prot_H-elongata_contig107488.617.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107488.617.1
Unique Nameprot_H-elongata_contig107488.617.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 8.520e-29
Identity = 62/99 (62.63%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    1 QAVASYAAAVDMFRGVGERDIAEID--DEMTSEDMAVMQALLEEDENEPNAIFMAEDESLDYDGMLELGSAIGDVRQERWRLRSKAVINSLPRVKYYTG 97
            +A+ASYAAAVD FR             + +  EDMA MQAL+EEDEN P+A  MAEDESLDYDGMLELGSAIGDVR++RWR+R K+VI +LPRV Y  G
Sbjct:   47 EAMASYAAAVDNFRSAAXXXXXXXGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPRVSYTAG 145          
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.680e-27
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 0
Query:    1 QAVASYAAAVDMFRGVGERDIAEID--DEMTSEDMAVMQALLEEDENEPNAIFMAEDESLDYDGMLELGSAIGDVRQERWRLRSKAVINSLPRVKYYTG 97
            +A+ASYAAAVD FR       A     D +  EDMA MQAL+EEDEN P+A  MAEDESLDYDGMLELGSAIGDVR++RWR+R K+VI +LP+V Y  G
Sbjct:  217 EAMASYAAAVDNFRSAAAAARAAGGGLDGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPQVSYTAG 315          
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Match: A0A836C9F1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.380e-7
Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    5 SYAAAVDMFRGVGERDIAEIDDEMTSEDMAVMQALLEEDENEPNAIFMAEDES------LDYDGMLELGSAIGDVRQERWRLRSKAVINSLPR 91
            SY A +D  R    + +   D+ M   D+  M+  + E++ +   +   E+E       ++YD +LELG AIGDV+QERWRLR+ A I  LPR
Sbjct:   67 SYQAGMDALRAA--QGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPR 157          
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Match: A0A7S0GIG7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIG7_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.620e-6
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    1 QAVASYAAAVDMFRGVGERDIAEIDDEMTSEDMAVMQALLEEDENEPNAIFMAED---ESLDYDGMLELGSAIGDVRQERWRLRSKAVINSL 89
            +AVASY+ +   F+     D A   D  +SED+A +QA LEEDE + N I    D     L YD +L LG  IGDV+QERW   +  +I+ +
Sbjct:   50 EAVASYSMSSTFFQ-----DNA---DNYSSEDLAALQAALEEDEFDENEIEEDADVDTSDLSYDALLMLGERIGDVKQERWTHIANGIIDKM 133          
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Match: A0A7S2P243_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P243_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-5
Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 0
Query:    5 SYAAAVDMFRGVGERDIAEIDDEMTSEDMAVMQALLEEDENEPNAIFM------AEDESLDYDGMLELGSAIGDVRQERWRLRSKAVINSLPRVKY 94
            SYA + D  R        E  ++ ++ED A +QA + E++  PNA  +       ED  L YD ML +   +GDV+ ERW L+SK  I  LP+  Y
Sbjct:  189 SYAVSADFLR--------ENANQFSTEDFAALQAAMAEED--PNAGELDEVGDSEEDSELSYDTMLRIAERVGDVKTERWVLKSKDEIEKLPKFVY 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107488.617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FY13_ECTSI8.520e-2962.63Ring finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KY69_9PHAE7.680e-2763.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836C9F1_9STRA2.380e-737.63RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S0GIG7_9STRA3.620e-641.30Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2P243_9STRA5.980e-536.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107488contigH-elongata_contig107488:444..2118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107488.617.1mRNA_H-elongata_contig107488.617.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107488 444..2118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107488.617.1 ID=prot_H-elongata_contig107488.617.1|Name=mRNA_H-elongata_contig107488.617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
QAVASYAAAVDMFRGVGERDIAEIDDEMTSEDMAVMQALLEEDENEPNAI
FMAEDESLDYDGMLELGSAIGDVRQERWRLRSKAVINSLPRVKYYTGRIA
IDDSK*
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