prot_H-elongata_contig10276.239.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 2.570e-170 Identity = 500/1163 (42.99%), Postives = 614/1163 (52.79%), Query Frame = 0
Query: 1 MMVGAKDNLPAGSRSGVVAPVPINTPSLRQEIHGTKDDNAAMGSINRSNAGTGWGSAAANTSTATGNATDYVSMRSRGTGANTG-----GDDAFTRHFPDLRTGLEQAERLDAATKASTKVAPLRKQKPESTIDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIAEAVHNRAASTPKTEEFRRKSPSFAEEISGSRSRWTERTPLKEGGVKGRVGGGRGAAGDXXXXXXXXXXXXXRERG-----GGRSANAVHDRDRKVPRDSYQDKDFGKNFRQAPERIAGGNTRTRESSFGSRAH-GTANSDQDGQSANVKPL-TTTYVRQHGPPPRRAAQAGVGASQSPTRQEHQPPPTKQPTRSSAYSAS--TRPELPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAIECSLSQSTLLVHGAGSKGRIGEQDE-LETRAQL----HDAREEDTCRFECSWGGSEQGRAAVDGDYSGSGDVERTLNERWKEYTPGSLSPRSAPTSTRWKETNDELRA-SRRWNCKEESHVDGGKRDKST-EDDDVGSSCVVTPAMASSTQSQSSSWRGTADDGWGADAVEQD-GDAGM-LTVSTTEGVEQQD-----------VVSETTVSAETIMPLHKVETIAGPATLAKADDSNEDHASVQGPLVAQQQVQQVAEATQPAVRTTSWEPQL--SVGTELWEPASHGSDSLPSSSQGPGQMGSSGSGSASQPWRDPWGTSGFGLPSGGD--------FLGNGPSETQKGRYLPPALRNRTPGERNHVEHDTETISPAMPQDVSTAQ----DGSTADVSTQDLVVIQG-----IPSSGTAVGSTHMFEQHQQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWQH----ATSHRVEERTESPGDRALHRSQAMQQSQQVQRAQPLHLGDQPHIDRNYRPSPSTAFS-FQNPDRHQHPIQESPLHHQFQAEHYHAQSYHSQQDQTGRASVSEHLNRSHFQPDHV----HQFNQLQIQQPVHVSQHRAPHSLHXXXXXXXXXXXXXXXXXXPGPLGGQVAHPRQQPQHHQ---DMGR-SSQAQHLHMQRQQRHISRQSP--AFMMSSQGMSYSDPRTPRGDGGLGGLPVQMTGAYRDGPQ----------------PGSYGFTPPDQHRKR 1079
MMVG KD LPAG+++GVVAPVPINTPSLRQEI G +NA +INRS +G GWGSA ++++A A V+ G G G GDD FTRHFPDLR GLEQAE+LDA TKAS+KVAPLRK K E DQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIA+AVHNR A+ PK EE RR SFA+EIS ++SRW ER P +EGG + R G GRG G +ERG GGR +R + RD++ +K+ ++FRQ R A +TR RES FGS AH G A+S QD S +TTYVRQHGPPPR+AA + +P Q+ QP ++QPTRSSAYSAS + + + SQS V G G GR G+ DE +ET HDA E T RF SWG EQG+ A+D D S +ERT + RWKE GSL+P PT+TRWKE +E RA +RRW +E+ + GG+ +S ED D+ S P MAS T SQ+SSW+ +ADDGWG + D GD+ M T ST+E +EQQ+ V + VS+E P ++ S ED S G QQQ P + +SWEPQL G +LWE ++G D + QGPGQ G+S SG +SQPW DPWGTSGFGL + GD FL N P E +K RYLPPALRNR P N E + I P Q++ T + D ++ADVS QDLV+ G G+ ++EQ XXXXXXX EEWQ A+ +T + L + Q + QS Q +QPLHL + +++R Y+ +PS FS FQ P + P HQFQAEH +HL R +Q DH+ FNQ+QI Q +H QH A XXXXXXXXXXX HP+QQ H DM R +SQAQ +HM Q H+ Q P AFMM SQGM +DPR RG G LGGLPVQM YRD PG+YG P+ H KR
Sbjct: 19 MMVGTKDALPAGAKTGVVAPVPINTPSLRQEIQG---ENAGTAAINRSGSGGGWGSAVVSSASANSAAGQSVAS-GNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEIS-TKSRWAER-PFQEGGSRVR-GAGRGTGGTWEMN---------KERGRDSGQGGRG----FERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSATPSTTYVRQHGPPPRKAATPAT--TPAPAVQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSAETLSKWRSASPSNPQPAMDAPPEAPPMPDSPSSQSGSYVRGDGP-GREGQADERVETSVSSSRSDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAG--IERTQSGRWKEPA-GSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAGEDADIDDSSAAPPTMASPT-SQNSSWKESADDGWGVKVPKHDRGDSDMSATASTSEKLEQQEQPLEGGGGSVEVGAGADVSSE--KPAEGLDAXXXXXXXXXXIPS-EDTTSFGGSFAQQQQAH-------PVISKSSWEPQLPRGAGGDLWETPANGRDHH-TQQQGPGQAGASTSGGSSQPWSDPWGTSGFGLSASGDQRPGSIASFLDNAPEEPRKDRYLPPALRNRNPSHEN--EEEAANI-PLADQEIDTNRSSLSDVASADVSAQDLVLSGGGSMRTDSPDGSCAMKAPLYEQXXXXXXXXXXXXVPL-------------------EEWQQEGAQASRRSQHNQTAHAVEPQLQQQQPVHQSHQPA-SQPLHLHEHANLNRGYQRNPSEGFSSFQ-------PQMQDPGLHQFQAEHXXXXXXXXXXXXXXXXXPEQHLPRHQYQSDHLPVQRQHFNQVQIPQHMHPPQHSAXXXXXXXXXXXXXXXXHQ-------------GHPQQQVYHQGQQLDMSRQTSQAQQMHM--HQHHLQMQHPSSAFMMPSQGMG-TDPRGARGVG-LGGLPVQMAAPYRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 1096
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Match: D8LK50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK50_ECTSI) HSP 1 Score: 354 bits (908), Expect = 1.460e-103 Identity = 262/546 (47.99%), Postives = 322/546 (58.97%), Query Frame = 0
Query: 1 MMVGAKDNLPAGSRSGVVAPVPINTPSLRQEIHGTKDDNAAMGSINRSNAGTGWGSAAANTSTATGNATDYVSM-----RSRGTGANTGGDDAFTRHFPDLRTGLEQAERLDAATKASTKVAPLRKQKPESTIDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIAEAVHNRAASTPKTEEFRRKSPSFAEEISGSRSRWTERTPLKEGGVKGRVGGGRGAAGDXXXXXXXXXXXXXRERG-----GGRSANAVHDRDRKVPRDSYQDKDFGKNFRQAPERIAGGNTRTRESSFGSRAH-GTANSDQDGQS-ANVKPLTTTYVRQHGPPPRRAAQAGVGASQSPTRQEHQPPPTKQPTRSSAYSAS--TRPELPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAIECSLSQSTLLVHGAGSKGRIGEQDELETRAQL--------HDAREEDTCRFECSWGGSEQGRAAVDGDYSGSGDVERTLNERWKEYTPGSLSPRSAPTSTRWKETNDELRA-SRRWNCKEESHVDGGKRDKSTEDD 523
MMVG KD +PAG+++GVVAPVPINTPSLRQEI G DNA +INRS +G GWGSA A++++A A R G+G G DD FTRHFPDLR GLEQAE+LDA TKAS+KVAPLRK K E DQGPSLRPRAMLKPTGSAGGGS ATAAAQAAIA+AVHNR A+ PK EE RR SFA+EIS ++SRW ER PL+EGG +GR G GRG G +ERG GGR +R + RD++ +K+ ++FRQ R A +TR RES FGS AH G A+S QD S + K +TTYVRQHGPPPR+ A + +P Q+ QP ++QPTRSSAYSAS + + + SQS V G R G + + + R + HDA E T RF SWG EQG+ A+D D S +ERT + RWKE GSL+P PT+TRWKE +E RA +RRW +E+ + GG+ +S E+D
Sbjct: 19 MMVGTKDAVPAGAKTGVVAPVPINTPSLRQEIQG---DNAGTAAINRSGSGGGWGSAVASSASANSAAGQXXXXXXXXXRRDGSGRQRG-DDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEIS-TKSRWAER-PLQEGGSRGR-GAGRGTGGTWEMN---------KERGRDSGQGGRG----FERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSKTPSTTYVRQHGPPPRKVATPAT--TPAPAAQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSVETPSKWRSASPSNPQPAMDAPPEAPQMPDSPSSQSGSYVRAHGPPRRSGREGQADERGETSISSSRPDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAG--IERTQSGRWKEPA-GSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAEED 539 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10276.239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig10276.239.1 ID=prot_H-elongata_contig10276.239.1|Name=mRNA_H-elongata_contig10276.239.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1080bpback to top |