prot_H-elongata_contig103790.320.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103790.320.1
Unique Nameprot_H-elongata_contig103790.320.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.480e-52
Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            +L   A  ++  L +FD +QAF+++D+DE  ++ +P+   +  G + +LNK++YGL Q  R W+      +  +GF Q   D CVFR + +    V +VV VDDI +  + +   D+F  +L     +K++GD R+Y GC   R+  A  LKI Q  Y E +  +F V+ G +I    G+  LS+ D+       EE+  +P+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H +A + I  Y++   D  I +  G    L M+ + D+++      RRS+ G +++   G ISW+SR Q+
Sbjct:   23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 322          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.160e-51
Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            ML   A   + +L +FD EQAF++++++E  Y+ +P+      G + +L K++YGL Q  R W+      + A+GFEQ   D CVFR + D    +++VV VDDI A  + +   D+F  +L +   +K++G+ R+Y GC   RN++   L I Q  + + +  ++ V  G  +  +SGV  LS  D        E   +FP+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H  A M I  Y      + I++     E   ++ Y D++F      RRS+ G ++    G +SW+SR Q+
Sbjct:   47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 346          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 8.910e-51
Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            +L   A  ++  L +FD +QAF+++D+DE  ++ +P+   +  G + +LNK++YGL Q  R W+      +  +GF Q   D CVFR + +    V +VV VDDI +  + +   D+F  +L     +K++GD R+Y GC   R+  A  LKI Q  Y E +  +F V+ G +I    G+  LS+ D+       EE+  +P+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H +A + I  Y++   D  I +  G    L M+ + D+++      RRS+ G +++   G ISW+SR Q+
Sbjct:  197 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 496          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A085MUK1_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MUK1_9BILA)

HSP 1 Score: 182 bits (461), Expect = 6.050e-50
Identity = 111/321 (34.58%), Postives = 177/321 (55.14%), Query Frame = 0
Query:    2 LLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRN-----PKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAY-----GGQGCE------LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQ 306
            +L  A  +D E+  FD + AFL   IDE  +++ P  Y    G V +L +AIYGL Q  R WNK+F+  + ++   +A+ D CV+    + +  V++ + VDD L     K T+     +L  +F++  +GD  YY+G  I R+R+ + + I Q  Y+E ++EKF+V+    +A     P  S    S+      P E +EM + PY+ A G+LM+    +RPDI+     V++F +NPGPAH KAV +I +Y+   K+ R+ +     G +G E      L + A+ DS++   +D+RRS  G VLIL  G +SW +R+Q
Sbjct:   39 ILAMAAEEDLEVLQFDVKTAFLHGIIDEVVFMDQPPHYDDQTGRVCKLQRAIYGLKQAPRAWNKRFHDFLLSLNLRRAEADQCVYVSEKESDERVILTLYVDDGLICCSEKGTLSTMVMKLMNEFEI-TVGDPSYYIGLEIHRDRRNKSIVIGQKAYIERILEKFNVQDCKPVAC----PWESSMKHSKGMSPTAPDESKEMSRIPYKAAVGSLMFLMTCSRPDISFETSKVSQFSENPGPAHWKAVKRIFRYIKGTKELRLVFRSKSEGDKGQEGTKCDSLQLTAFCDSDWPGDIDSRRSTSGYVLILCGGPVSWSTRVQ 354          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.070e-49
Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            +L   A  ++  L +FD +QAF+++D+DE  ++ +P+   +  G + +LNK++YGL Q  R W+      +  +GF Q   D CVFR + +    V +VV VDDI +  + +   D+F  +L     +K++GD R+Y GC   R+  A  LKI Q  Y E +  +F V+ G +I    G+  LS+ D+       EE+  +P+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H +A + I  Y++   D  I +  G    L M+ + D+++      RRS+ G +++   G ISW+SR Q+
Sbjct:  718 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 1017          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.940e-49
Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
            ++L  A  K   L+++D +QA+  A +DE+ ++++P         + +  +AIYGL Q+GR W       +   GFEQ K DPCVFRK+VD+   +++V+ VDDIL     +   +  A+ L +KF  K++G+ +++ GC I R+ +A  L+I Q  Y++SMVE+FDVK  S+I AT G     K       +E EE  ++P REA G++MW    +RPD++ A+RAVAR    P   H  A+ KI  YL   +D  I Y  +G  L +  Y D+++    D RRS+ G    +   V+S  S+ Q +
Sbjct:  833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1130          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.120e-49
Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
            ++L  A  K   L+++D +QA+  A +DE+ ++++P         + +  +AIYGL Q+GR W       +   GFEQ K DPCVFRK+VD+   +++V+ VDDIL     +   +  A+ L +KF  K++G+ +++ GC I R+ +A  L+I Q  Y++SMVE+FDVK  S+I AT G     K       +E EE  ++P REA G++MW    +RPD++ A+RAVAR    P   H  A+ KI  YL   +D  I Y  +G  L +  Y D+++    D RRS+ G    +   V+S  S+ Q +
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1509          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.170e-49
Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
            ++L  A  K   L+++D +QA+  A +DE+ ++++P         + +  +AIYGL Q+GR W       +   GFEQ K DPCVFRK+VD+   +++V+ VDDIL     +   +  A+ L +KF  K++G+ +++ GC I R+ +A  L+I Q  Y++SMVE+FDVK  S+I AT G     K       +E EE  ++P REA G++MW    +RPD++ A+RAVAR    P   H  A+ KI  YL   +D  I Y  +G  L +  Y D+++    D RRS+ G    +   V+S  S+ Q +
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1672          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.310e-49
Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            ML   A   + +L +FD EQAF++++++E  Y+ +P+      G + +L K++YGL Q  R W+      + A+GFEQ   D CVFR + D    +++VV VDDI A  + +   D+F  +L +   +K++G+ R+Y GC   RN++   L I Q  + + +  ++ V  G  +  +SGV  LS  D        E   +FP+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H  A M I  Y      + I++     E   ++ Y D++F      RRS+ G ++    G +SW+SR Q+
Sbjct: 1383 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 1682          
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.320e-49
Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query:    1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
            ML   A   + +L +FD EQAF++++++E  Y+ +P+      G + +L K++YGL Q  R W+      + A+GFEQ   D CVFR + D    +++VV VDDI A  + +   D+F  +L +   +K++G+ R+Y GC   RN++   L I Q  + + +  ++ V  G  +  +SGV  LS  D        E   +FP+RE  G+LMW    TRPDIA+A+RAVAR+C +P   H  A M I  Y      + I++     E   ++ Y D++F      RRS+ G ++    G +SW+SR Q+
Sbjct: 1169 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 1468          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE3.480e-5234.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE1.160e-5134.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE8.910e-5134.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A085MUK1_9BILA6.050e-5034.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE2.070e-4934.74Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KSG8_9PHAE2.940e-4936.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.120e-4936.04Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.170e-4936.04Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5J4N2_9PHAE4.310e-4934.09Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE4.320e-4934.09Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..171
e-value: 4.6E-30
score: 105.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 40..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103790contigH-elongata_contig103790:682..1653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103790.320.1mRNA_H-elongata_contig103790.320.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103790 485..1710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103790.320.1 ID=prot_H-elongata_contig103790.320.1|Name=mRNA_H-elongata_contig103790.320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLN
KAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVV
RVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARE
LKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRK
FPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYL
LHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVIS
WYSRMQEVSIVPQRRSTLLYQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2