prot_H-elongata_contig109774.787.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109774.787.1
Unique Nameprot_H-elongata_contig109774.787.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A6H5JMW3_9PHAE (GTP_cyclohydro2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMW3_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 9.200e-22
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +V GSKRCDC+EQLD+SLRYIQE GGG VIYLAQEGRGIGLANKVAAYALQ
Sbjct:  186 EVLGSKRCDCREQLDMSLRYIQEHGGGVVIYLAQEGRGIGLANKVAAYALQ 236          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A7S2MR06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MR06_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.440e-19
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VFGS+RCDCKEQL+++L Y+QE GG AVIYL QEGRGIGLANKVAAYALQ
Sbjct:   16 EVFGSRRCDCKEQLNMALEYVQEHGG-AVIYLQQEGRGIGLANKVAAYALQ 65          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A835ZEW2_9STRA (GTP cyclohydrolase II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.690e-18
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +V GS+RCDCKEQLD +LR+IQE GG AVIYL QEGRGIGLANKVAAYALQ
Sbjct:  136 EVLGSRRCDCKEQLDAALRHIQEHGG-AVIYLQQEGRGIGLANKVAAYALQ 185          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A0G4G8S0_9ALVE (GTP cyclohydrolase II n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G8S0_9ALVE)

HSP 1 Score: 82.8 bits (203), Expect = 3.120e-17
Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VFGS+RCDCKEQLD++L ++Q K GGAV+YL QEGRGIGLANK+AAYALQ
Sbjct:  246 EVFGSRRCDCKEQLDLALDFVQ-KDGGAVVYLQQEGRGIGLANKIAAYALQ 295          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A7S3V7I7_9STRA (GTP cyclohydrolase II n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7I7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.750e-17
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VFGSKRCDCKEQL ++L Y+ E GG AVIYL QEGRGIGLANKVAAYALQ
Sbjct:  164 EVFGSKRCDCKEQLKMALEYVDEHGG-AVIYLQQEGRGIGLANKVAAYALQ 213          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A7S1G170_9STRA (GTP cyclohydrolase II n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G170_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.940e-17
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VFGS RCDCKEQL++S +YIQE GG  VIYL QEGRGIGLANKVAAYALQ
Sbjct:  258 EVFGSLRCDCKEQLEMSFKYIQENGG-LVIYLQQEGRGIGLANKVAAYALQ 307          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A7S4RWR3_9STRA (GTP cyclohydrolase II n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RWR3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.460e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VF S+RCDCKEQL +SL YIQ K GGA+IYL QEGRGIGLANKVAAYALQ
Sbjct:  162 EVFRSQRCDCKEQLKMSLEYIQ-KNGGAIIYLQQEGRGIGLANKVAAYALQ 211          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A7S4VFR0_9STRA (GTP cyclohydrolase II n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFR0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.480e-16
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VF S+RCDCKEQL +SL YIQ K GGA+IYL QEGRGIGLANKVAAYALQ
Sbjct:  162 EVFRSQRCDCKEQLKMSLEYIQ-KNGGAIIYLQQEGRGIGLANKVAAYALQ 211          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: B7FTK6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTK6_PHATC)

HSP 1 Score: 76.6 bits (187), Expect = 1.750e-16
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +VF S+RCDCKEQL ++L YIQ K GG +IYL QEGRGIGLANKVAAYALQ
Sbjct:   14 EVFRSQRCDCKEQLHMALLYIQ-KHGGCIIYLQQEGRGIGLANKVAAYALQ 63          
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Match: A0A836CJG3_9STRA (GTP cyclohydrolase II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.950e-16
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYALQ 51
            +V GS+RCDC+EQLD SL++IQ  GG AVIYL QEGRGIGLANKVAAYALQ
Sbjct:  127 EVLGSQRCDCREQLDASLKHIQAHGG-AVIYLQQEGRGIGLANKVAAYALQ 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109774.787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMW3_9PHAE9.200e-2288.24GTP_cyclohydro2 domain-containing protein n=2 Tax=... [more]
A0A7S2MR06_9STRA1.440e-1980.39Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A835ZEW2_9STRA7.690e-1882.35GTP cyclohydrolase II-domain-containing protein n=... [more]
A0A0G4G8S0_9ALVE3.120e-1776.47GTP cyclohydrolase II n=1 Tax=Chromera velia CCMP2... [more]
A0A7S3V7I7_9STRA5.750e-1780.39GTP cyclohydrolase II n=4 Tax=Chaetoceros debilis ... [more]
A0A7S1G170_9STRA7.940e-1780.39GTP cyclohydrolase II n=1 Tax=Corethron hystrix Ta... [more]
A0A7S4RWR3_9STRA1.460e-1680.39GTP cyclohydrolase II n=2 Tax=Ditylum brightwellii... [more]
A0A7S4VFR0_9STRA1.480e-1680.39GTP cyclohydrolase II n=3 Tax=Ditylum brightwellii... [more]
B7FTK6_PHATC1.750e-1676.47Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A836CJG3_9STRA1.950e-1678.43GTP cyclohydrolase II-domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032677GTP cyclohydrolase IIPFAMPF00925GTP_cyclohydro2coord: 2..51
e-value: 2.4E-18
score: 66.3
IPR036144RibA-like superfamilyGENE3D3.40.50.10990coord: 1..51
e-value: 4.1E-21
score: 76.9
IPR036144RibA-like superfamilySUPERFAMILY142695RibA-likecoord: 2..51
NoneNo IPR availablePANTHERPTHR21327GTP CYCLOHYDROLASE II-RELATEDcoord: 2..51
NoneNo IPR availablePANTHERPTHR21327:SF35coord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109774contigH-elongata_contig109774:288..440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109774.787.1mRNA_H-elongata_contig109774.787.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109774 288..440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109774.787.1 ID=prot_H-elongata_contig109774.787.1|Name=mRNA_H-elongata_contig109774.787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
QVFGSKRCDCKEQLDISLRYIQEKGGGAVIYLAQEGRGIGLANKVAAYAL
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032677GTP_cyclohydro_II
IPR036144RibA-like_sf