prot_H-elongata_contig10356.296.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10356.296.1
Unique Nameprot_H-elongata_contig10356.296.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length296
Homology
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BLAST of mRNA_H-elongata_contig10356.296.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.700e-60
Identity = 109/133 (81.95%), Postives = 115/133 (86.47%), Query Frame = 0 
Query:  108 YAPNPPGIPAQVGYQYNPSGQAYGSIYYGQQGPIQSNPYQYSYPPHQYPPSASQYQ-GGGGQRFPGMPRGYPTTDYG------MGYGQMDYSGSNQYGLPHNGNTYMSDVGKEQYGDFSQDQFGMPP-MAGQG 232
            YAP PPG+PAQVGYQY PSGQAYGSIYYGQQGP+QSNPYQY YPPHQYPPSASQYQ GGGGQRFP MPRGYP T+YG      MGYGQMDYS S+QYG+P NGN YMSDVGKEQYGDF QDQFGMP  M+GQG
Sbjct:  771 YAPTPPGMPAQVGYQYTPSGQAYGSIYYGQQGPVQSNPYQYGYPPHQYPPSASQYQQGGGGQRFPNMPRGYPATEYGSQGGMGMGYGQMDYSASSQYGVPPNGNGYMSDVGKEQYGDFGQDQFGMPQQMSGQG 903
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10356.296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT6_ECTSI1.700e-6081.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10356contigH-elongata_contig10356:4300..8132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10356.296.1mRNA_H-elongata_contig10356.296.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10356 4300..8132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10356.296.1 ID=prot_H-elongata_contig10356.296.1|Name=mRNA_H-elongata_contig10356.296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp
NFYGSSVSTLSSAAKPAPGGVYSAATSSSAHGGGGTTGSGVGVGGHGSSS
HGSPSTTASKPLYGAQPSGVPSGTAVSGTGGPGAMSGMQPGGQPQQAPPQ
QHQQQQGYAPNPPGIPAQVGYQYNPSGQAYGSIYYGQQGPIQSNPYQYSY
PPHQYPPSASQYQGGGGQRFPGMPRGYPTTDYGMGYGQMDYSGSNQYGLP
HNGNTYMSDVGKEQYGDFSQDQFGMPPMAGQGAGASGAGTSGAGVSGGGV
GVGVGGSTSSSSAGGGSGIGGAGGGVDKASGGPLSATAGGGGAGGA
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