prot_H-elongata_contig10343.285.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10343.285.1
Unique Nameprot_H-elongata_contig10343.285.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length884
Homology
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: D8LQJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ1_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.370e-19
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  607 EAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPE 697
            EAVV+ + S TGLLEC  +LR++G   G+L+STG V V  TG I G L+ +KFLLV+GQV G+V C+ V++ + GKVFG+I+S  +T+GP+
Sbjct:  117 EAVVALTMSLTGLLECGRSLRMEGTFQGDLISTGRVVVAPTGKIKGHLKGLKFLLVEGQVDGDVVCEEVMVVNEGKVFGDISSARVTVGPQ 207          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: A0A6H5KXR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.090e-13
Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 0
Query:  605 ELEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPEAMMRGKLDVVENISE 712
            E EAVV+ + S  G+LEC  +LR++G   G+L+STG V V  TG                    +V CD V++ + GKVFG+I+S  +T+GP++ +RG+L VVE++ E
Sbjct:  703 EPEAVVARTMSLKGMLECGRSLRMEGTFQGDLISTGRVVVAPTGXXXXXXXXXXXXXXXXXXXXDVVCDEVMVVNEGKVFGDISSARVTVGPQSTIRGRLTVVEDMDE 810          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: D7G0L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L1_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 5.300e-11
Identity = 38/99 (38.38%), Postives = 64/99 (64.65%), Query Frame = 0
Query:  604 QELEAVVSESCSFTGLLECACTLRVDGKLAGELVST-GSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPEAMMR 701
            Q+ E++V+E+    G LE    LRVDG+  GEL++  GS+ VG  G ++GDL++++ + V+G V GNV+ + V I +AG + G++    +T+ P A +R
Sbjct:   89 QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNAGMLLGDVQCMCLTLDPTASIR 187          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: UPI001409D6AF (polymer-forming cytoskeletal protein n=1 Tax=Sphingobacterium chungjuense TaxID=2675553 RepID=UPI001409D6AF)

HSP 1 Score: 63.5 bits (153), Expect = 2.820e-8
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  605 ELEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPEAMMRGKLDVVE 708
            ++  V++E  S  G L  A +LRVDGK+ G +     V +G +  + GD+ S + L+V G +TG+V C T+ +  AGK++GN++    ++     + G + V +
Sbjct:   19 QISTVIAEGISIEGDLIGAESLRVDGKIKGNIRIGKGVIIGESAYVDGDI-SCETLIVYGHITGDVQCKTLTLKSAGKLYGNVSMTQFSVDMGGQLIGAVTVAD 121          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: A0A7V6Q1G7_9FIRM (Polymer-forming cytoskeletal protein n=1 Tax=Thermoanaerobacterales bacterium TaxID=2304039 RepID=A0A7V6Q1G7_9FIRM)

HSP 1 Score: 63.2 bits (152), Expect = 4.130e-8
Identity = 31/102 (30.39%), Postives = 57/102 (55.88%), Query Frame = 0
Query:  606 LEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCD-TVVIGDAGKVFGNITSESITIGPEAMMRGKLDV 706
            ++ ++     F G ++ A  LR++GK+ GE+ STG V +   G +  D+++ +  ++ G  +GNVW +  + I   GKV G+I   SI I    ++ GK ++
Sbjct:   16 VDTILGSGTEFNGKIKAAGILRIEGKVEGEIESTGDVIITENGVVNADIKA-RHAVIAGTYSGNVWLEGKIEIRSTGKVIGDIKVASIVIEDGGLLEGKCEM 116          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: A0A3D5KJ92_CLOSP (Cell shape determination protein CcmA n=2 Tax=Clostridia TaxID=186801 RepID=A0A3D5KJ92_CLOSP)

HSP 1 Score: 62.8 bits (151), Expect = 4.300e-8
Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  606 LEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCD-TVVIGDAGKVFGNITSESITIGPEAMMRGKLDVVE 708
            +E+++ E C+  G L     LR+DG + G +     V +G   +I GDL + K  +V G++ GNV CD ++ +  +GK+ G+IT E +++    ++ GK  VV+
Sbjct:   13 IESLIGEQCNIAGDLNGGGLLRIDGSIEGNVNWQDDVILGVFSTINGDL-TCKNAVVAGKINGNVVCDGSLSVESSGKILGDITIEKLSVKEGGIINGKCSVVK 115          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: UPI001C476A22 (polymer-forming cytoskeletal protein n=1 Tax=Chryseobacterium sp. F4 TaxID=2852098 RepID=UPI001C476A22)

HSP 1 Score: 62.4 bits (150), Expect = 6.470e-8
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0
Query:  606 LEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPEAMMRGKL 704
            +  V+     FTG ++ + T+++DGK+ G +     V +G    I GDL+S K ++V G + GN++C+ ++I   G V G+I +++I I       GKL
Sbjct:   20 ISTVLGSEIMFTGDIQGSQTIKIDGKVKGNVQVENGVILGEKAHIEGDLKS-KNIIVFGNILGNIYCNELIIKKCGTVNGDIQTKTIEIEMGGKYNGKL 117          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: A0A1F7RQC2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Schekmanbacteria bacterium RBG_13_48_7 TaxID=1817878 RepID=A0A1F7RQC2_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 9.040e-8
Identity = 31/103 (30.10%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  605 ELEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVV-IGDAGKVFGNITSESITIGPEAMMRGKLDV 706
            E++A V E  +F G+L    T+R+DG++ GE+++ G++ VG+T  +  +++  K + + G+V G++    VV I  +GKV+G+I + ++ I    + +G  ++
Sbjct:   11 EIKAFVGEGTTFKGVLMYEGTIRIDGRVEGEIITDGNLVVGKTAVVEAEIKVGK-ISISGKVVGSITAKEVVEIHPSGKVYGDIRTPALIIEEGVIFQGNCEM 112          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: UPI000BB7BAF1 (polymer-forming cytoskeletal protein n=1 Tax=Bacillus sp. FJAT-44876 TaxID=2011013 RepID=UPI000BB7BAF1)

HSP 1 Score: 61.2 bits (147), Expect = 2.230e-7
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  605 ELEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWCDTVV-IGDAGKVFGNITSESITIGPEAMMRGK 703
            E+  VV E  +FTG LE   ++R+DGK+ GE+   G VT+G+ G +  DL++ + L + G++ GNV  +  + I D+G++ G     +I I       G+
Sbjct:   13 EISTVVGEETTFTGTLEVNSSIRIDGKVFGEVKCYGDVTLGKEGYVENDLKA-RNLFLAGKIQGNVKVEGKIHIYDSGRLDGKAEMSTIIIDENGYFNGE 111          
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Match: A0A661XFJ0_9BACT (Cell shape determination protein CcmA n=1 Tax=Caldiserica bacterium TaxID=2052147 RepID=A0A661XFJ0_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 2.910e-7
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 0
Query:  607 EAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSIIGDLRSIKFLLVDGQVTGNVWC-DTVVIGDAGKVFGNITSESITIGPEAMMRGK 703
            ++V +E  S  G + C  +LRV+GK+ G +   G +T+  +     D+ + K +++ GQV GN+   +TV I  +GKV+G++T++ I+I   A+  GK
Sbjct:   20 QSVFAEDLSVKGDIVCPGSLRVEGKIEGSIKGKGIITIAESAVAKADIDAAKVVVL-GQVEGNIIATETVEIVASGKVYGDVTTDKISIEEGAVFTGK 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10343.285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQJ1_ECTSI1.370e-1952.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXR1_9PHAE3.090e-1339.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0L1_ECTSI5.300e-1138.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001409D6AF2.820e-831.73polymer-forming cytoskeletal protein n=1 Tax=Sphin... [more]
A0A7V6Q1G7_9FIRM4.130e-830.39Polymer-forming cytoskeletal protein n=1 Tax=Therm... [more]
A0A3D5KJ92_CLOSP4.300e-832.69Cell shape determination protein CcmA n=2 Tax=Clos... [more]
UPI001C476A226.470e-832.32polymer-forming cytoskeletal protein n=1 Tax=Chrys... [more]
A0A1F7RQC2_9BACT9.040e-830.10Uncharacterized protein n=1 Tax=Candidatus Schekma... [more]
UPI000BB7BAF12.230e-734.00polymer-forming cytoskeletal protein n=1 Tax=Bacil... [more]
A0A661XFJ0_9BACT2.910e-733.67Cell shape determination protein CcmA n=1 Tax=Cald... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 587..607
NoneNo IPR availablePANTHERPTHR35024:SF4coord: 597..717
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 609..704
e-value: 9.8E-17
score: 61.1
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 597..717

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10343contigH-elongata_contig10343:1630..6645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10343.285.1mRNA_H-elongata_contig10343.285.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10343 1260..8639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10343.285.1 ID=prot_H-elongata_contig10343.285.1|Name=mRNA_H-elongata_contig10343.285.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=884bp
MPDTNIADSAQAKSQVEPSSSLETVSKLDLELERHGDTLGTINSAASSDF
FKGKNSPSGLEGTATTLSLSDDQDGTLAPNDSKGFQGLDTLGDKKESVLT
AVEEQPPGTLLQVQHNSWNLRQQPSKVPPPSLWPHQVSTREKVSQHASPN
GSQDYSRETAAAGATRETNNVWESSTVDGVACPASRFNPHPQQVDATGRQ
VQPLQYTDACEASTAHLRSGPQDVDVVDATGRGRKDWQASLPQRSSFHAV
GYPAAEIAYPSRKAGLPPRPGSWEAGISSESRLARIGKQGQHSPPLNFMA
SSSKVATTRESRNLSARAAAAAAAAAAVLGHDFRAKSESNVEAPFHSSLA
PSTQRGQVAAVAPMATVSGFDPGSRATPGRAPGRRRAFFGSKEGLAQRKG
HKIMNYLKGSLTTAGDERANVSCVTIATSNDITQQRMPAPDAAHRVRTPA
STPGTRRKGSTHFSTPGAWRSRSASTRRSDSAILPNNLEADEKHERIAAA
PSGVLGTAVVAGTETPTDGDAGHTLALADKGVVDYKNDDNDMLEVDKNID
GHNAARSDSPAGAVCGEEERTPAMEEKDGGGTIAVAPEDLEEEIDEKEEE
QKEQELEAVVSESCSFTGLLECACTLRVDGKLAGELVSTGSVTVGRTGSI
IGDLRSIKFLLVDGQVTGNVWCDTVVIGDAGKVFGNITSESITIGPEAMM
RGKLDVVENISEARAHAFAQDEIRPLMKEEEEEVESVESKTPQDSLKAKP
GVKCVATDVEARAGDSHNEAELDAAKGVSVTGAEGKGCNSQEREMQDCVS
PAFAEEGEAKNDVIDTVDAAGNARSAKADAGIAMVDSRAAEVDLSDSRLM
MGQAVAGASEGSVVGASSTEPRHSDQQEKREDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B