prot_H-elongata_contig10397.335.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10397.335.1
Unique Nameprot_H-elongata_contig10397.335.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.840e-7
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++ +S TQ   +LSTSE +Y+A  +GVK ALF +AVL F+ PE +   I +
Sbjct:  241 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKV 296          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5KEE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE4_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.860e-7
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV+N  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:  372 VGGTVVNHGSNTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQV 427          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.900e-7
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++ +S TQ   +LSTSE +Y+A  +GVK ALF +AVL F+ PE +   I +
Sbjct: 1116 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKV 1171          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.900e-7
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++ +S TQ   +LSTSE +Y+A  +GVK ALF +AVL F+ PE +   I +
Sbjct: 1669 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKV 1724          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5KX24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX24_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.550e-7
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++EV+YVA  +GVK ALF +AVL F+ PE +  +I +
Sbjct: 1001 VGGTVVSHGSKTQSILSLSSTEVEYVAAGEGVKEALFVRAVLSFVAPETSGSSIQV 1056          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.500e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQV 152          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.670e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQV 157          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5JAE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAE1_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 9.030e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:  612 VGGTVVSQGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQV 667          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5KGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY9_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 9.890e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:  124 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKV 179          
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Match: A0A6H5KQ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ35_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.180e-6
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 IGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPELASETIDL 57
            +GGTV++  S TQ   +LS++E +Y+A  +GVK ALF +AVL F+ PE +  +I +
Sbjct:  202 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQV 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10397.335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K6_9PHAE1.840e-748.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEE4_9PHAE1.860e-746.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE1.900e-748.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE1.900e-748.21Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX24_9PHAE3.550e-748.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE8.500e-744.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM0_9PHAE8.670e-744.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAE1_9PHAE9.030e-744.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGY9_9PHAE9.890e-744.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ35_9PHAE1.180e-644.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10397contigH-elongata_contig10397:1832..2008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10397.335.1mRNA_H-elongata_contig10397.335.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10397 1377..2462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10397.335.1 ID=prot_H-elongata_contig10397.335.1|Name=mRNA_H-elongata_contig10397.335.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MIGGTVMNASSTTQHCATLSTSEVKYVAMAQGVKTALFTKAVLGFLQPEL
ASETIDLF*
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