prot_H-elongata_contig11446.1151.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.170e-39 Identity = 91/279 (32.62%), Postives = 144/279 (51.61%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRPRDHGIIYGGEP------------------------GGGKLLAA---ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC I+RD AGT+ Q YI + ERF++ +TS IP+ S ++ ++ E +E +P+RE+VG LMW A TRP+ S + +A+ + P+ + W+AAQK L YL + Y + G +L +SWF Q+ + ++SE+EY+A+ + V E F+ + +F+ P I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 105 LGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFH 376
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE) HSP 1 Score: 145 bits (367), Expect = 7.400e-38 Identity = 91/279 (32.62%), Postives = 144/279 (51.61%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRPRDHGIIYGGEP------------------------GGGKLLAA---ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDV-TIKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF+V +TS IP+ S ++ ++ E + R +P+RE+VG+LMW A TRPDIS + +A+ + P+ +H +AAQK L YL + Y + G +L A ++W Q+ +++E+EYVA+ + V E F++ + EF+ P + I++ ED+EGAI +A H+D+ H+ +R+ E GV+ + +V S QHADI TK++ FE H
Sbjct: 96 LGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SLTNDYKSVMEDEGARDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHGKAAQKILNYLLEAAHLTLKYKQDTMVDVGTLVYVDADFASKATDRRSVSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGKIQVREDNEGAIALAENPLSSCNSKHIDVSHHFLRNLTEEGVLEIRHVSSEVQHADILTKALPRDPFEVH 367
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.930e-37 Identity = 93/279 (33.33%), Postives = 146/279 (52.33%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRP--------RDHGIIYG-----------------GEPGGGKLLAA--ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF++ +TS IP+ S ++ ++ E + +P+RE+VG+LMW A+ TR DIS + +A+ + P+ +HW+AAQK L YL RD + G G +AA + W Q+ + ++SESEY+A+ + V E F+ + +F+ P + I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 911 LGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPA-------SLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1182
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 149 bits (375), Expect = 5.000e-37 Identity = 92/279 (32.97%), Postives = 146/279 (52.33%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRP--------RDHGIIYG-----------------GEPGGGKLLAA--ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF++ +TS IP+ S ++ ++ E + +P+RE+VG+LMW A+ TR DIS + +A+ + P+ +HW+AAQK L YL RD + G G +AA + W Q+ + ++SE+EY+A+ + V E F+ + +F+ P + I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 1121 LGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPA-------SLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1392
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE) HSP 1 Score: 147 bits (372), Expect = 5.670e-37 Identity = 90/279 (32.26%), Postives = 144/279 (51.61%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRPRDHGIIYGGEP------------------------GGGKLLAA---ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDV-TIKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF+V +TS IP+ S ++ ++ E + +P+R++VG+LMW A TRPDIS + +A+ + P +HW+AAQK L YL + Y + G +L A ++W Q+ +++E+EYVA+ + V E F++ + EF+ P + I++ ED+EGAI +A H+D++H++ R+ E GV+ + +V S QHADI TK++ FE H
Sbjct: 381 LGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGKIQVREDNEGAIALAENPLSSCNSKHIDVRHHLFRNLTEEGVLEIRHVSSEGQHADILTKALPRGCFEVH 652
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.580e-36 Identity = 93/279 (33.33%), Postives = 149/279 (53.41%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYL---------WRPRDH----GIIYGGEPGGGK------------LLAA--ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF+V +TS IP+ S ++ ++ E + +P+RE+VG+LMW A TRPDIS + +A+ + P+ +HW+AAQK L YL ++P + ++Y K L+A+ + W Q+ + ++SE+EY+A+ + V E F+ + +F+ P I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 680 LGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 951
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.680e-36 Identity = 93/279 (33.33%), Postives = 149/279 (53.41%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYL---------WRPRDH----GIIYGGEPGGGK------------LLAA--ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF+V +TS IP+ S ++ ++ E + +P+RE+VG+LMW A TRPDIS + +A+ + P+ +HW+AAQK L YL ++P + ++Y K L+A+ + W Q+ + ++SE+EY+A+ + V E F+ + +F+ P I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 947 LGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 1218
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 146 bits (369), Expect = 3.150e-36 Identity = 89/279 (31.90%), Postives = 145/279 (51.97%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRPRDHGIIYGGEP------------------------GGGKLLAA---ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC +RD AGT+ Q YI ++ ERF++++TS IP+ S ++ ++ E +E +P+RE+VG LMW A TRP+ S + +A+ + P+ + W+AAQ+ L L + Y + G +L A +SWF Q+ + ++SE+EY+A+ + V E F+ + +F+ P I + ED+EGAI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 1000 LGCAFSRDREAGTIEISQESYIRSVLERFNISRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQRILSNLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEVH 1271
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE) HSP 1 Score: 139 bits (351), Expect = 5.880e-36 Identity = 90/279 (32.26%), Postives = 146/279 (52.33%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKALSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYL---------WRPRDH----GIIYGGEPGGGK------------LLAA--ISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVT-IKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTKSVDVKIFEKH 250
LGC RD AGT+ Q YI ++ ERF+V +TS IP+ S ++ ++ E + +P+RE+VG+LMW A TRPDIS + + + + P+ +HW+AAQK L YL ++P + ++Y K L+A+ + W Q+ + + SE+EY A+ + V + F+ + +F+ P + I + ED+E AI +A H+D++H+ +R+ E GV+ V +V S EQHADI TK++ +FE H
Sbjct: 49 LGCAFVRDREAGTIEISQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNALRAVVRHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSISEAEYFAMGDGVKKALFVNGMLQFLRPSANPRKIDVLEDNEEAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 320
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU) HSP 1 Score: 141 bits (355), Expect = 1.300e-35 Identity = 91/275 (33.09%), Postives = 139/275 (50.55%), Query Frame = 0
Query: 10 LGCHITRDWNAGTLTFDQHQYIHTMAERFSVTKTSIIPSVAGGKA-LSKSDSPQTDAEVKEMRHIPYREIVGALMWAATMTRPDISFSAHQLAKFNDNPEPTHWRAAQKALQYLWRPRDHGIIYGGEPGG--GKLLA---------------------AISWFPLVQEVTAAASSESEYVALAEMVNELRFLREVNEFMTPPIDVTIKIHEDSEGAIKMA----------HVDIKHNIVRDAIEGGVVHVEYVRSGEQHADIPTK---SVDVKIF 247
LG ++RD +A TL QH YI + RF+ I + + LSKS P++ A+V MR +PY+E +G+LM+AA TRPDI+F+ LA+F+ NP HW A ++ +YL + +IYGG G G + A AISW QE+ +++ESEYVA E +LR + + P+ +H DS+ AI + H+DI+++ +R +I+ G + + Y + + AD+ TK SV VK F
Sbjct: 159 LGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRGLEGYVDADGASQEHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIRYSIDAGSIRLLYCPTADMTADVLTKALPSVKVKHF 433 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11446.1151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig11446.1151.1 ID=prot_H-elongata_contig11446.1151.1|Name=mRNA_H-elongata_contig11446.1151.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bpback to top |