mRNA_H-elongata_contig98445.17193.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: D8LCU6_ECTSI (ADP-ribose pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU6_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.490e-44 Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 1
Query: 1 TASVLVSMASSSAGNV--------NLPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
TAS L +MAS SA +LP+RY+WPRPAVTVDCLIY L+EG +PWILLIKRKN PFKG WALPGGFVD+NE L+AAARRELEEETGVT+R +VQTGAYG+
Sbjct: 71 TASTLPAMASLSASAAGRGGDTAPDLPFRYQWPRPAVTVDCLIYALDEG-KPWILLIKRKNDPFKGGWALPGGFVDQNEGLDAAARRELEEETGVTNRTMVQTGAYGD 177
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A6V1NPN0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NPN0_HETAK) HSP 1 Score: 110 bits (275), Expect = 6.420e-28 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 49 NLPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
+LPY+YRWPRP+VT D +I+ +EE P++LLIKR N PF+G+WALPGGF+D E LEA A REL+EETGV L Q GA+G+
Sbjct: 32 DLPYKYRWPRPSVTTDIVIFAVEEA-IPYVLLIKRGNPPFQGSWALPGGFLDLGEGLEACAARELQEETGVAGLPLAQVGAFGD 114
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A098SBX4_9BACT (NUDIX hydrolase n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098SBX4_9BACT) HSP 1 Score: 105 bits (262), Expect = 5.510e-26 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 52 LPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYG 297
+ Y Y +PRPA+TVDC+I+ L+E Q +LLI+RKN PF G WALPGGFVD +ESLEAAA RELEEETGV D + Q +G
Sbjct: 1 MAYTYEYPRPALTVDCVIFGLDESHQLKVLLIQRKNDPFAGRWALPGGFVDMDESLEAAALRELEEETGVRDVFIEQLFTFG 82
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A2D5NE24_9BACT (Nudix hydrolase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5NE24_9BACT) HSP 1 Score: 102 bits (254), Expect = 4.260e-25 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 16 VSMASSSAGNVNLPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYG 297
V+ ++ V +PY Y +PRPAVTVD ++ T + G +LLI+R + PF GAWALPGGFVDE E LEAAARRE+ EET T ++Q GAYG
Sbjct: 19 VANRRAAGHRVAVPYAYDYPRPAVTVDAVLATADAAGALQVLLIERGHEPFAGAWALPGGFVDEQEDLEAAARREMLEETHTTLGPMLQLGAYG 112
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A2D0NBS3_9BACT (NUDIX hydrolase n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0NBS3_9BACT) HSP 1 Score: 102 bits (255), Expect = 6.100e-25 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 52 LPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
+PY Y +PRPA+TVDC+I+ L+E + ILLI+R PFKG WALPGGFVD E LEAAA RELEEETGV D + Q +G+
Sbjct: 1 MPYTYEYPRPALTVDCVIFGLDESNKLKILLIQRALEPFKGDWALPGGFVDMEEDLEAAALRELEEETGVRDVFIEQLYTFGQ 83
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A1M3MSG8_9DELT (Nudix hydrolase domain-containing protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3MSG8_9DELT) HSP 1 Score: 102 bits (255), Expect = 7.710e-25 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 52 LPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
+P+ YR+PRPAVT D +++T+ +LLIKRK+ PFKG WALPGG+V+ENESLE A REL EETG+T L Q GA+G+
Sbjct: 1 MPFSYRYPRPAVTCDAVVFTMRADDLA-VLLIKRKDEPFKGRWALPGGYVNENESLERAVARELAEETGITSARLEQLGAFGD 82
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A1F3K8M2_9BACT (Nudix hydrolase domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3K8M2_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 8.950e-25 Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 52 LPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
+ Y Y +PRPAVTVDC+I + +P ILLIKRK PFK +WALPGGFVD NE+LE AA RELEEET +TD L+Q A+ E
Sbjct: 1 MAYSYEYPRPAVTVDCII--IRNTLKPEILLIKRKFEPFKDSWALPGGFVDSNETLEQAAIRELEEETNITDIDLLQMHAFSE 81
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A7S2XUX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUX9_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.070e-24 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 25 ASSSAGNVNLPYRY--RWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
A + + PYRY RWPRP+VT D ++T+E+G W+LLIKR PF+G WALPGGF+++ E L+A + RELEEET ++ +VQ GA+ +
Sbjct: 10 APGTEDDARTPYRYHYRWPRPSVTTDSAVFTIEDGAA-WVLLIKRLKEPFQGCWALPGGFLEDMEGLDACSARELEEETSISGLPMVQVGAFAD 102
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A813AIJ9_9DINO (NudF protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AIJ9_9DINO) HSP 1 Score: 100 bits (248), Expect = 2.150e-24 Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 1
Query: 25 ASSSAGNVNLPYRYRWPRPAVTVDCLIYTLE-EGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYG 297
A S+AG Y Y+WPRPAVTVD LI+ + E ILLI+R PFKG+WALPGGFVD++E L+ AA RELEEET T LVQ GA+G
Sbjct: 3 AVSTAG-----YTYKWPRPAVTVDTLIFNVHGETKDLRILLIERGGEPFKGSWALPGGFVDQDEDLDVAAARELEEETSTTGLPLVQFGAFG 89
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Match: A0A6C1QFY3_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6C1QFY3_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 2.170e-24 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 52 LPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKGAWALPGGFVDENESLEAAARRELEEETGVTDRALVQTGAYGE 300
+ Y Y +PRPAVT D +++ L EG ILLI+RKN PFKG WALPGGFVD E+LE A REL+EETG+ + L GA+ E
Sbjct: 1 MSYTYEYPRPAVTTDAVVFKLTEGENLHILLIQRKNEPFKGQWALPGGFVDMEETLEQCAARELKEETGIKNIKLYPLGAFSE 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98445.17193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig98445.17193.1 >prot_H-elongata_contig98445.17193.1 ID=prot_H-elongata_contig98445.17193.1|Name=mRNA_H-elongata_contig98445.17193.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp MASSSAGNVNLPYRYRWPRPAVTVDCLIYTLEEGGQPWILLIKRKNSPFKback to top mRNA from alignment at H-elongata_contig98445:241..811- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig98445.17193.1 ID=mRNA_H-elongata_contig98445.17193.1|Name=mRNA_H-elongata_contig98445.17193.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=571bp|location=Sequence derived from alignment at H-elongata_contig98445:241..811- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig98445:241..811- >mRNA_H-elongata_contig98445.17193.1 ID=mRNA_H-elongata_contig98445.17193.1|Name=mRNA_H-elongata_contig98445.17193.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig98445:241..811- (Himanthalia elongata Himel1 dioecious)back to top |