prot_H-elongata_contig114012.1118.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114012.1118.1
Unique Nameprot_H-elongata_contig114012.1118.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 4.890e-10
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    2 GKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQ 43
            GK AEADPLY+RAIEIGE TLG +HP +AT+L NRA LL +Q
Sbjct:  613 GKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLLGSQ 654          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 6.890e-10
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARL 39
            QGK  E DPLY+RAIEIGEKTLG +HP +AT L NRAR+
Sbjct:   50 QGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNNRARM 88          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.200e-9
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQV 44
            QGK AEADPLY+RAIE+ EK LG +HP +AT + NRA LL AQ 
Sbjct:  340 QGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELLRAQA 383          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.010e-8
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    8 DPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQVE 45
            DPL++RAIEIGEKTLG +HP +ATRL NRA LL AQ E
Sbjct:  258 DPLFLRAIEIGEKTLGPDHPDLATRLNNRAELLRAQGE 295          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.470e-8
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNR 36
            +GK AEADPLY+RAIEIGEK LG +HP +ATRL NR
Sbjct:  168 RGKYAEADPLYLRAIEIGEKMLGPDHPDLATRLNNR 203          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 7.210e-8
Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQV 44
            +G  AEADP  +RAIEIGEK LG EHP +A  L NRA LL AQ+
Sbjct:  643 EGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLRAQL 686          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.870e-7
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    2 GKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQ 43
            GK AEADPLY+RAI+IG+K LG +HP +A  L NRA LL  Q
Sbjct:   10 GKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLKKQ 51          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 2.550e-7
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    2 GKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQ 43
            G+  EADPLY+RAIE+GEK LG +HP +AT L N+A LL  Q
Sbjct:    8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLRKQ 49          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.180e-6
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQ 43
            QGK AEADPL +RA++IG+  LG +HP +A  LGNRA LL  Q
Sbjct:  553 QGKYAEADPLILRAMDIGKSPLGPDHPDLALWLGNRACLLGQQ 595          
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Match: D8LQL3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL3_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.000e-6
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSA 42
            QGK  EAD L +R IE+GE TLG +HP VA RL NRA LL A
Sbjct:  297 QGKYVEADRLCLRDIEMGEDTLGPDHPDVAIRLNNRAELLRA 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114012.1118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G6W2_ECTSI4.890e-1071.43NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LPW2_ECTSI6.890e-1071.79TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KSC7_9PHAE2.200e-965.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC1_9PHAE2.010e-873.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K0C4_9PHAE2.470e-875.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE7.210e-863.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L045_9PHAE1.870e-764.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLM3_ECTSI2.550e-761.90Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5K2T5_9PHAE2.180e-660.47PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E... [more]
D8LQL3_ECTSI3.000e-664.29TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..56
e-value: 1.1E-9
score: 39.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114012contigH-elongata_contig114012:316..558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114012.1118.1mRNA_H-elongata_contig114012.1118.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114012 316..612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114012.1118.1 ID=prot_H-elongata_contig114012.1118.1|Name=mRNA_H-elongata_contig114012.1118.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
QGKLAEADPLYVRAIEIGEKTLGAEHPTVATRLGNRARLLSAQVERRGRG
QGRRWEGQACTPHSRVLIFEKYQVFSPLDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf