SLL+SNQI+ YC+QI+ F G+SF KLFLAGSL K
Sbjct:  178 LRAFRLSEKFVEAVKRDKNEFIPPAEILEELPIKIRNPGLINALLFDLQGNERLDCDFERLDLSTNPFLEKNLEYLSAWVDDLAQEQYKFQSEVR--------RDKWRRKQ----------------NPEGGAEEEFQAPDRMASLLVSNQISEYCSQIHHFTGASFGKLFLAGSLHK 331          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: D8S8X2_SELML (Eukaryotic translation initiation factor 3 subunit H n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S8X2_SELML)

HSP 1 Score: 152 bits (384), Expect = 7.590e-42
Identity = 88/188 (46.81%), Postives = 125/188 (66.49%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYR------EKKNEV-IKPSEILEELPIKIRNPGIINALVFDLQ-EGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDE--FAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQK 179
            +KA RL+ +FM +YR      EK  E  +   +I EE+P++I N  +++AL+ +L+ +     CDFDRL LSTNP++EK+LEFL   +DDLS EQ KF  Y RNL RQ+ +Q  WLQKR+  N  RR AG+ PLP+D+   A  K +  P+R++S LI+NQI  YC+QIN FAG SF K++L  ++ +
Sbjct:  154 LKALRLTDSFMELYRSNNFNGEKLREKNVTWQDIFEEIPVRISNSALVSALMTELETDSPATQCDFDRLVLSTNPFMEKNLEFLIECMDDLSMEQQKFQFYYRNLARQQTQQQAWLQKRRAENMARRQAGEDPLPEDDPNNAVFKLIPEPSRLDSYLITNQIANYCSQINGFAGQSFSKIYLMDAVHE 341          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A1W0A1S4_9STRA (Eukaryotic translation initiation factor 3 subunit H n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1S4_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.710e-41
Identity = 81/179 (45.25%), Postives = 117/179 (65.36%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQEGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQKS 180
            +KAYRLS+ F   Y+ +  + I+ S ILEE+PI++ N  I    + +LQ+     C+FDRLDL+TN YLE SL+ L  W D+L+ E  KF  Y R + +Q+ + A WLQKR++ N  R+  G+  LP+++ A  K +  P+R+ESLLI+ Q+  YC  IN+FAG SF KLFLA +L K+
Sbjct:  146 IKAYRLSETFQEQYKTQALKDIRSSNILEEIPIQLNNSEIAQCYLLELQKQSA--CEFDRLDLATNTYLENSLQNLSAWADELAQEHYKFQGYERAVAKQRTQIASWLQKRREENKIRQDNGEDLLPEEDPALFKPLNQPSRLESLLITKQMNTYCDNINRFAGKSFHKLFLADTLHKN 322          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A2K1KFZ9_PHYPA (Eukaryotic translation initiation factor 3 subunit H n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KFZ9_PHYPA)

HSP 1 Score: 150 bits (380), Expect = 2.990e-41
Identity = 86/182 (47.25%), Postives = 120/182 (65.93%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREKKNEVIKPSE-------ILEELPIKIRNPGIINALVFDLQ-EGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDE--FAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFL 173
            +KA +LS+ FM +YR +     K  E       I EE+P+KI N  ++++L+ +L+ E     CDFDRL LSTNP++EK+LEFL   +DDLS EQ KF  Y RNL RQ+ +Q  WLQKR+  N  RRA+G+ PLP++E      K +  P+R++S LI+NQI+ YC+Q+N FAG S  KL+L
Sbjct:  154 LKALKLSEDFMELYRSQSLSGEKLREKNMAWTHIFEEIPVKISNSALVSSLMTELEPEAPATQCDFDRLVLSTNPFMEKNLEFLIECMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKRRTENAARRASGEEPLPEEEPNNPVFKILPEPSRLDSYLITNQISNYCSQVNGFAGQSLSKLYL 335          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A1V9YES0_9STRA (Eukaryotic translation initiation factor 3 subunit H n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YES0_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.670e-41
Identity = 79/187 (42.25%), Postives = 121/187 (64.71%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYREK--------KNEVIKPSEILEELPIKIRNPGIINALVFDLQEGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQKS 180
            +KA+RL+ AF+  Y+ K        K + I+ + ++EE+PI++ N  ++   + +LQ     DC+FDRLDL+TN YLE SL+ L  W D+L+ E  KF  Y R + +Q+ +  +WL KR++ N  RR  G+ PLP+++ AF K +  P+R+ESLLI+ Q+  YC  IN++AG SF KLFLAG L ++
Sbjct:  150 IKAFRLTDAFLETYKTKAFSKEGFAKGD-IRAATMIEEIPIELHNSDMVQCYLLELQAQKLGDCEFDRLDLATNAYLENSLQNLSAWADELAQEHYKFQGYERAVAKQRAQYQQWLLKRREENKLRRDNGEEPLPEEDPAFAKGLNQPSRLESLLITKQMNTYCDNINRYAGKSFHKLFLAGHLHQT 335          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: A0A438HDS6_VITVI (Eukaryotic translation initiation factor 3 subunit H n=2 Tax=rosids TaxID=71275 RepID=A0A438HDS6_VITVI)

