prot_H-elongata_contig102130.192.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102130.192.1
Unique Nameprot_H-elongata_contig102130.192.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: D8LM69_ECTSI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM69_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.020e-79
Identity = 116/132 (87.88%), Postives = 125/132 (94.70%), Query Frame = 0
Query:   20 MMAEECVLVDRCDRPTGRGSKVETHLNSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            MMAEEC+LVDR DRPTG  SKVETHL S+GLLLHRAFSVFLFD++GRVLMQRRADSKHTFAGYWTNTCCSHPLWND EMGTD+TTP+G+K +SEG+AAIAGATRAAVRKLGQELGIPAAQLPLEDF FLTKV
Sbjct:    1 MMAEECILVDRNDRPTGSASKVETHLTSKGLLLHRAFSVFLFDKKGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDVEMGTDMTTPRGEKSASEGDAAIAGATRAAVRKLGQELGIPAAQLPLEDFSFLTKV 132          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A835Z702_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z702_9STRA)

HSP 1 Score: 175 bits (444), Expect = 8.080e-52
Identity = 91/147 (61.90%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    6 FAEELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHLNSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEG-EAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            F +EL  +D EQAAMM E C++VDR D+P    +KV+ HL S GL LHRAFSVFLFD  GR+L+QRRA SKHTF GYWTN CCSHPLWNDFEMG D     GD  SS   EAA  GA RAA RKL QELG+PA QLP      +T++
Sbjct:   55 FTDELGQIDPEQAAMMEELCIVVDRDDKPLAPATKVQAHLCSEGLALHRAFSVFLFDSSGRMLLQRRALSKHTFPGYWTNACCSHPLWNDFEMGLD-----GDADSSSALEAAARGARRAAARKLEQELGVPAGQLPESALRLMTRI 196          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A7S2UUE2_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.310e-40
Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 0
Query:   14 DDEQAAMMAEECVLVDRCDRPTGRGSKVETHLNSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            DDEQ  MM E  + VDR D+  G  SK ETHL S GL LHRAFSVFLFD QGR+L+Q+R+  K TF  YWTNTCCSHPL    E+GTD+         ++ +AA  G  RAA+RKL QELGI  ++L ++DF +LTK+
Sbjct:   73 DDEQIQMMEERVITVDRHDKVVGEASKAETHLVSHGLKLHRAFSVFLFDTQGRLLLQQRSRDKITFPWYWTNTCCSHPLSVPSELGTDVLEAG---THNQDQAATLGCQRAAIRKLEQELGISPSELSVDDFIYLTKI 207          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A7C8RQJ0_ORBOL (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A7C8RQJ0_ORBOL)

HSP 1 Score: 139 bits (350), Expect = 4.340e-38
Identity = 79/145 (54.48%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    9 ELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHL--NSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            EL   D EQ  +M E C+++D  D+P G  SK   HL  N    LLHRAFSVFLFD +GR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            EAAI G  RAA RKL QELGIPA Q+PL+DF FLT++
Sbjct:   96 ELEGYDAEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGLLHRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIPAKQVPLDDFEFLTRI 228          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A0E9NIV4_SAICN (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NIV4_SAICN)

HSP 1 Score: 138 bits (347), Expect = 7.290e-38
Identity = 71/140 (50.71%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   14 DDEQAAMMAEECVLVDRCDRPTGRGSKVETHL--NSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            D EQ  +M E C+++D  D+P G  SK   HL  N    LLHRAFSVFLFD + R+L+Q+RAD K TF G WTNTCCSHPL    E G+DL +            A+ G  RAA+RKL QELGIPA+Q+P++ F +LT++
Sbjct:   18 DPEQVKLMEEVCIVIDENDKPLGSASKKTCHLMENINNNLLHRAFSVFLFDEENRLLLQQRADEKITFPGMWTNTCCSHPLSIPSETGSDLPS------------AVLGVKRAAIRKLDQELGIPASQVPIDKFTYLTRI 145          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: W7I8K3_9PEZI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7I8K3_9PEZI)

HSP 1 Score: 138 bits (348), Expect = 1.060e-37
Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = 0
Query:    2 AQKAFAEELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHL--NSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            A  A + EL   D+EQ  +M E C+++D  D+P G  SK   HL  N    LLHRAFSVFLFD +GR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            +AA+AG  RAA RKL QELGIP  Q+PLE F FLT++
Sbjct:   39 ASAAQSSELQGYDEEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGLLHRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------DAAVAGVRRAAQRKLDQELGIPVKQVPLEKFQFLTRI 178          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A7C8PEN1_ORBOL (Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Orbiliaceae TaxID=47021 RepID=A0A7C8PEN1_ORBOL)

HSP 1 Score: 139 bits (350), Expect = 2.320e-37
Identity = 79/145 (54.48%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    9 ELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHL--NSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            EL   D EQ  +M E C+++D  D+P G  SK   HL  N    LLHRAFSVFLFD +GR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            EAAI G  RAA RKL QELGIPA Q+PL+DF FLT++
Sbjct:  110 ELEGYDAEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGLLHRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIPAKQVPLDDFEFLTRI 242          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: A0A8J5X7Q7_DIALT (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7Q7_DIALT)

