prot_H-elongata_contig112725.1042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112725.1042.1
Unique Nameprot_H-elongata_contig112725.1042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5J747_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J747_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 8.660e-26
Identity = 50/117 (42.74%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   39 ELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSG 154
            +LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D+RLPK ++LG + GG G  GG++ +G
Sbjct:   10 QLKIRLLQAEVVETLLYGCASWSPTAEHYTKLNETHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQEXTG 126          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.730e-25
Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGA 144
            YDRP   PL LK+R+L+AEV+ T+LY C T + +   Y  L  AHH F+ +CIGW+     D P+S+    +  G  ES++  +R+R++ FAGFV  M D RLPK  +LGE+ GGA
Sbjct:  164 YDRPGG-PLRLKVRLLQAEVVETLLYGCVTWNLKPAEYRKLRSAHHFFLLRCIGWKKRERKDRPLSYAKALITAGCDESVEATVRKRRLCFAGFVARMRDERLPKIALLGELQGGA 278          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5K5W0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W0_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 9.780e-25
Identity = 64/172 (37.21%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGW---------GVFWKTSKLSVSTPTIGRLQPRMRGNGARLWNKGRN 191
            YDR   A  +LKIR+L+AEV+  +LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D+RLPK ++LG + GG G  GG++ S W            W+T +  V+    G+  PR R  G      GR+
Sbjct:   87 YDR-RRANRQLKIRLLQAEVVEHLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQE-SDWVSRLGEDLVASTWETKRKGVN----GKRAPRTRRCGTTRSRTGRH 252          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5JYP4_9PHAE (Myb_DNA-bind_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.240e-24
Identity = 57/127 (44.88%), Postives = 84/127 (66.14%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGW 155
            YDR   A  +LKIR+L+AEV+ T+LY C + S  V HY  L   H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+CM+D+RLPK ++LG + GG G  GG++ S W
Sbjct:   87 YDR-RRANRQLKIRLLQAEVVETLLYGCASWSLTVEHYTKLTGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMCMEDSRLPKRMLLGAMAGGVGYRGGQE-SDW 211          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 3.790e-24
Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGW 155
            YDR   A  +LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D+RLPK ++LG + GG G  GG++ S W
Sbjct:    2 YDR-RRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQE-SDW 126          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5L6M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M5_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.870e-24
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRK 151
            YDR   A  +LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D RLPK ++LGE+ GG    GG++
Sbjct:   30 YDR-RRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGEMAGGGEYRGGQE 151          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5L053_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L053_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.890e-24
Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGWGVFWKTSKLSV-STPTIGRLQ 175
            YDR   A  +LKIR+L+AEV+ T+LY   + +    HY  L   H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D+R PK ++LG + GG GC GG++ S W    +     V     +GR+Q
Sbjct:    2 YDR-RRADRQLKIRLLQAEVVETLLYGYASWNLTAEHYTKLKGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRRPKRMLLGAMAGGVGCRGGQE-SDWVSLLRFGAFIVPQREVVGRIQ 147          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.560e-23
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGW 155
            YDRP A    LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M D+RLPK ++LG + GG G   GR++S W
Sbjct:  157 YDRPRANR-PLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMKDSRLPKRMLLGAMAGGVG-YRGRQESDW 281          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5KSH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH7_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.950e-23
Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRKKSGW 155
            YDR   A  +LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW     +D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D RLPK ++LG + GG G  GG++ S W
Sbjct:   87 YDR-KRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQE-SDW 211          
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Match: A0A6H5JQG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG6_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.040e-23
Identity = 53/123 (43.09%), Postives = 79/123 (64.23%), Query Frame = 0
Query:   30 YDRPSAAPLELKIRMLKAEVLGTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTFMKTG-SESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGRK 151
            YDR   A  +LKIR+L+AEV+ T+LY C + S    HY  L+  H  F+T+CIGW      D P+S+    ++ G  E+I+  +R+R++ FAGFV+ M+D RLPK ++LG + GG G  GG++
Sbjct:    2 YDR-RRADRQLKIRLLQAEVVETLLYGCASWSLIAEHYTKLNGTHRQFLTRCIGWSKRKRLDRPLSNAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112725.1042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J747_9PHAE8.660e-2642.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2J8_9PHAE4.730e-2545.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W0_9PHAE9.780e-2537.21Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYP4_9PHAE3.240e-2444.88Myb_DNA-bind_7 domain-containing protein n=1 Tax=E... [more]
A0A6H5KGF6_9PHAE3.790e-2443.31Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6M5_9PHAE3.870e-2443.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L053_9PHAE5.890e-2438.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5J5_9PHAE1.560e-2344.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSH7_9PHAE1.950e-2343.31Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG6_9PHAE2.040e-2343.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112725contigH-elongata_contig112725:1082..1660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112725.1042.1mRNA_H-elongata_contig112725.1042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112725 582..2018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112725.1042.1 ID=prot_H-elongata_contig112725.1042.1|Name=mRNA_H-elongata_contig112725.1042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MLSFLLLSVAHPVYVFPVDTVSLEICLEPYDRPSAAPLELKIRMLKAEVL
GTILYSCDTRSSRVCHYDMLHRAHHGFVTQCIGWRNNNCTDHPISHLNTF
MKTGSESIKTIMRRRQILFAGFVVCMDDTRLPKCVMLGEIVGGAGCVGGR
KKSGWGVFWKTSKLSVSTPTIGRLQPRMRGNGARLWNKGRNV*
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