prot_H-elongata_contig103790.320.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 187 bits (474), Expect = 3.480e-52 Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
+L A ++ L +FD +QAF+++D+DE ++ +P+ + G + +LNK++YGL Q R W+ + +GF Q D CVFR + + V +VV VDDI + + + D+F +L +K++GD R+Y GC R+ A LKI Q Y E + +F V+ G +I G+ LS+ D+ EE+ +P+RE G+LMW TRPDIA+A+RAVAR+C +P H +A + I Y++ D I + G L M+ + D+++ RRS+ G +++ G ISW+SR Q+
Sbjct: 23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 322
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.160e-51 Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
ML A + +L +FD EQAF++++++E Y+ +P+ G + +L K++YGL Q R W+ + A+GFEQ D CVFR + D +++VV VDDI A + + D+F +L + +K++G+ R+Y GC RN++ L I Q + + + ++ V G + +SGV LS D E +FP+RE G+LMW TRPDIA+A+RAVAR+C +P H A M I Y + I++ E ++ Y D++F RRS+ G ++ G +SW+SR Q+
Sbjct: 47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 346
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 8.910e-51 Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
+L A ++ L +FD +QAF+++D+DE ++ +P+ + G + +LNK++YGL Q R W+ + +GF Q D CVFR + + V +VV VDDI + + + D+F +L +K++GD R+Y GC R+ A LKI Q Y E + +F V+ G +I G+ LS+ D+ EE+ +P+RE G+LMW TRPDIA+A+RAVAR+C +P H +A + I Y++ D I + G L M+ + D+++ RRS+ G +++ G ISW+SR Q+
Sbjct: 197 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 496
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A085MUK1_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MUK1_9BILA) HSP 1 Score: 182 bits (461), Expect = 6.050e-50 Identity = 111/321 (34.58%), Postives = 177/321 (55.14%), Query Frame = 0
Query: 2 LLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRN-----PKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAY-----GGQGCE------LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQ 306
+L A +D E+ FD + AFL IDE +++ P Y G V +L +AIYGL Q R WNK+F+ + ++ +A+ D CV+ + + V++ + VDD L K T+ +L +F++ +GD YY+G I R+R+ + + I Q Y+E ++EKF+V+ +A P S S+ P E +EM + PY+ A G+LM+ +RPDI+ V++F +NPGPAH KAV +I +Y+ K+ R+ + G +G E L + A+ DS++ +D+RRS G VLIL G +SW +R+Q
Sbjct: 39 ILAMAAEEDLEVLQFDVKTAFLHGIIDEVVFMDQPPHYDDQTGRVCKLQRAIYGLKQAPRAWNKRFHDFLLSLNLRRAEADQCVYVSEKESDERVILTLYVDDGLICCSEKGTLSTMVMKLMNEFEI-TVGDPSYYIGLEIHRDRRNKSIVIGQKAYIERILEKFNVQDCKPVAC----PWESSMKHSKGMSPTAPDESKEMSRIPYKAAVGSLMFLMTCSRPDISFETSKVSQFSENPGPAHWKAVKRIFRYIKGTKELRLVFRSKSEGDKGQEGTKCDSLQLTAFCDSDWPGDIDSRRSTSGYVLILCGGPVSWSTRVQ 354
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 187 bits (474), Expect = 2.070e-49 Identity = 107/308 (34.74%), Postives = 172/308 (55.84%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYG-GQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
+L A ++ L +FD +QAF+++D+DE ++ +P+ + G + +LNK++YGL Q R W+ + +GF Q D CVFR + + V +VV VDDI + + + D+F +L +K++GD R+Y GC R+ A LKI Q Y E + +F V+ G +I G+ LS+ D+ EE+ +P+RE G+LMW TRPDIA+A+RAVAR+C +P H +A + I Y++ D I + G L M+ + D+++ RRS+ G +++ G ISW+SR Q+
Sbjct: 718 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 1017
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.940e-49 Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
++L A K L+++D +QA+ A +DE+ ++++P + + +AIYGL Q+GR W + GFEQ K DPCVFRK+VD+ +++V+ VDDIL + + A+ L +KF K++G+ +++ GC I R+ +A L+I Q Y++SMVE+FDVK S+I AT G K +E EE ++P REA G++MW +RPD++ A+RAVAR P H A+ KI YL +D I Y +G L + Y D+++ D RRS+ G + V+S S+ Q +
Sbjct: 833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1130
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 186 bits (473), Expect = 3.120e-49 Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
++L A K L+++D +QA+ A +DE+ ++++P + + +AIYGL Q+GR W + GFEQ K DPCVFRK+VD+ +++V+ VDDIL + + A+ L +KF K++G+ +++ GC I R+ +A L+I Q Y++SMVE+FDVK S+I AT G K +E EE ++P REA G++MW +RPD++ A+RAVAR P H A+ KI YL +D I Y +G L + Y D+++ D RRS+ G + V+S S+ Q +
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1509
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 186 bits (473), Expect = 3.170e-49 Identity = 111/308 (36.04%), Postives = 173/308 (56.17%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCELCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQEV 308
++L A K L+++D +QA+ A +DE+ ++++P + + +AIYGL Q+GR W + GFEQ K DPCVFRK+VD+ +++V+ VDDIL + + A+ L +KF K++G+ +++ GC I R+ +A L+I Q Y++SMVE+FDVK S+I AT G K +E EE ++P REA G++MW +RPD++ A+RAVAR P H A+ KI YL +D I Y +G L + Y D+++ D RRS+ G + V+S S+ Q +
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSI 1672
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.310e-49 Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
ML A + +L +FD EQAF++++++E Y+ +P+ G + +L K++YGL Q R W+ + A+GFEQ D CVFR + D +++VV VDDI A + + D+F +L + +K++G+ R+Y GC RN++ L I Q + + + ++ V G + +SGV LS D E +FP+RE G+LMW TRPDIA+A+RAVAR+C +P H A M I Y + I++ E ++ Y D++F RRS+ G ++ G +SW+SR Q+
Sbjct: 1383 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 1682
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.320e-49 Identity = 105/308 (34.09%), Postives = 167/308 (54.22%), Query Frame = 0
Query: 1 MLLTTAVAKDGELHYFDAEQAFLKADIDEKSYIEIPKEYQKFPGAVGRLNKAIYGLVQTGRCWNKKFYGDMAAIGFEQAKTDPCVFRKVVDDEAEVVVVVRVDDILAHTKYKATMDRFATELEQKFKLKDMGDARYYMGCHITRNRKARELKIDQHLYVESMVEKFDVKKGSKIAATSGVPTLSKTDESRNPKEKEEMRKFPYREAAGALMWTEAMTRPDIASALRAVARFCQNPGPAHKKAVMKITQYLLHAKDWRIAYGGQGCE-LCMKAYTDSNFGPCLDTRRSILGAVLILVKGVISWYSRMQE 307
ML A + +L +FD EQAF++++++E Y+ +P+ G + +L K++YGL Q R W+ + A+GFEQ D CVFR + D +++VV VDDI A + + D+F +L + +K++G+ R+Y GC RN++ L I Q + + + ++ V G + +SGV LS D E +FP+RE G+LMW TRPDIA+A+RAVAR+C +P H A M I Y + I++ E ++ Y D++F RRS+ G ++ G +SW+SR Q+
Sbjct: 1169 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGE-RERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDAD------EVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQK 1468 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103790.320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig103790.320.1 ID=prot_H-elongata_contig103790.320.1|Name=mRNA_H-elongata_contig103790.320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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