prot_H-elongata_contig103808.321.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 253 bits (647), Expect = 5.190e-77 Identity = 121/297 (40.74%), Postives = 189/297 (63.64%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ L + H D QAF A L+E++++RL +GC + S K+V+ + Y LKQ+GR+W L E G EQ KA+PC+FRKM + V D I+V+G D C + + L + FP K GE + CA ERD + G + I+Q + ++++ ++ + + S+IPASPG+D+GP+ + E+GG R +GS+MW+S RPDI+ A+RA RH+H P HWKA+++I AY+ T+++G+ + RGSGL L+V+ D
Sbjct: 68 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPV---REAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVD 360
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.540e-75 Identity = 118/297 (39.73%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S +I + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ E + + CA ERD + G + I+Q + ++M+ ++ + + S IPASPG+DLGP+ + E GG R +GS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 359 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPV---REAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 651
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.040e-74 Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S KI + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 805 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1097
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.770e-74 Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S KI + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 1184 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1476
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.790e-74 Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S KI + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 1204 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1496
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.800e-74 Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S KI + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 1347 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1639
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.350e-72 Identity = 118/297 (39.73%), Postives = 189/297 (63.64%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA +K++ AN+ + + H D QA A L+EE++++L +GC S KIV+ Y LKQ+ R+W L L E G E+ KA+ C+FRKMV+ V +++ ++ DDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP E E GG R +GS+MWMS RPD++ A+RA RH+H+P HW A+ + Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 691 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVEN-GFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDEEGGEWPV---REAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQRGSGLGLAVYVD 983
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 250 bits (639), Expect = 5.830e-72 Identity = 120/297 (40.40%), Postives = 189/297 (63.64%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
+VA+ F+Q+PNVDY ++SP P+SA + ++ AN+ + + H D QA A L+EE++ RL +GC S +IV+ + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD + G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S RPD++ A RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL SV+ D
Sbjct: 914 VVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---RKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGPSVYVD 1206
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 242 bits (618), Expect = 1.940e-70 Identity = 115/296 (38.85%), Postives = 188/296 (63.51%), Query Frame = 0
Query: 2 VAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
VA+ F+Q+ ++ ++SP P+SA +K++ AN+ + + H D QA+ A L+EE++++L +GC S KI + + Y LKQ+GR+W L E G EQ KA+PC+FRKMV+ V +++ ++VDDI+V+G + C++ + L ++FP K+ GE + + CA ERD G + I+Q + ++M+ ++ + + S IPA+PG DLGP+ E + GG R VGS+MW+S RPD++ A+RA RH+H P HW A+ +I Y+ T+++G+ + RGSGL L+V+ D
Sbjct: 397 VARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPV---REAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 688
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE) HSP 1 Score: 232 bits (591), Expect = 3.090e-70 Identity = 120/298 (40.27%), Postives = 189/298 (63.42%), Query Frame = 0
Query: 1 MVAKLFTQMPNVDYHETTSPTPASAPVK-IIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
MVA+ F+Q+P +D+ ++S P++A +K +IAVA K + L H D QA++ A L EEIY+ GCS +SGK+V++ + Y LKQ+GREW L E G EQ + +PC+FRK+V+G+V ++ ++VDDI+V+ + ++ F+ L ++FPVK GE Y CA D +NGI +++Q + E+M+ ++ +T ++ IPA+ DLGP+ + E ++ R +G LMW + RPDIA L + +H+PT W AL++I +Y+N TK+ G+ +VRGSGL L+VF D
Sbjct: 1 MVARGFSQIPGIDFRHSSSACPSAASIKTVIAVATEKGKKLA-HWDVKQAYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRFDVTTIAFIPAATDADLGPKRDDEPAVDKPV---REAIGCLMWTK-LTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLNVFVD 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig103808.321.1 ID=prot_H-elongata_contig103808.321.1|Name=mRNA_H-elongata_contig103808.321.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bpback to top |