mRNA_H-elongata_contig9930.17266.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI) HSP 1 Score: 101 bits (252), Expect = 7.310e-24 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 1 QSLPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
Q LP +VQRSAF LFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF
Sbjct: 165 QGLPVEVQRSAFLLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 215
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A7S2Q410_9DINO (Calmodulin (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q410_9DINO) HSP 1 Score: 60.8 bits (146), Expect = 1.110e-9 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 QSLPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCR--GSREERLRFLFDLF 153
Q +P V SAFR+FD G+L+FR FC ALALCC S +E++RF+FD+F
Sbjct: 80 QDMPKAVAESAFRMFDTDASGTLNFREFCCALALCCHLMSSVDEKMRFVFDMF 132
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 7.990e-9 Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 19 VQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
V + F LFD G + FR+FCRALA CCRG+R ERLRFLF LF
Sbjct: 89 VGDAVFGLFDSSSSGFVSFRDFCRALAWCCRGTRLERLRFLFCLF 133
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A7S1UK96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK96_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 5.540e-8 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 10 PSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
P D + LFD G +DFR+ CR L+LCC+GS E+ R+LFDLF
Sbjct: 75 PPDTLKRIGLLFDARQAGKVDFRDLCRGLSLCCKGSHREKTRWLFDLF 122
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A1V9Z6F4_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6F4_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 4.180e-6 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 7 LPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
LP + F +FD G GS+ F LA+ CRGSREE+L+F+FDL+
Sbjct: 61 LPGLLGERLFAVFDKNGSGSISFYELVAGLAILCRGSREEKLKFIFDLY 109
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A836CE72_9STRA (DUSP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE72_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 2.010e-5 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 1
Query: 73 FRNFCRALALCCRGSREERLRFLFDLF 153
FR+FCRA ALCCRGS +ER RFL DLF
Sbjct: 285 FRDFCRAQALCCRGSDDERRRFLMDLF 311
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: UPI001CF19353 (uncharacterized protein LOC114960660 isoform X2 n=5 Tax=Acropora TaxID=6127 RepID=UPI001CF19353) HSP 1 Score: 47.8 bits (112), Expect = 7.040e-5 Identity = 23/49 (46.94%), Postives = 28/49 (57.14%), Query Frame = 1
Query: 7 LPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
L D+ FR FD G G +D F LALC RGS EER + +FD+F
Sbjct: 81 LDGDLAERLFRAFDKDGNGRIDCDEFLGGLALCLRGSTEERGQIIFDMF 129
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A0A067CQZ0_SAPPC (CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQZ0_SAPPC) HSP 1 Score: 47.4 bits (111), Expect = 9.620e-5 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 7 LPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
LP + F +FD G++ F LA+ CRGSREE+L+F+FDL+
Sbjct: 63 LPGLLGERLFAVFDKNASGTISFYELVAGLAVLCRGSREEKLKFIFDLY 111
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Match: A9V7D4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7D4_MONBE) HSP 1 Score: 47.4 bits (111), Expect = 9.670e-5 Identity = 22/40 (55.00%), Postives = 23/40 (57.50%), Query Frame = 1
Query: 34 FRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLF 153
F L D G G L FR + A CC GSRE RLR LFD F
Sbjct: 236 FHLLDSDGNGDLSFRELLQGFAKCCYGSRESRLRALFDWF 275 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9930.17266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9930.17266.1 >prot_H-elongata_contig9930.17266.1 ID=prot_H-elongata_contig9930.17266.1|Name=mRNA_H-elongata_contig9930.17266.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp QSLPSDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLback to top mRNA from alignment at H-elongata_contig9930:750..902- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9930.17266.1 ID=mRNA_H-elongata_contig9930.17266.1|Name=mRNA_H-elongata_contig9930.17266.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=153bp|location=Sequence derived from alignment at H-elongata_contig9930:750..902- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9930:750..902- >mRNA_H-elongata_contig9930.17266.1 ID=mRNA_H-elongata_contig9930.17266.1|Name=mRNA_H-elongata_contig9930.17266.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=306bp|location=Sequence derived from alignment at H-elongata_contig9930:750..902- (Himanthalia elongata Himel1 dioecious)back to top |