prot_H-elongata_contig112554.1022.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI) HSP 1 Score: 184 bits (468), Expect = 7.190e-52 Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 0
Query: 5 CQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
CQDQ FFMHG LF ARQR+YDVPVAVDVL+GG+YP LPKGIEYCGGD+DPRPIFELPANR EI+ RVDRAIRLALLRRGGVP+QFT+H V NG+LTL V+GEF++
Sbjct: 106 CQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVLRVDRAIRLALLRRGGVPNQFTSHTVKNGVLTLTVNGEFEL 210
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.070e-18 Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 0
Query: 14 GALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIF--ELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
G LF ARQR +DVP A+DVL G YPRLP GI +CG D D + + P R +L RVDRA+RLALL R P+ FT+ V G L L V EF++
Sbjct: 116 GGLFGARQRPFDVPAALDVLGSGTYPRLPLGIPWCGMDQDESSLVPTDTPEQRASVLARVDRALRLALLVREPFPAGFTSRAVRRGCLYLEVAHEFEL 213
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: UPI0020095A09 (mediator of RNA polymerase II transcription subunit 14-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020095A09) HSP 1 Score: 72.8 bits (177), Expect = 1.260e-12 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0
Query: 1 CGWQCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
C Q D +FFMH L +AR +YDVP A++VL+ G Y RLPK +E G + PA L ++D +R LL +P +FT VS+G++TL VDGEF++
Sbjct: 91 CFTQAADSMFFMHEGLQQARAPIYDVPSAIEVLLTGNYQRLPKCVEDVGMLGTLNEDQQGPA-----LKKLDTLVRSKLLEVS-LPKEFTEIRVSDGVVTLRVDGEFKI 193
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A4D9BXU0_SALSN (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BXU0_SALSN) HSP 1 Score: 70.9 bits (172), Expect = 6.110e-12 Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0
Query: 1 CGWQCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
C Q D +FFMH L +AR +YDVP A++VL+ G Y RLPK +E G + PA L ++D +R LL +P +FT VS+G++TL V+GEF++
Sbjct: 91 CFTQAADSMFFMHEGLQQARAPIYDVPSAIEVLLTGNYQRLPKCVEDVGMLGTLNEDQQGPA-----LKKLDTLVRSKLLEVS-LPKEFTEIRVSDGVVTLRVNGEFKI 193
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A830D088_9LAMI (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D088_9LAMI) HSP 1 Score: 70.9 bits (172), Expect = 6.120e-12 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0
Query: 1 CGWQCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
C Q D +FFMH L +AR +YDVP A+++L+GG Y RLPK IE G + PA L +++ +R LL +P + T V +G+++L VDGEF+V
Sbjct: 91 CFTQAADSMFFMHEGLQQARAPIYDVPSAIEILLGGTYQRLPKCIEDVGTQSTLNEDQQGPA-----LKKLETLVRSKLLEIS-LPKEITEIKVYDGVVSLRVDGEFKV 193
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A2U1QFK7_ARTAN (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QFK7_ARTAN) HSP 1 Score: 69.3 bits (168), Expect = 2.120e-11 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 0
Query: 1 CGWQCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
C Q D +FFMH L +AR +YDVP A+++L+ G Y RLPK C DV + + +L ++D +R LL +P +F+ +S+G +TL V GEF+V
Sbjct: 90 CFTQAADSMFFMHEGLQQARAPIYDVPSAIEILLTGTYERLPK----CTEDVGIQSTLTEKQQK-PVLKKLDTLVRSKLLETA-LPKEFSEVKISDGTVTLIVQGEFKV 192
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: S8E9Y8_9LAMI (Mediator of RNA polymerase II transcription subunit 14 (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E9Y8_9LAMI) HSP 1 Score: 67.8 bits (164), Expect = 7.350e-11 Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0
Query: 1 CGWQCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
C Q D +FFMH L +AR +YDVP A+++L+ G Y RLPK IE G + PA R ++D +R LL +P + + VS+G+++L DGEF+V
Sbjct: 91 CFTQAADSMFFMHEGLQQARAPIYDVPSAIEILLSGTYQRLPKCIEDVGTQNTLTEDQQGPALR-----KLDTLVRSKLLDVS-LPKELSRVSVSDGVVSLRADGEFEV 193
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: F0W2P3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2P3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.000e-9 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0
Query: 4 QCQDQLFFMHGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRL-EILPRVDRAIRLALLRRGGVPSQFTTHVVSNGILTLFVDGEFQV 109
+ D+LFFMH L RA++RMYD+ A+DVL G Y RLP IE + PR E P + L + ++ IR L++ +P QFT+ + +G + G+F++
Sbjct: 95 ETNDRLFFMHANLDRAKERMYDLSTAIDVLYKGSYLRLPSVIERA---MYPR---EFPPHNLTKTADTLNNLIRYRLIQ-SNIPKQFTSISLDHGFVYFTCSGQFEI 194
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A085LYE7_9BILA (Mediator of RNA polymerase II transcription subunit 14 n=3 Tax=Trichuris TaxID=36086 RepID=A0A085LYE7_9BILA) HSP 1 Score: 51.6 bits (122), Expect = 3.400e-5 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0
Query: 7 DQLFFM-HGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGV-PSQFTTHVVSNGILTLFVDGEFQVS 110
D+LF + + L AR + +P+AVDVL G YPRL + IE V P I PA I R+++ ++ ++ + G+ P + VS+G+ T V GEF+V+
Sbjct: 116 DRLFQLCNTVLLSARLPAFQIPIAVDVLTLGTYPRLSRAIEQRF--VPPEKIT--PAELQSITRRLNQVVKRRIVSQLGILPKRMRCFEVSDGMATFCVAGEFEVT 217
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Match: A0A5S6R235_TRIMR (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6R235_TRIMR) HSP 1 Score: 50.4 bits (119), Expect = 8.620e-5 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = 0
Query: 7 DQLFFM-HGALFRARQRMYDVPVAVDVLVGGKYPRLPKGIEYCGGDVDPRPIFELPANRLEILPRVDRAIRLALLRRGGV-PSQFTTHVVSNGILTLFVDGEFQVS 110
D+LF + + L AR + VP+AVDVL G YPRL K IE V P I P+ + R+++ ++ ++ + V P + + VS+G++T V GEF+ +
Sbjct: 116 DRLFQLCNSVLLNARLPAFQVPIAVDVLTLGTYPRLSKAIEQRF--VPPEKIT--PSELQSVTRRLNQIVKRRIISQLAVLPKRMRSFEVSDGMVTFRVAGEFEAT 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112554.1022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig112554.1022.1 ID=prot_H-elongata_contig112554.1022.1|Name=mRNA_H-elongata_contig112554.1022.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|