HSP 1 Score: 134 bits (338), Expect = 6.340e-36
Identity = 74/142 (52.11%), Postives = 87/142 (61.27%), Query Frame = 0
Query:   10 LSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHLNSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            L+ LD EQ  +M E  V+VDR DR  G  SKV  HLNS G +LHRAFSVFLFD   R+L+QRRA +K TF   WTNTCCSHPL    E+G D      D     G  A+ G  RAA+RKL  ELGIP      +D  FLT++
Sbjct:   45 LAGLDPEQVRLMEERVVVVDRADRVVGPESKVNAHLNSHGPMLHRAFSVFLFDEHNRLLLQRRAPTKVTFPSCWTNTCCSHPLHTPDELGVD------DGAGLLG-GAVTGCARAAIRKLEHELGIPLDTFKTDDLVFLTRI 179          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: B8MET0_TALSN (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) TaxID=441959 RepID=B8MET0_TALSN)

HSP 1 Score: 132 bits (331), Expect = 6.700e-36
Identity = 76/146 (52.05%), Postives = 92/146 (63.01%), Query Frame = 0
Query:    9 ELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHLN---SRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            +L   D+EQ  +M E C+++D  DRP G  SK   HL    SRGLL HRAFSVFLFD Q R+L+Q+RA  K TF   WTNTCCSHPL    E G +L+            AA+ G  RAAVRKL QELGI A Q+PL+ F FLT++
Sbjct:   47 DLDGYDEEQVRLMEEVCIVLDNDDRPIGSASKKACHLMTNISRGLL-HRAFSVFLFDSQNRLLLQQRAAEKITFPDLWTNTCCSHPLGIAGETGAELS------------AAVEGVKRAAVRKLDQELGIKAEQVPLDKFKFLTRI 179          
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Match: K2QUH8_MACPH (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Botryosphaeriaceae TaxID=45131 RepID=K2QUH8_MACPH)

HSP 1 Score: 134 bits (336), Expect = 8.260e-36
Identity = 73/145 (50.34%), Postives = 93/145 (64.14%), Query Frame = 0
Query:    9 ELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHL--NSRGLLLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGTDLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTKV 151
            +L+  D+EQ  +M E C+++D  D P G  +K   HL  N    LLHRAFSVFLFD Q R+L+Q+RA  K TF   WTNTCCSHPL    E G DL +            ++AGA RAA RKLG ELGIPAA++P+E+F FLT++
Sbjct:   54 DLAGYDEEQIRLMDENCIVLDENDVPIGSATKKVCHLMENINRGLLHRAFSVFLFDHQNRLLLQQRASEKITFPDMWTNTCCSHPLGVPTETGADLPS------------SVAGAKRAAQRKLGHELGIPAAEVPVEEFEFLTRI 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102130.192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM69_ECTSI2.020e-7987.88Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ec... [more]
A0A835Z702_9STRA8.080e-5261.90Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tr... [more]
A0A7S2UUE2_9STRA3.310e-4055.07Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fi... [more]
A0A7C8RQJ0_ORBOL4.340e-3854.48Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Or... [more]
A0A0E9NIV4_SAICN7.290e-3850.71Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Sa... [more]
W7I8K3_9PEZI1.060e-3751.97Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Dr... [more]
A0A7C8PEN1_ORBOL2.320e-3754.48Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Or... [more]
A0A8J5X7Q7_DIALT6.340e-3652.11Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Di... [more]
B8MET0_TALSN6.700e-3652.05Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ta... [more]
K2QUH8_MACPH8.260e-3650.34Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Bo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011876Isopentenyl-diphosphate delta-isomerase, type 1TIGRFAMTIGR02150TIGR02150coord: 25..150
e-value: 1.2E-32
score: 110.9
IPR011876Isopentenyl-diphosphate delta-isomerase, type 1PIRSFPIRSF018427Isopentenyldiphpt_isomcoord: 4..151
e-value: 2.4E-43
score: 146.1
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 52..141
e-value: 1.6E-8
score: 34.6
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 51..151
score: 11.676
NoneNo IPR availableGENE3D3.90.79.10coord: 2..151
e-value: 5.0E-45
score: 155.9
NoneNo IPR availablePANTHERPTHR10885ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASEcoord: 7..150
NoneNo IPR availablePANTHERPTHR10885:SF0ISOPENTENYL-DIPHOSPHATE DELTA ISOMERASE 1coord: 7..150
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 23..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102130contigH-elongata_contig102130:120..2117 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102130.192.1mRNA_H-elongata_contig102130.192.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102130 120..2117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102130.192.1 ID=prot_H-elongata_contig102130.192.1|Name=mRNA_H-elongata_contig102130.192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
AAQKAFAEELSVLDDEQAAMMAEECVLVDRCDRPTGRGSKVETHLNSRGL
LLHRAFSVFLFDRQGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDFEMGT
DLTTPKGDKMSSEGEAAIAGATRAAVRKLGQELGIPAAQLPLEDFCFLTK
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011876IsopentenylPP_isomerase_typ1
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf