prot_H-elongata_contig10891.724.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10891.724.1
Unique Nameprot_H-elongata_contig10891.724.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1093
Homology
BLAST of mRNA_H-elongata_contig10891.724.1 vs. uniprot
Match: A0A6H5KXY0_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 7.180e-32
Identity = 96/181 (53.04%), Postives = 118/181 (65.19%), Query Frame = 0
Query:  796 GGYYDYRE---RGGSGRVASASRRNEDEYSGYPSGSRALVPRNAHSYSSGMLEVREQGLQLVKGAWARVLVGTGRTRAVLRDYGDWAGTAASNAGVKIKSTVGSVTNRVADVLEGDPQGVTGPYGQPPRRDGYYGGSISSPTPDRTG--QNYPRSWGPVTPPSGY--GFAPQTGANPQAAP 969
            GGYY   +   +G  G    + ++   EY G+P+GSRALVP N  +   G LEV+EQGLQLVKGAWAR+LVG  +TRA L D  + AG AAS A  KIK+T+GSVT+RVADVLEGDPQG+ GPYGQPP+   YYG     P     G  Q +PRSW    P +GY  G  P+ G +P+AAP
Sbjct:  445 GGYYGRNDGYYQGPPGGNGGSRQQGNAEYGGFPAGSRALVPNNGGAPRGG-LEVKEQGLQLVKGAWARILVGKDKTRAALHDAKEKAGVAASTATYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQD--YYG----EPRMGAGGGQQQHPRSW-QGAPQNGYREGGVPRPGQDPRAAP 617          
BLAST of mRNA_H-elongata_contig10891.724.1 vs. uniprot
Match: D8LJY1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY1_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 5.720e-31
Identity = 95/181 (52.49%), Postives = 117/181 (64.64%), Query Frame = 0
Query:  796 GGYYDYRE---RGGSGRVASASRRNEDEYSGYPSGSRALVPRNAHSYSSGMLEVREQGLQLVKGAWARVLVGTGRTRAVLRDYGDWAGTAASNAGVKIKSTVGSVTNRVADVLEGDPQGVTGPYGQPPRRDGYYGGSISSPTPDRTGQNY--PRSWGPVTPPSGY--GFAPQTGANPQAAP 969
            GGYY   +   +G  G   + +++   EY G+P+GSRALVP N  +   G LEV+EQGLQLVKGAWAR+LVG  +T A L +  + AG AAS A  KIK+T+GSVT+RVADVLEGDPQG+ GPYGQPP+ D YYG     P     GQ    PRSW    P +GY  G  P  G +P+AAP
Sbjct:  499 GGYYGRNDGYYQGPPGGNGAPTQQGNAEYGGFPAGSRALVPSNGGAPRGG-LEVKEQGLQLVKGAWARILVGKDKTTAALYEAKEKAGIAASTASYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQED-YYG----EPGMGAGGQQQQDPRSW-QGAPQNGYREGGVPHPGQDPRAAP 672          
BLAST of mRNA_H-elongata_contig10891.724.1 vs. uniprot
Match: A0A835Z5N4_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.380e-7
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0
Query:  830 ALVP--RNAHSYSSGMLEVREQGLQLVKGAWARVLVGTGRTRAVL---RDYGDWAGTAASN--------AGVKIKSTVGSVTNRVADVLEGDPQGVTGPYGQP 919
            ALVP  R   S   G   VR+ GLQLV+GAW R+LVG  R  A+L   R+       AAS         AG +++ TVG VT RV  +L+ + + V GPYG P
Sbjct:  511 ALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPP 613          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10891.724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KXY0_9PHAE7.180e-3253.04WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LJY1_ECTSI5.720e-3152.49WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835Z5N4_9STRA9.380e-742.72WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 111..143
e-value: 3.2E-4
score: 30.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 110..143
score: 13.22
NoneNo IPR availableGENE3D2.20.70.10coord: 108..167
e-value: 5.4E-8
score: 34.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..1092
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.758
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 104..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10891contigH-elongata_contig10891:808..7331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10891.724.1mRNA_H-elongata_contig10891.724.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10891 735..8001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10891.724.1 ID=prot_H-elongata_contig10891.724.1|Name=mRNA_H-elongata_contig10891.724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1093bp
MVEKSGLSLSLALTLLAAAHALQGGNPRAGGSTTPYNRYEQSYNPRYHQG
PGQVQHQQPQHQHHQEEQRNPEPQSQNRHQHQQQQHGTTAIVSPSSEAAE
GVVAPQIERPPLPYGWGELRAGDGRPYYVYYPNGTVQWERPAPPKDPDSE
QQQTRGSAERGQPPLPAEVTTADKAYDVTEFATGISGEREITDRGGGAIQ
NRVEEDVKILVGESEMSDAEGPEGNMGDGNELRNIAESVRAKATSLNQHT
PTEAERREGQAAGEQEYPPSADVEPIIFGGASLPDSATIADSFQRQQNHG
VRVEGDGDGDKDGRSRDSSPPDSWSAQIQISPATSAHNKHWQTSPSPMSP
QRIQPPDASEEPPQPWNGATSSTLAERLAHSGESKPPPMPITGESRQPNP
ALPPSTRGSRSGQEQQSLPLPQQPVHNPWGGSSSFGDTTVANARDESRRG
PPQDLNERRGETRVPGQEWGSNGISNPWTGDSRRGLGYVERPVGESGSDG
SDRDGAGPGSVRSPGGRFWTQSHNGAPPVSHQRPMGESGNDGSGRDGAGP
GSVRSPGGGSWTQSQYRTPPVSHQRPIGESGSDGAGRYGAGPGAVGSPRE
GSWTQSQYVAPSASHQRPMEESGSDGAGRDGAGPGAVGSPGGEFRAQSQY
GAPPVNYQQPQPGRTNAGGAYEEPFSHQDSRFQTNRADTWGSGGSEPRSG
PNSLGWEHQHPTPDQGSSEWKTGHQLLGSAPVAGNRPGAGDGPTWWSSSA
QSGMPEGEGYGRYGGAQETWEEQRGRWGMEGHDHRQTLEGNSGYDGGYYD
YRERGGSGRVASASRRNEDEYSGYPSGSRALVPRNAHSYSSGMLEVREQG
LQLVKGAWARVLVGTGRTRAVLRDYGDWAGTAASNAGVKIKSTVGSVTNR
VADVLEGDPQGVTGPYGQPPRRDGYYGGSISSPTPDRTGQNYPRSWGPVT
PPSGYGFAPQTGANPQAAPPPGSYNGGDRYSDSRQKNPHPGDAERGARGR
YAGGTAVHPHSQQGSPSPKSTFEGGREPRVVRDRQGGPVAAGPGVGAGSG
MPSYGGQQRQPSQQQQRRGEGQERTGQWQRDGVSDGGYWAPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf