prot_H-elongata_contig108418.686.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108418.686.1
Unique Nameprot_H-elongata_contig108418.686.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length355
Homology
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BLAST of mRNA_H-elongata_contig108418.686.1 vs. uniprot
Match: D7FPM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM4_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 8.970e-79
Identity = 181/425 (42.59%), Postives = 237/425 (55.76%), Query Frame = 0 
Query:    8 LDWRQGLEILREAKRAGVSFTPEVMLILLTKVPPGNSRKISRVVTADLSRLYGLEASS-DMLAVAAVAHWRAGVVTGASRLLDEM--------KEIPASPSPLVQDWMAKEAQHVYAASRSVAVGATRP-----RRWTWQLVVVDIYGRAGRWAKAAEAFDTFVVE----------------------------------------------SFGSATASNPTLGRLPLPEEPGGDLMTADGVAAAAEL--------WASIHPSPLAHAVTAYIKLNKVDGAARTLSFLRTSLSASVPSVATNGVNPAAIPTNNEGRRDNFGG---DDKLPLGPP--DPAWMTLAVRGFARLGRWGMIMEVLCPEICGWASDDSGSE--NNERARGFQL--ALSSLESFLEHKSRAKRPAPGQIAEVKSCLETME 355
            LDWR+ LE+++EA  AGV   P++M ++L+KVP GNSRKISR+V+   SR +GL+AS+ DMLAVAAVAHWR GVVTGA+R LDEM        KE+ ASPS LVQ+W+A + Q +  A+ + AV  T P     R+W W+LV VDIYGRA RWA AAEAFD F+ +                                              +  SA  + PT  RLPLPEE G           A E         W S HPS +AHA+TAY+KL +V+ AA  LSFL+ S+ A   + A  G++P  +  + EG    +GG    D    GPP  DP WM   VRGF R G+W M +EVL  +I  W S ++G +  + +   G +L  A  SLE+FLE K  AK+PA GQ+A  K+CLE ++
Sbjct:  221 LDWRRALEVIKEAHLAGVEVRPDLMALVLSKVPVGNSRKISRLVSNKGSRAFGLQASTPDMLAVAAVAHWREGVVTGAARHLDEMFARIKKLNKEMVASPSSLVQEWLAADRQRIRDAAAAAAV-ETPPSHPPERQWPWRLVAVDIYGRANRWAAAAEAFDAFIGDMGFPSSRNGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVSARIAKPT--RLPLPEEFGXXXXXXXXXXKAGEFSSPLPLQAWLSFHPSAIAHAITAYLKLGRVEEAAEVLSFLKASVRAGGATPAAGGLSPGYVGGSEEG--GGYGGRAGSDPSLSGPPTVDPGWMEGTVRGFTRAGKWDMALEVLSTDIVAWFSAETGGDRRSGDGGGGARLVAASESLEAFLEAKLXAKKPASGQVAGSKACLELLK 640
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108418.686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPM4_ECTSI8.970e-7942.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108418contigH-elongata_contig108418:262..2037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108418.686.1mRNA_H-elongata_contig108418.686.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108418 262..2037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108418.686.1 ID=prot_H-elongata_contig108418.686.1|Name=mRNA_H-elongata_contig108418.686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=355bp
MGDISGHLDWRQGLEILREAKRAGVSFTPEVMLILLTKVPPGNSRKISRV
VTADLSRLYGLEASSDMLAVAAVAHWRAGVVTGASRLLDEMKEIPASPSP
LVQDWMAKEAQHVYAASRSVAVGATRPRRWTWQLVVVDIYGRAGRWAKAA
EAFDTFVVESFGSATASNPTLGRLPLPEEPGGDLMTADGVAAAAELWASI
HPSPLAHAVTAYIKLNKVDGAARTLSFLRTSLSASVPSVATNGVNPAAIP
TNNEGRRDNFGGDDKLPLGPPDPAWMTLAVRGFARLGRWGMIMEVLCPEI
CGWASDDSGSENNERARGFQLALSSLESFLEHKSRAKRPAPGQIAEVKSC
LETME
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