prot_H-elongata_contig106788.557.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106788.557.1
Unique Nameprot_H-elongata_contig106788.557.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A6H5KP90_9PHAE (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP90_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.570e-33
Identity = 95/266 (35.71%), Postives = 113/266 (42.48%), Query Frame = 0
Query:    8 GVTYPTNRVKDCYTRALKERGLTEACFSSSSQKVFSLGGMYRRCLDPQVPTAMVRCSPQFAVKNMSSCCRCPRNGFVAMNASFPPRMHDASSRGFYRLIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAG-----------------------------------------------------SGLKLAGSS----------------------------GRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLN 192
            GVTYPTN VK+CYT+AL+ERG+TEACFSSS+QK F LGG YRR                                                      L+Q+PKDM WE+K YD+HTLHLINTDIDDLLDI+DA+IA                                                      S  K  G S                            GR+  LCL FTLPS+SYATMC+RE+T+QDT T + +SLN
Sbjct:  786 GVTYPTNGVKECYTKALEERGVTEACFSSSTQKAFKLGGAYRR------------------------------------------------------LLQVPKDMQWELKRYDDHTLHLINTDIDDLLDIDDARIAKEDAERKXXXXXXXXXXXXADPSSXXXXXXXXXXXXXXXXDPAAAEADVEKQPPSTKKEEGDSKATTPDAMDVDGAAPESKCEASPPGSRGGRFHGLCLHFTLPSSSYATMCLREVTQQDTSTIYHTSLN 997          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A162NNX6_9CRUS (Pseudouridylate synthase 7 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A162NNX6_9CRUS)

HSP 1 Score: 72.0 bits (175), Expect = 3.480e-11
Identity = 47/108 (43.52%), Postives = 62/108 (57.41%), Query Frame = 0
Query:  101 GFYRLIQM-PKDMTWEMKLYDNHTLHLINTDIDDL----LDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLNPPGSTQQPSMA 203
            G YRL+   P D+ W+   YD+ TL LI +D D L    L + D K            G Y  L L+F+LP++SYATM +REITK D  + FQ+SLN  GST+ P+ A
Sbjct:  585 GAYRLVMSKPSDVKWKFARYDDPTLSLIPSDWDRLQKTQLPLADVK-----------DGVYLGLILEFSLPASSYATMALREITKMDMSSEFQTSLNEAGSTKHPAPA 681          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A6P8SK60_GEOSA (pseudouridylate synthase 7 homolog isoform X1 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SK60_GEOSA)

HSP 1 Score: 65.5 bits (158), Expect = 5.890e-9
Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   93 RMHDASSRGFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLN 192
            ++ D S  G YR +I  P++++WE+ +Y++  + L+ TD+D        K+    L +    G+Y AL L+F+LP ++YATM IRE+ K DT    Q+ LN
Sbjct:  550 KIRDYSLAGAYRKIIIRPQNVSWELVVYEDPKVPLVQTDVD--------KLERKPLPVFAKEGKYQALKLEFSLPPSTYATMAIREVLKMDTSIKNQTRLN 642          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A067R2F7_ZOONE (Pseudouridylate synthase 7-like protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R2F7_ZOONE)

HSP 1 Score: 65.5 bits (158), Expect = 6.390e-9
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
Query:  102 FYRLIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLN 192
            + R+I  P+++TW+   Y + T  LI +D+D+L ++ + K    GL        Y AL L F LPSA+YATM +REI K DT +  Q+SLN
Sbjct:  808 YRRMIVRPENLTWKTMQYSSLTSTLIQSDLDELKNVPEPKDDPEGL--------YKALILDFCLPSATYATMALREILKVDTSSIHQASLN 890          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A067TMS5_GALM3 (TRUD domain-containing protein n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067TMS5_GALM3)

HSP 1 Score: 63.9 bits (154), Expect = 2.100e-8
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   89 SFPPRMHDASSRGFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSL 191
            +F  +  D +  G YR +I +PKD++W +  Y +  + L  +D D LL  +   +         S G++ AL +  TL +A+YATM +REITK DT + FQ+SL
Sbjct:  728 NFVRKQKDYTLGGSYRAMIHLPKDLSWSVLRYTDPDVSLAQSDEDKLLGFDSPAVV--------SDGKFMALQINITLGTAAYATMALREITKTDTSSHFQTSL 823          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: N6TL72_DENPD (TRUD domain-containing protein (Fragment) n=3 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TL72_DENPD)

HSP 1 Score: 63.2 bits (152), Expect = 3.730e-8
Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 0
Query:  101 GFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLN 192
            G YR ++Q  KD+ W++  Y++ T +LI +D+++L  +++ +          + G+Y A+ L F+LPSA YATM +REI K +T TS Q+ LN
Sbjct:  559 GTYRKIVQHVKDLEWKILCYNDPTDNLIRSDLEELSGVKEPETI--------AEGQYKAIVLSFSLPSACYATMVLREILKCNTSTSSQAGLN 643          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A0D2LPZ5_HYPSF (TRUD domain-containing protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2LPZ5_HYPSF)