HSP 1 Score: 147 bits (371), Expect = 5.890e-41
Identity = 87/189 (46.03%), Postives = 124/189 (65.61%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYR------EKKNEV-IKPSEILEELPIKIRNPGIINALVFDLQEGDRV-DCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEFA--FDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQKS 180
            +KA +LS +FM +YR      EK  E  +   +I EE+PIK+ N  +I+A + +L+    V  CD+DRL LSTNPY+E++LEFL   +DDLS EQ KF  Y RNL RQ+ +Q  WLQKR+  N  R+ AG+ PLP+++ A    K +  P+R++S LI+NQI+ YC QIN  AG SF +L+L  +L ++
Sbjct:   57 LKALKLSDSFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPYMERNLEFLIECMDDLSMEQQKFQFYYRNLSRQQGQQQAWLQKRRAENMARKTAGEDPLPEEDPANPIFKPIPEPSRLDSFLITNQISNYCNQINGVAGQSFSRLYLMKALHEN 245          
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Match: M0ZZY1_SOLTU (Eukaryotic translation initiation factor 3 subunit H n=15 Tax=Solanaceae TaxID=4070 RepID=M0ZZY1_SOLTU)

HSP 1 Score: 149 bits (376), Expect = 1.070e-40
Identity = 89/190 (46.84%), Postives = 126/190 (66.32%), Query Frame = 0
Query:    2 MKAYRLSKAFMRVYR------EKKNEV-IKPSEILEELPIKIRNPGIINALVFDLQEGDRV-DCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQRQKLEQARWLQKRKQTNDERRAAGDVPLPDDEF---AFDKKMEMPNRMESLLISNQITAYCTQINKFAGSSFEKLFLAGSLQKS 180
            +KA +LS +FM +YR      EK  E  +   +I EE+PIK+ N  +I+A + +L+    V  CD++RL LSTNPYLE+++EFL   +DDLS EQ KF  Y RNL RQ+ +Q  WLQKR+  N  R+AAG+ PLP+++    AF K +  P+R++S LI+NQI  YC QIN  AG SF +L+L  +LQ++
Sbjct:  150 LKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYERLQLSTNPYLERNVEFLIECMDDLSMEQQKFQFYYRNLSRQQAQQQAWLQKRRSDNMARKAAGEEPLPEEDPSNPAF-KPIPEPSRLDSFLITNQIANYCNQINGVAGQSFSRLYLMKALQEN 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115571.1229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP68_9PHAE1.340e-9884.53Eukaryotic translation initiation factor 3 subunit... [more]
A0A836CJJ9_9STRA3.310e-7969.06Eukaryotic translation initiation factor 3 subunit... [more]
A0A6V1NQH4_HETAK1.810e-5654.14Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2RWA1_9STRA5.910e-4950.56Eukaryotic translation initiation factor 3 subunit... [more]
D8S8X2_SELML7.590e-4246.81Eukaryotic translation initiation factor 3 subunit... [more]
A0A1W0A1S4_9STRA2.710e-4145.25Eukaryotic translation initiation factor 3 subunit... [more]
A0A2K1KFZ9_PHYPA2.990e-4147.25Eukaryotic translation initiation factor 3 subunit... [more]
A0A1V9YES0_9STRA3.670e-4142.25Eukaryotic translation initiation factor 3 subunit... [more]
A0A438HDS6_VITVI5.890e-4146.03Eukaryotic translation initiation factor 3 subunit... [more]
M0ZZY1_SOLTU1.070e-4046.84Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePANTHERPTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDcoord: 2..178
IPR027524Eukaryotic translation initiation factor 3 subunit HPANTHERPTHR10410:SF3EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Hcoord: 2..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115571contigH-elongata_contig115571:587..1753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115571.1229.1mRNA_H-elongata_contig115571.1229.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115571 96..2032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115571.1229.1 ID=prot_H-elongata_contig115571.1229.1|Name=mRNA_H-elongata_contig115571.1229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MMKAYRLSKAFMRVYREKKNEVIKPSEILEELPIKIRNPGIINALVFDLQ
EGDRVDCDFDRLDLSTNPYLEKSLEFLCNWIDDLSNEQMKFNQYARNLQR
QKLEQARWLQKRKQTNDERRAAGDVPLPDDEFAFDKKMEMPNRMESLLIS
NQITAYCTQINKFAGSSFEKLFLAGSLQKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027524eIF3h