prot_H-elongata_contig11459.1161.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11459.1161.1
Unique Nameprot_H-elongata_contig11459.1161.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length539
Homology
BLAST of mRNA_H-elongata_contig11459.1161.1 vs. uniprot
Match: D7FWD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD3_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 9.620e-84
Identity = 241/585 (41.20%), Postives = 291/585 (49.74%), Query Frame = 0
Query:    1 RQVNKRALVNCRWTLRPVRPDGQSLPSSSGMEVSNMDCVFLEQDFFYMTKASHNASVVLKALLHNPRLSTAPSGSGGSTRGSVDKHSHDQAHYAVDRKGVFKLQVADTDELRPGGEKSAALMRKAKRGLKRSEARRQGHHRTYVHELRPEEDRLPSGAAFPREIRARATRFASESESRAICSMAGSSSLSRSRSFPYRGF---------------EGVKGEEGWGGEVDEGRGGSSSRMWTASSTISSSPSLVNNCGMAATVLESHARVLRDWRRRWQRFG----HRRRSRIKGLLANDEDIASSNIETFRETKRGEGLAPSPMCPRCRYLSNTNSLPTLSPLESTRPPSNLANGSP---------------------LGRYCLCSINREVQREVLRSPCASAFP---SSSPGAEITPPLSPAVSTMSNSGVTAVGGFDGESLAVNGADGAHRPFTPGLTPEITGASHSLEQRAHAASPLLAAGAAAAEADRGSSAM---SLPSWETSAALGLDEPGISPSRARRDSLGGNTNKTRDRWANRRKKEDQDPFRALGEILLDGFGLESIMRRLEQQDETLLKGVRRV 539
            R +NK A+VNCRWT+RPVR DGQSL    G EVSN+D V+LEQDFFYMT+ S NASVVLKAL HN R  +A          +  K    Q H+ V R+GVFKLQVAD DELRPG E+SAALMRKAKRGLKRSEARR GH RTYVH+ RP+ DRL SGAAFPREIR R T F SES SRAI      SS S S   P+RG                 GV     W G  D G G +     +  + +  + +     G    V  SHARVLR+W++RW   G           +G   +  D      +   +   G  L  SPMC RCRYL       T  PL    P   +   S                      LGRYCLC++NRE+Q EVL+   +       ++ PGA ++     A    S S  TA GG                     +     G   +LE    A  P+   GA+      G        L    +S  L L   G + +      +GG   + RDR A+RRKK+D  PF AL E LLDGF LESI +RL+QQDETL KGVR V
Sbjct:  506 RAMNKSAIVNCRWTVRPVRSDGQSLLGKDGKEVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNR--SAGXXXXXXXXXASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGH-RTYVHKQRPQ-DRLTSGAAFPREIRVRTTHFVSESASRAI------SSASHS---PHRGGGAXXXXXXXVVGYSRSGVSLGGSWDGFGDGGGGSAWLSAGSWGTDVLQAMTDFARAGAERGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGEGEDGGGDEGHGWSLV-SPMCSRCRYL-------TAHPLTPPPPAGTIGTCSSRSLSXXXXXXXXXXXDEAEVTLGRYCLCTVNREIQTEVLQGDASGGHARAATAEPGAALSVGTE-AGHEPSVSSPTAEGGXXXXXXXXXXXXXXXXXXXXXMNASEMGGELALEG---AGRPV--GGASERNTSLGGGXXCGGGLSRMPSSNTLALAAGGFA-AXXXXXXIGG-LKRARDRRADRRKKKD--PFEALEERLLDGFSLESITKRLQQQDETLQKGVRHV 1059          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11459.1161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWD3_ECTSI9.620e-8441.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11459contigH-elongata_contig11459:74..6999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11459.1161.1mRNA_H-elongata_contig11459.1161.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11459 74..6999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11459.1161.1 ID=prot_H-elongata_contig11459.1161.1|Name=mRNA_H-elongata_contig11459.1161.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=539bp
RQVNKRALVNCRWTLRPVRPDGQSLPSSSGMEVSNMDCVFLEQDFFYMTK
ASHNASVVLKALLHNPRLSTAPSGSGGSTRGSVDKHSHDQAHYAVDRKGV
FKLQVADTDELRPGGEKSAALMRKAKRGLKRSEARRQGHHRTYVHELRPE
EDRLPSGAAFPREIRARATRFASESESRAICSMAGSSSLSRSRSFPYRGF
EGVKGEEGWGGEVDEGRGGSSSRMWTASSTISSSPSLVNNCGMAATVLES
HARVLRDWRRRWQRFGHRRRSRIKGLLANDEDIASSNIETFRETKRGEGL
APSPMCPRCRYLSNTNSLPTLSPLESTRPPSNLANGSPLGRYCLCSINRE
VQREVLRSPCASAFPSSSPGAEITPPLSPAVSTMSNSGVTAVGGFDGESL
AVNGADGAHRPFTPGLTPEITGASHSLEQRAHAASPLLAAGAAAAEADRG
SSAMSLPSWETSAALGLDEPGISPSRARRDSLGGNTNKTRDRWANRRKKE
DQDPFRALGEILLDGFGLESIMRRLEQQDETLLKGVRRV
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