prot_H-elongata_contig102251.199.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102251.199.1
Unique Nameprot_H-elongata_contig102251.199.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A6H5JB99_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB99_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.140e-43
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 0
Query:    4 ALGLKEFMHRKRMLDLYRGILKRARELEDKDVAAQARRQFKLSQEETDPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            ALGLKEFMHR R+L+LYRGILKRAR LEDKDVA +ARRQFK    ETDPLK++M +ADAT HLEA+QG+ R GA   G GGG+SWLDI DP+DKRGRVG GFPW+R
Sbjct:  110 ALGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFKSCLGETDPLKVQMMVADATNHLEAMQGSTR-GAGSGGRGGGDSWLDIHDPEDKRGRVGEGFPWQR 214          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: D8LRC8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC8_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.870e-37
Identity = 68/99 (68.69%), Postives = 80/99 (80.81%), Query Frame = 0
Query:   11 MHRKRMLDLYRGILKRARELEDKDVAAQARRQFKLSQEETDPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            MHR R+L+LYRGILKRAR LEDKDVA +AR+QFK    ETDPLK++M +ADAT HLEA+QG+ R GA   G GG  SWLDI DP+DKRGRVG GFPW++
Sbjct:    1 MHRARVLELYRGILKRARALEDKDVADEARKQFKSCLGETDPLKVQMMVADATNHLEAMQGSTR-GAGSGGGGGDHSWLDIHDPEDKRGRVGKGFPWQQ 98          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A835YQF9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.230e-21
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    7 LKEFMHRKRMLDLYRGILKRARELEDK----DVAAQARRQFKLSQEETDPLKIKMAIADATMHLEALQGAV-RSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            LK+F+ ++++L  YR +LK AR +ED+    +VAAQ R +++    ETD LK++M +A+A  H++ LQG V R+   +    G  SWLD+DDP+D+RGRVG GFPW+R
Sbjct:   31 LKDFVRKRQVLHSYRQLLKCARAMEDRPSGQEVAAQVRERYRAYAHETDSLKLRMLLAEAAQHIDTLQGTVARTSPDMPPPPG--SWLDVDDPEDRRGRVGVGFPWQR 136          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A7S2K2A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2A3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.290e-12
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    7 LKEFMHRKRMLDLYRGILKRARELEDKD-----VAAQARRQFKLSQEETDPLKIKMAIADATMHLEALQGAV--RSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWE 108
            LKEFMHR R++  YR  L+  R + + D     VA + R  F+L   ETD L + MA+ D    L  LQ  V  +    V  +G  +SWL+I D  D+RGRVG  +PWE
Sbjct:   35 LKEFMHRSRVIKQYRSYLRAIRCIPEDDAWREQVAREIRDSFRLKATETDKLSVTMAVTDGDRKLVQLQSMVGYQQKNDVNDSGDNDSWLNIVDEGDQRGRVGMQWPWE 143          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A482SDI4_9ARCH (LYR motif-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDI4_9ARCH)

HSP 1 Score: 65.9 bits (159), Expect = 1.320e-11
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    1 MGGALGLKEFMHRKRMLDLYRGILKRARELED----KDVAAQARRQFKLSQEETDPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPW 107
            +G  L L+ F+ RK++L LYR +++ A  + D    +D+ +Q R  F+ +    D L IK  I +   +L+ LQG     +         SW++ +DP DKRGRVG G+PW
Sbjct:    6 LGETLPLRFFIRRKQVLSLYRNLIRNATRVHDESVQRDIISQIRTDFRRNAHVQDSLVIKSLIQEGNSNLKILQGMAYKDSKAHSIRAQGSWIEQEDPVDKRGRVGEGWPW 116          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A7S1Z286_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z286_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.620e-7
Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 0
Query:    7 LKEFMHRKRMLDLYRGILKRARELEDKDVAAQARRQ----FKLSQEETDPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            +KEF+HR+ +   YR  LK  +        A+A R+    F++   ET+P+ I+MA+ D    L  +Q  V            +SWL+I D  D+RGRVG  +PWER
Sbjct:   72 MKEFLHRQTVTHQYRSFLKAVKLFPKGTEQAEAFREVKSAFRVCSRETNPISIRMAVTDGQRKLAQVQSLVGY---QPSNNDEDSWLNIKDDLDQRGRVGVQWPWER 175          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A7S2XK87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XK87_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.630e-6
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0
Query:    7 LKEFMHRKRMLDLYRGILKRARELEDKDVAAQA----RRQFKLSQEETDPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            LKEF+HR  ++  YR  L+    + D     QA    R  F+ +  ETD + +KM +AD    L+ ++  V        +   +SWL+I D +D RGRVG  +PW R
Sbjct:   49 LKEFLHRTTVVRQYRAFLRAVAVIPDTPWRIQAQTEVRTTFRRNATETDRMALKMTVADGARRLQQVRSMVGYKNPQTESDE-DSWLNIKDEEDPRGRVGVQWPWSR 154          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A7S4JFV4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFV4_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 4.040e-6
Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = 0
Query:    1 MGGALGLKEFMHRKRMLDLYRGILKRARELEDKDVAAQA----RRQFKLSQEETDPLKIKMAIADATMHLEALQGAV-----RSGAAVAGAGGGESWLDIDDPDDKRGRVGTGFPWER 109
            +G    LKEF+H+  ++  YR  L+    + D+     A    RR F+     TD + I M +AD    L  ++  V     RS          +SWL+IDD +DKRGRVG  +PW++
Sbjct:   55 LGNLPSLKEFVHKTAVVRQYRDFLRAVVMIPDETFRQSALDEVRRTFRQHSFMTDKIAIDMEVADGGRRLNQVRSMVGYVDPRSN------DDSDSWLNIDDKEDKRGRVGVEWPWDQ 166          
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Match: A0A7S3V411_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V411_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.590e-5
Identity = 34/114 (29.82%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    7 LKEFMHRKRMLDLYRGILKRARELEDKDVAAQARRQFKLSQE---------ETDPLKIKMAIADATMHLEALQGAVRSGAAVAGA--GGGESWLDIDDPDDKRGRVGTGFPWER 109
            LKEF+HR++++  YRG  +  + ++D+    Q + + K S           E + L I M++ +    L+ L+  V     V G      +SWL+I D +D RGR+G+ +PW++
Sbjct:   89 LKEFVHRQKVIRQYRGFFRVLKYIDDEQHKVQMKNEIKQSYSILKNANNAIEEEKLAISMSLTEGERKLKELKSMVGY---VDGKEKSDPDSWLNIKDKEDPRGRIGSSWPWQK 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102251.199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JB99_9PHAE2.140e-4373.58Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D8LRC8_ECTSI1.870e-3768.69Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YQF9_9STRA4.230e-2146.30Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S2K2A3_9STRA7.290e-1241.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A482SDI4_9ARCH1.320e-1135.14LYR motif-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S1Z286_9STRA1.620e-735.51Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2XK87_9STRA1.630e-634.58Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4JFV4_9STRA4.040e-633.05Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3V411_9STRA5.590e-529.82Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 14..67
e-value: 6.0E-7
score: 29.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102251contigH-elongata_contig102251:131..1497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102251.199.1mRNA_H-elongata_contig102251.199.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102251 2..2341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102251.199.1 ID=prot_H-elongata_contig102251.199.1|Name=mRNA_H-elongata_contig102251.199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MGGALGLKEFMHRKRMLDLYRGILKRARELEDKDVAAQARRQFKLSQEET
DPLKIKMAIADATMHLEALQGAVRSGAAVAGAGGGESWLDIDDPDDKRGR
VGTGFPWER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR