prot_H-elongata_contig10276.239.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10276.239.1
Unique Nameprot_H-elongata_contig10276.239.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1080
Homology
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE)

HSP 1 Score: 539 bits (1388), Expect = 2.570e-170
Identity = 500/1163 (42.99%), Postives = 614/1163 (52.79%), Query Frame = 0
Query:    1 MMVGAKDNLPAGSRSGVVAPVPINTPSLRQEIHGTKDDNAAMGSINRSNAGTGWGSAAANTSTATGNATDYVSMRSRGTGANTG-----GDDAFTRHFPDLRTGLEQAERLDAATKASTKVAPLRKQKPESTIDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIAEAVHNRAASTPKTEEFRRKSPSFAEEISGSRSRWTERTPLKEGGVKGRVGGGRGAAGDXXXXXXXXXXXXXRERG-----GGRSANAVHDRDRKVPRDSYQDKDFGKNFRQAPERIAGGNTRTRESSFGSRAH-GTANSDQDGQSANVKPL-TTTYVRQHGPPPRRAAQAGVGASQSPTRQEHQPPPTKQPTRSSAYSAS--TRPELPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAIECSLSQSTLLVHGAGSKGRIGEQDE-LETRAQL----HDAREEDTCRFECSWGGSEQGRAAVDGDYSGSGDVERTLNERWKEYTPGSLSPRSAPTSTRWKETNDELRA-SRRWNCKEESHVDGGKRDKST-EDDDVGSSCVVTPAMASSTQSQSSSWRGTADDGWGADAVEQD-GDAGM-LTVSTTEGVEQQD-----------VVSETTVSAETIMPLHKVETIAGPATLAKADDSNEDHASVQGPLVAQQQVQQVAEATQPAVRTTSWEPQL--SVGTELWEPASHGSDSLPSSSQGPGQMGSSGSGSASQPWRDPWGTSGFGLPSGGD--------FLGNGPSETQKGRYLPPALRNRTPGERNHVEHDTETISPAMPQDVSTAQ----DGSTADVSTQDLVVIQG-----IPSSGTAVGSTHMFEQHQQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWQH----ATSHRVEERTESPGDRALHRSQAMQQSQQVQRAQPLHLGDQPHIDRNYRPSPSTAFS-FQNPDRHQHPIQESPLHHQFQAEHYHAQSYHSQQDQTGRASVSEHLNRSHFQPDHV----HQFNQLQIQQPVHVSQHRAPHSLHXXXXXXXXXXXXXXXXXXPGPLGGQVAHPRQQPQHHQ---DMGR-SSQAQHLHMQRQQRHISRQSP--AFMMSSQGMSYSDPRTPRGDGGLGGLPVQMTGAYRDGPQ----------------PGSYGFTPPDQHRKR 1079
            MMVG KD LPAG+++GVVAPVPINTPSLRQEI G   +NA   +INRS +G GWGSA  ++++A   A   V+    G G   G     GDD FTRHFPDLR GLEQAE+LDA TKAS+KVAPLRK K E   DQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIA+AVHNR A+ PK EE RR   SFA+EIS ++SRW ER P +EGG + R G GRG  G              +ERG     GGR      +R  +  RD++ +K+  ++FRQ   R A  +TR RES FGS AH G A+S QD  S       +TTYVRQHGPPPR+AA      + +P  Q+ QP  ++QPTRSSAYSAS  +  +                                      +   SQS   V G G  GR G+ DE +ET        HDA  E T RF  SWG  EQG+ A+D D S    +ERT + RWKE   GSL+P   PT+TRWKE  +E RA +RRW  +E+  + GG+  +S  ED D+  S    P MAS T SQ+SSW+ +ADDGWG    + D GD+ M  T ST+E +EQQ+           V +   VS+E   P   ++             S ED  S  G    QQQ         P +  +SWEPQL    G +LWE  ++G D   +  QGPGQ G+S SG +SQPW DPWGTSGFGL + GD        FL N P E +K RYLPPALRNR P   N  E +   I P   Q++ T +    D ++ADVS QDLV+  G         G+      ++EQ     XXXXXXX                      EEWQ     A+      +T    +  L + Q + QS Q   +QPLHL +  +++R Y+ +PS  FS FQ       P  + P  HQFQAEH                   +HL R  +Q DH+      FNQ+QI Q +H  QH A     XXXXXXXXXXX                HP+QQ  H     DM R +SQAQ +HM   Q H+  Q P  AFMM SQGM  +DPR  RG G LGGLPVQM   YRD                   PG+YG   P+ H KR
Sbjct:   19 MMVGTKDALPAGAKTGVVAPVPINTPSLRQEIQG---ENAGTAAINRSGSGGGWGSAVVSSASANSAAGQSVAS-GNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEIS-TKSRWAER-PFQEGGSRVR-GAGRGTGGTWEMN---------KERGRDSGQGGRG----FERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSATPSTTYVRQHGPPPRKAATPAT--TPAPAVQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSAETLSKWRSASPSNPQPAMDAPPEAPPMPDSPSSQSGSYVRGDGP-GREGQADERVETSVSSSRSDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAG--IERTQSGRWKEPA-GSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAGEDADIDDSSAAPPTMASPT-SQNSSWKESADDGWGVKVPKHDRGDSDMSATASTSEKLEQQEQPLEGGGGSVEVGAGADVSSE--KPAEGLDAXXXXXXXXXXIPS-EDTTSFGGSFAQQQQAH-------PVISKSSWEPQLPRGAGGDLWETPANGRDHH-TQQQGPGQAGASTSGGSSQPWSDPWGTSGFGLSASGDQRPGSIASFLDNAPEEPRKDRYLPPALRNRNPSHEN--EEEAANI-PLADQEIDTNRSSLSDVASADVSAQDLVLSGGGSMRTDSPDGSCAMKAPLYEQXXXXXXXXXXXXVPL-------------------EEWQQEGAQASRRSQHNQTAHAVEPQLQQQQPVHQSHQPA-SQPLHLHEHANLNRGYQRNPSEGFSSFQ-------PQMQDPGLHQFQAEHXXXXXXXXXXXXXXXXXPEQHLPRHQYQSDHLPVQRQHFNQVQIPQHMHPPQHSAXXXXXXXXXXXXXXXXHQ-------------GHPQQQVYHQGQQLDMSRQTSQAQQMHM--HQHHLQMQHPSSAFMMPSQGMG-TDPRGARGVG-LGGLPVQMAAPYRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 1096          
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Match: D8LK50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK50_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.460e-103
Identity = 262/546 (47.99%), Postives = 322/546 (58.97%), Query Frame = 0
Query:    1 MMVGAKDNLPAGSRSGVVAPVPINTPSLRQEIHGTKDDNAAMGSINRSNAGTGWGSAAANTSTATGNATDYVSM-----RSRGTGANTGGDDAFTRHFPDLRTGLEQAERLDAATKASTKVAPLRKQKPESTIDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIAEAVHNRAASTPKTEEFRRKSPSFAEEISGSRSRWTERTPLKEGGVKGRVGGGRGAAGDXXXXXXXXXXXXXRERG-----GGRSANAVHDRDRKVPRDSYQDKDFGKNFRQAPERIAGGNTRTRESSFGSRAH-GTANSDQDGQS-ANVKPLTTTYVRQHGPPPRRAAQAGVGASQSPTRQEHQPPPTKQPTRSSAYSAS--TRPELPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAIECSLSQSTLLVHGAGSKGRIGEQDELETRAQL--------HDAREEDTCRFECSWGGSEQGRAAVDGDYSGSGDVERTLNERWKEYTPGSLSPRSAPTSTRWKETNDELRA-SRRWNCKEESHVDGGKRDKSTEDD 523
            MMVG KD +PAG+++GVVAPVPINTPSLRQEI G   DNA   +INRS +G GWGSA A++++A   A           R  G+G   G DD FTRHFPDLR GLEQAE+LDA TKAS+KVAPLRK K E   DQGPSLRPRAMLKPTGSAGGGS ATAAAQAAIA+AVHNR A+ PK EE RR   SFA+EIS ++SRW ER PL+EGG +GR G GRG  G              +ERG     GGR      +R  +  RD++ +K+  ++FRQ   R A  +TR RES FGS AH G A+S QD  S  + K  +TTYVRQHGPPPR+ A      + +P  Q+ QP  ++QPTRSSAYSAS  +  +                                      +   SQS   V   G   R G + + + R +         HDA  E T RF  SWG  EQG+ A+D D S    +ERT + RWKE   GSL+P   PT+TRWKE  +E RA +RRW  +E+  + GG+  +S E+D
