prot_H-elongata_contig103808.321.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103808.321.1
Unique Nameprot_H-elongata_contig103808.321.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length298
Homology
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 5.190e-77
Identity = 121/297 (40.74%), Postives = 189/297 (63.64%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  L + H D  QAF  A L+E++++RL +GC + S K+V+  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKM +  V        D I+V+G  D C +  + L + FP K  GE   +  CA ERD + G + I+Q  + ++++ ++ + + S+IPASPG+D+GP+ + E+GG       R  +GS+MW+S   RPDI+ A+RA  RH+H P   HWKA+++I AY+  T+++G+ + RGSGL L+V+ D
Sbjct:   68 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPV---REAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVD 360          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.540e-75
Identity = 118/297 (39.73%), Postives = 193/297 (64.98%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S +I +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+  E + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPASPG+DLGP+ + E GG       R  +GS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct:  359 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPV---REAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 651          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.040e-74
Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S KI +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E E GG       R  +GS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct:  805 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1097          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.770e-74
Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S KI +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E E GG       R  +GS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct: 1184 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1476          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.790e-74
Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S KI +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E E GG       R  +GS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct: 1204 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1496          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.800e-74
Identity = 120/297 (40.40%), Postives = 193/297 (64.98%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S KI +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E E GG       R  +GS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct: 1347 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 1639          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 4.350e-72
Identity = 118/297 (39.73%), Postives = 189/297 (63.64%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA +K++   AN+  + + H D  QA   A L+EE++++L +GC   S KIV+     Y LKQ+ R+W  L    L E  G E+ KA+ C+FRKMV+  V +++ ++ DDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP  E E GG       R  +GS+MWMS   RPD++ A+RA  RH+H+P   HW A+  +  Y+  T+++G+ + RGSGL L+V+ D
Sbjct:  691 LVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVEN-GFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDEEGGEWPV---REAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQRGSGLGLAVYVD 983          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 5.830e-72
Identity = 120/297 (40.40%), Postives = 189/297 (63.64%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            +VA+ F+Q+PNVDY  ++SP P+SA + ++   AN+  + + H D  QA   A L+EE++ RL +GC   S +IV+  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD + G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E E GG       R  +GS+MW+S   RPD++ A RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL  SV+ D
Sbjct:  914 VVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPV---RKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGPSVYVD 1206          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 1.940e-70
Identity = 115/296 (38.85%), Postives = 188/296 (63.51%), Query Frame = 0
Query:    2 VAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            VA+ F+Q+ ++    ++SP P+SA +K++   AN+  + + H D  QA+  A L+EE++++L +GC   S KI +  +  Y LKQ+GR+W       L E  G EQ KA+PC+FRKMV+  V +++ ++VDDI+V+G  + C++  + L ++FP K+ GE + +  CA ERD   G + I+Q  + ++M+ ++ + + S IPA+PG DLGP+ E + GG       R  VGS+MW+S   RPD++ A+RA  RH+H P   HW A+ +I  Y+  T+++G+ + RGSGL L+V+ D
Sbjct:  397 VARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPV---REAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVD 688          
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 3.090e-70
Identity = 120/298 (40.27%), Postives = 189/298 (63.42%), Query Frame = 0
Query:    1 MVAKLFTQMPNVDYHETTSPTPASAPVK-IIAVAANKLRLLVFHLDESQAFVQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLTEMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSELKERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALRACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD 297
            MVA+ F+Q+P +D+  ++S  P++A +K +IAVA  K + L  H D  QA++ A L EEIY+    GCS +SGK+V++ +  Y LKQ+GREW       L E  G EQ + +PC+FRK+V+G+V  ++ ++VDDI+V+ +    ++ F+ L ++FPVK  GE   Y  CA   D +NGI +++Q  + E+M+ ++ +T ++ IPA+   DLGP+ + E   ++     R  +G LMW   + RPDIA  L    + +H+PT   W AL++I +Y+N TK+ G+ +VRGSGL L+VF D
Sbjct:    1 MVARGFSQIPGIDFRHSSSACPSAASIKTVIAVATEKGKKLA-HWDVKQAYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRFDVTTIAFIPAATDADLGPKRDDEPAVDKPV---REAIGCLMWTK-LTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLNVFVD 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103808.321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE5.190e-7740.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE1.540e-7539.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE1.040e-7440.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.770e-7440.40Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.790e-7440.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.800e-7440.40Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JJY0_9PHAE4.350e-7239.73CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JQW4_9PHAE5.830e-7240.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE1.940e-7038.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE3.090e-7040.27Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..199
e-value: 4.4E-31
score: 108.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..269
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103808contigH-elongata_contig103808:461..1354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103808.321.1mRNA_H-elongata_contig103808.321.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103808 67..1360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103808.321.1 ID=prot_H-elongata_contig103808.321.1|Name=mRNA_H-elongata_contig103808.321.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp
MVAKLFTQMPNVDYHETTSPTPASAPVKIIAVAANKLRLLVFHLDESQAF
VQAPLEEEIYMRLLSGCSKLSGKIVRLLKCQYDLKQAGREWHLLLVRWLT
EMMGMEQSKAEPCIFRKMVNGKVSLMVGVHVDDIIVSGESDVCDDFFSEL
KERFPVKHQGELKMYTDCAFERDWKNGIIEINQKTFAENMITQYGITAVS
NIPASPGMDLGPRVEGETGGNEEFGDYRAIVGSLMWMSVMKRPDIANALR
ACVRHSHNPTAWHWKALLQIAAYINATKEIGLRFVRGSGLRLSVFAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like