prot_H-elongata_contig114996.1196.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114996.1196.1
Unique Nameprot_H-elongata_contig114996.1196.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.300e-29
Identity = 66/143 (46.15%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M +VGVPVGTE FQR F+     G PAEL+R L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TS   IR +A+
Sbjct:  126 MAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5KFL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.010e-28
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M VVG+PVGTE+FQR+F+ K   G+PAEL+  L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D ++ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR +A+
Sbjct:    1 MPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 144          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.910e-27
Identity = 66/143 (46.15%), Postives = 85/143 (59.44%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M +VGVPVGTE FQR F+     G PAEL+R L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TS   IR +A+
Sbjct:  427 MAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5JP77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP77_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.450e-27
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIR 123
            M VVG+PVGTE+FQR F+ K   G+PA+L+  LV ++D QAS+Q+L L    RL +LLRT+ P  T  AA  +D L+ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR
Sbjct:    1 MPVVGIPVGTEEFQRKFVSKFARGDPADLILRLVTLDDPQASYQLLRLSGVPRLFHLLRTITPSFTISAAREHD-LMMWAMSKIVLGKMADSMRIPTDKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIR 139          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 6.850e-27
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M VVG+P GTE+FQR+F+ K   G+PAEL+  L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D ++ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR +A+
Sbjct:   93 MPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.150e-26
Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M +VGVPVGTE FQR F+     G PAEL+R L  ++D QAS+Q+L L    RL +LLRT  P +T  AA  +D L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGL +T    IR +A+
Sbjct:   93 MAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAF 235          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.640e-26
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M VVG+PVGTE+FQR+F+ K   G+PAEL+  L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D ++ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR +A+
Sbjct:  427 MPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.710e-26
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M VVG+PVGTE+FQR+F+ K   G+PAEL+  L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D ++ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR +A+
Sbjct:  427 MPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.730e-26
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE-----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M VVG+PVGTE+FQR+F+ K   G+PAEL+  L  ++D QAS+Q+L L    RL +LLRT+ P +T  AA  +D ++ WA++ I+ G  A +  +PT +E                 A  Q HLP+REGGLG+TS   IR +A+
Sbjct:  275 MPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 418          
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 7.320e-26
Identity = 63/143 (44.06%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYATSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALKQAHLPIREGGLGLTSRSSIRGAAY 127
            M +VGVPVGTE FQR F+     G PAEL+  L  ++D Q S+Q+L +    RL +LLRT+ P +T  AA  +D+L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TS   IR +A+
Sbjct:  275 MAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114996.1196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE5.300e-2946.15Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KFL6_9PHAE1.010e-2843.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGJ4_9PHAE1.910e-2746.15Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JP77_9PHAE4.450e-2744.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLD7_9PHAE6.850e-2742.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE1.150e-2644.76Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM0_9PHAE3.640e-2643.06Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE3.710e-2643.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE3.730e-2643.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE7.320e-2644.06Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114996contigH-elongata_contig114996:771..1202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114996.1196.1mRNA_H-elongata_contig114996.1196.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114996 771..1211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114996.1196.1 ID=prot_H-elongata_contig114996.1196.1|Name=mRNA_H-elongata_contig114996.1196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MRVVGVPVGTEQFQRDFLQKAVNGEPAELVRALVPIEDAQASFQILCLYA
TSRLSYLLRTVPPFLTCQAAANYDALVEWALASIIAGDGATAAGLPTPEE
ALKQAHLPIREGGLGLTSRSSIRGAAY
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