Sbjct:   19 MMVGTKDAVPAGAKTGVVAPVPINTPSLRQEIQG---DNAGTAAINRSGSGGGWGSAVASSASANSAAGQXXXXXXXXXRRDGSGRQRG-DDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEIS-TKSRWAER-PLQEGGSRGR-GAGRGTGGTWEMN---------KERGRDSGQGGRG----FERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSKTPSTTYVRQHGPPPRKVATPAT--TPAPAAQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSVETPSKWRSASPSNPQPAMDAPPEAPQMPDSPSSQSGSYVRAHGPPRRSGREGQADERGETSISSSRPDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAG--IERTQSGRWKEPA-GSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAEED 539          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJY1_9PHAE2.570e-17042.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK50_ECTSI1.460e-10347.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10276contigH-elongata_contig10276:2637..7785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10276.239.1mRNA_H-elongata_contig10276.239.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10276 1217..7807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10276.239.1 ID=prot_H-elongata_contig10276.239.1|Name=mRNA_H-elongata_contig10276.239.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1080bp
MMVGAKDNLPAGSRSGVVAPVPINTPSLRQEIHGTKDDNAAMGSINRSNA
GTGWGSAAANTSTATGNATDYVSMRSRGTGANTGGDDAFTRHFPDLRTGL
EQAERLDAATKASTKVAPLRKQKPESTIDQGPSLRPRAMLKPTGSAGGGS
VATAAAQAAIAEAVHNRAASTPKTEEFRRKSPSFAEEISGSRSRWTERTP
LKEGGVKGRVGGGRGAAGDRGSGGSWESSGTYRERGGGRSANAVHDRDRK
VPRDSYQDKDFGKNFRQAPERIAGGNTRTRESSFGSRAHGTANSDQDGQS
ANVKPLTTTYVRQHGPPPRRAAQAGVGASQSPTRQEHQPPPTKQPTRSSA
YSASTRPELPSETFEPLRAPSETSSKWRSFSSPSAQPIESPESTAIECSL
SQSTLLVHGAGSKGRIGEQDELETRAQLHDAREEDTCRFECSWGGSEQGR
AAVDGDYSGSGDVERTLNERWKEYTPGSLSPRSAPTSTRWKETNDELRAS
RRWNCKEESHVDGGKRDKSTEDDDVGSSCVVTPAMASSTQSQSSSWRGTA
DDGWGADAVEQDGDAGMLTVSTTEGVEQQDVVSETTVSAETIMPLHKVET
IAGPATLAKADDSNEDHASVQGPLVAQQQVQQVAEATQPAVRTTSWEPQL
SVGTELWEPASHGSDSLPSSSQGPGQMGSSGSGSASQPWRDPWGTSGFGL
PSGGDFLGNGPSETQKGRYLPPALRNRTPGERNHVEHDTETISPAMPQDV
STAQDGSTADVSTQDLVVIQGIPSSGTAVGSTHMFEQHQQTQQQPQQQAQ
QQQSQQHHQPQQQVQQQHQSLEEWQHATSHRVEERTESPGDRALHRSQAM
QQSQQVQRAQPLHLGDQPHIDRNYRPSPSTAFSFQNPDRHQHPIQESPLH
HQFQAEHYHAQSYHSQQDQTGRASVSEHLNRSHFQPDHVHQFNQLQIQQP
VHVSQHRAPHSLHQTHQQQQGYQQGQQPQLPPGPLGGQVAHPRQQPQHHQ
DMGRSSQAQHLHMQRQQRHISRQSPAFMMSSQGMSYSDPRTPRGDGGLGG
LPVQMTGAYRDGPQPGSYGFTPPDQHRKR*
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