prot_H-elongata_contig10383.323.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE) HSP 1 Score: 114 bits (285), Expect = 3.050e-28 Identity = 63/88 (71.59%), Postives = 70/88 (79.55%), Query Frame = 0
Query: 1 MIRRDMLRAMRHSLSPTEERVLRLRFGLEGGGKRA------GALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGLLLAYADLV 82
++RRDM+RAM+ LSPTEER LRLRFGL G K GALTFKEIGR MELSAEGIR+M R+IAKLQ SDEANGLLLAYADL+
Sbjct: 352 VVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI) HSP 1 Score: 113 bits (282), Expect = 4.090e-28 Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0
Query: 1 MIRRDMLRAMRHSLSPTEERVLRLRFGLEGGGKRA------GALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGLLLAYADLV 82
++RRDM+RAM+ LSPTEER LRLRFGL G K GALTFKEIGR MELSAEGIR+M R+IAKLQ SDEANGLLL+YADL+
Sbjct: 294 VVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A352WXP4_9FIRM (RNA polymerase sigma factor RpoD (Fragment) n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A352WXP4_9FIRM) HSP 1 Score: 52.0 bits (123), Expect = 9.540e-7 Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 0
Query: 4 RDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQ 66
R+ L + H+L+P EE+VL+LRFGLE G R T +E+G+ +++ E IRQ+ +A+ KL+
Sbjct: 31 REQLEEVLHTLTPREEQVLKLRFGLEDGRNR----TLEEVGKVFDITRERIRQIEAKALRKLR 89
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A7G2EHY7_ARATH (RNA polymerase sigma factor n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2EHY7_ARATH) HSP 1 Score: 53.5 bits (127), Expect = 2.330e-6 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 4 RDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGLLLAYADLV 82
R+ +R + + LSP E R+++LRFG++GG +R+ EIG LS E +RQ+ RA+ +L+ + ++GL AYADL+
Sbjct: 419 RNHVRNLLNVLSPKERRIIKLRFGIDGGKQRS----LSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLH-AYADLL 492
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: SIGF_ARATH (RNA polymerase sigma factor sigF, chloroplastic n=21 Tax=Brassicaceae TaxID=3700 RepID=SIGF_ARATH) HSP 1 Score: 53.5 bits (127), Expect = 2.340e-6 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 4 RDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGLLLAYADLV 82
R+ +R + + LSP E R+++LRFG++GG +R+ EIG LS E +RQ+ RA+ +L+ + ++GL AYADL+
Sbjct: 473 RNHVRNLLNVLSPKERRIIKLRFGIDGGKQRS----LSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLH-AYADLL 546
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A1I3K083_9FIRM (RNA polymerase sigma factor SigA n=2 Tax=unclassified Oscillospiraceae TaxID=473772 RepID=A0A1I3K083_9FIRM) HSP 1 Score: 53.1 bits (126), Expect = 3.070e-6 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0
Query: 4 RDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGL 74
R+ L + H+L+P EE+VLRLRFGLE G R T +E+G++ ++ E IRQ+ +A+ KL+ + L
Sbjct: 287 REQLGEVLHTLTPREEKVLRLRFGLEDGRSR----TLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKL 353
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A0G2SWT4_9ROSI (Sigma factor n=1 Tax=Pelargonium tetragonum TaxID=122197 RepID=A0A0G2SWT4_9ROSI) HSP 1 Score: 53.1 bits (126), Expect = 3.210e-6 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
Query: 2 IRRDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGL 74
+++D+ R + SLSP E+ V+RLRFGL+G L KEIG M +S E IRQM L A KL+++ + L
Sbjct: 494 MKQDLDRLLNSSLSPKEQEVIRLRFGLDG----ERMLGLKEIGEMMSVSRERIRQMQLCAFRKLKNNKKTESL 562
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A354MVG3_9FIRM (RNA polymerase sigma factor RpoD (Fragment) n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A354MVG3_9FIRM) HSP 1 Score: 52.0 bits (123), Expect = 3.550e-6 Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 4 RDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGL 74
R+ L + H+L+P EE+V++LRFGLE G R T +E+GR+ +++ E IRQ+ +A+ KL+ + L
Sbjct: 107 REQLCNILHTLTPREEQVIKLRFGLEDGRPR----TLEEVGRQFQITRERIRQIEAKALRKLRHPSRSKTL 173
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A2A7A5A1_9FIRM (RNA polymerase sigma factor SigA n=13 Tax=Faecalibacterium TaxID=216851 RepID=A0A2A7A5A1_9FIRM) HSP 1 Score: 52.8 bits (125), Expect = 4.210e-6 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 1 MIRRDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGLLLAYAD 80
++RR++L ++ SL+P EERV+ LRFGLE G R T +E+G++ ++ E +RQ+ +A+ KL+ A LL Y D
Sbjct: 286 LLRRELLHVLK-SLTPREERVITLRFGLEDGRAR----TLEELGKEFNVTRERVRQIEAKALRKLRHPSRAK-LLRDYLD 359
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Match: A0A316LTS7_9FIRM (RNA polymerase sigma factor SigA n=2 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A316LTS7_9FIRM) HSP 1 Score: 52.8 bits (125), Expect = 4.230e-6 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 0
Query: 1 MIRRDMLRAMRHSLSPTEERVLRLRFGLEGGGKRAGALTFKEIGRKMELSAEGIRQMALRAIAKLQDSDEANGL 74
M+ R+ L + H+L+P EE VL+LRFGLE G R T +E+G+ E++ E IRQ+ +A+ KL+ + L
Sbjct: 293 MMLREQLLEVLHTLTPREESVLKLRFGLEDGRPR----TLEEVGKVFEITRERIRQIEAKALRKLRHPSRSKRL 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10383.323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig10383.323.1 ID=prot_H-elongata_contig10383.323.1|Name=mRNA_H-elongata_contig10383.323.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bpback to top |