HSP 1 Score: 62.4 bits (150), Expect = 7.060e-8
Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 0
Query:   89 SFPPRMHDASSRGFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSL 191
            +F  +  D +  G YR ++  PK+M+W +  Y +  + L  +D D LLD +   +           G++ AL +  TL +A+YATM +REITK DT + FQ+SL
Sbjct:  720 NFVRKQKDYTLNGSYRAMLHHPKEMSWSVLRYTDPDVSLAQSDEDKLLDFDPPAVV--------EDGKFMALQIHLTLGTAAYATMALREITKTDTSSHFQTSL 815          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: W4KF10_HETIT (TRUD domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KF10_HETIT)

HSP 1 Score: 62.0 bits (149), Expect = 9.630e-8
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 0
Query:   89 SFPPRMHDASSRGFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLNPPGSTQQ 199
            +F  R  D S  G YR ++ +P++++W++  Y +  + L  +D D LL  +   I           GR+ AL ++ TL +A+YATM +RE+TK +T + FQSSL      QQ
Sbjct:  764 NFNRRQKDYSLSGSYRNIMHLPRELSWDVLRYTDPDVPLAQSDEDKLLGYDAPAIV--------PDGRFLALQIRLTLGTAAYATMALREVTKTETSSHFQSSLTQASQDQQ 867          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: B4LFS9_DROVI (TRUD domain-containing protein n=2 Tax=virilis group TaxID=32335 RepID=B4LFS9_DROVI)

HSP 1 Score: 61.2 bits (147), Expect = 1.670e-7
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 0
Query:  101 GFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSL 191
            G YR L+    D+ W  + Y  H   LI +D + L +IE         + A S G YTAL L+FTLP+A YATM +RE+ KQDT T+ Q  L
Sbjct:  576 GAYRKLLIQTDDLKWSFRRYSTHEDTLIASDWEQLKNIEVTP------EPAESEGEYTALLLEFTLPTAVYATMFLRELFKQDTSTASQMQL 661          
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Match: A0A166VPZ6_9AGAM (tRNA pseudouridine synthase D n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166VPZ6_9AGAM)

HSP 1 Score: 61.2 bits (147), Expect = 1.750e-7
Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   89 SFPPRMHDASSRGFYR-LIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLAGSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSL 191
            +F  +  + +  G YR ++Q+PKD++W +  Y +  + L   D D LL  +   +A          G++ AL ++ TL +A+YATM +RE+TK DT + FQS+L
Sbjct:  744 NFVRKQKEYTLGGSYRKIMQLPKDLSWSVLRYTDPDVPLAQADEDKLLGFDAPVLA--------EDGKFMALQIRLTLNTAAYATMALREVTKTDTSSHFQSNL 839          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106788.557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP90_9PHAE2.570e-3335.71TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A162NNX6_9CRUS3.480e-1143.52Pseudouridylate synthase 7 n=2 Tax=Daphnia magna T... [more]
A0A6P8SK60_GEOSA5.890e-936.63pseudouridylate synthase 7 homolog isoform X1 n=2 ... [more]
A0A067R2F7_ZOONE6.390e-941.76Pseudouridylate synthase 7-like protein n=1 Tax=Zo... [more]
A0A067TMS5_GALM32.100e-836.54TRUD domain-containing protein n=1 Tax=Galerina ma... [more]
N6TL72_DENPD3.730e-838.71TRUD domain-containing protein (Fragment) n=3 Tax=... [more]
A0A0D2LPZ5_HYPSF7.060e-835.58TRUD domain-containing protein n=1 Tax=Hypholoma s... [more]
W4KF10_HETIT9.630e-834.82TRUD domain-containing protein n=1 Tax=Heterobasid... [more]
B4LFS9_DROVI1.670e-743.48TRUD domain-containing protein n=2 Tax=virilis gro... [more]
A0A166VPZ6_9AGAM1.750e-734.62tRNA pseudouridine synthase D n=1 Tax=Fibularhizoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 140..183
e-value: 1.6E-5
score: 26.5
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 7..197
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 7..197
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 7..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106788contigH-elongata_contig106788:219..1091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106788.557.1mRNA_H-elongata_contig106788.557.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106788 219..1091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106788.557.1 ID=prot_H-elongata_contig106788.557.1|Name=mRNA_H-elongata_contig106788.557.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
LCVLSRFGVTYPTNRVKDCYTRALKERGLTEACFSSSSQKVFSLGGMYRR
CLDPQVPTAMVRCSPQFAVKNMSSCCRCPRNGFVAMNASFPPRMHDASSR
GFYRLIQMPKDMTWEMKLYDNHTLHLINTDIDDLLDIEDAKIAGSGLKLA
GSSGRYTALCLKFTLPSASYATMCIREITKQDTGTSFQSSLNPPGSTQQP
SMA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR020103PsdUridine_synth_cat_dom_sf