mRNA_H-elongata_contig9789.17133.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: D7G7Y2_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y2_ECTSI) HSP 1 Score: 212 bits (539), Expect = 5.470e-63 Identity = 102/137 (74.45%), Postives = 123/137 (89.78%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
SA+PLGMF+G+T +AITFMGGVYA+LPAYEADLFG KYVGPIHGR++ ++S AAL GPS +LSLRS SEM+AI DL+ K+DPARFQ+ F+TGVE+ + LI++KALTIGKLME+ PAGT DPTPFIYDST+YTMAGLM
Sbjct: 427 SAIPLGMFIGSTFLAITFMGGVYAVLPAYEADLFGTKYVGPIHGRLMASTSAAALFGPSFILSLRSSSEMSAINDLLEKVDPARFQKMFNTGVEDAQMLIDSKALTIGKLMELVPAGTPDPTPFIYDSTLYTMAGLM 563
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A7S0STR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR4_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.170e-50 Identity = 88/137 (64.23%), Postives = 111/137 (81.02%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
SAVPL F+G+T+VAI+ MGGV+A+LPAYEADLFG K VGPIHGRMLL SS A+LAGPS+LL+LR+ SE A+ +L+SKI P +FQQTF +E L+ AK+++IGKLM +AP GT+DPTP +YD+TMY M GLM
Sbjct: 455 SAVPLYGFIGSTVVAISMMGGVFAILPAYEADLFGTKNVGPIHGRMLLFSSAASLAGPSLLLNLRAYSEYQAVHNLISKISPEKFQQTFGAPIEKANELLAAKSISIGKLMVLAPQGTIDPTPHLYDTTMYAMGGLM 591
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A7S1GCY3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY3_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.620e-48 Identity = 84/137 (61.31%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
S +PL F+G++++AI+FMGGVYA LPAYEADLFGPKYVGPIHG+ LLAS+ A++ GP++LL+LR +E AI L +ID ++FQ TF GVE+ ++L+ AK++TI LM IAP GT+DPTP IY+STMYTMAG M
Sbjct: 444 STLPLYAFIGSSVMAISFMGGVYATLPAYEADLFGPKYVGPIHGKFLLASTVASVVGPTVLLALRGSAERGAIDALAGQIDASKFQATFGAGVESLEALVAAKSVTISSLMAIAPPGTLDPTPSIYNSTMYTMAGFM 580
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A813BUL3_9DINO (OxlT protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BUL3_9DINO) HSP 1 Score: 167 bits (422), Expect = 1.250e-47 Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
SA+PL F+ +T +AI+ MGG YALLPAYE+DLFG KYVG IHGR+LLASS +ALAGPS L+ +R +SE AI+DL+SK+DP FQ TF + L+EA++LTI +LM++ P G DPTP IYD+TMYT++GLM
Sbjct: 245 SALPLAAFIASTTLAISAMGGTYALLPAYESDLFGSKYVGGIHGRVLLASSASALAGPSALIWMRGQSEKNAIKDLISKVDPTDFQSTFGADPSQYEQLLEARSLTIPRLMDLVPEGIPDPTPHIYDTTMYTLSGLM 381
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: UPI000C782FD4 (uncharacterized protein LOC111700759 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C782FD4) HSP 1 Score: 161 bits (408), Expect = 4.100e-44 Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 13 LGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
L F G+T+ AI+ MGGV+A+LPAYEADL+GPKYVG IHGR LLA++ + + GP +LL+LR +E AI+DL+SK+DP+ F + F + +LIEAK LTI KLM I P GT+DP+PF+Y++TMYTMAGL+
Sbjct: 456 LAAFCGSTIAAISIMGGVFAVLPAYEADLYGPKYVGAIHGRFLLAATVSTIMGPGLLLNLRKMAESDAIKDLLSKVDPSAFVEKFGVDLSQANTLIEAKTLTISKLMTIMPQGTIDPSPFLYNNTMYTMAGLV 588
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A5A8E8W6_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8W6_CAFRO) HSP 1 Score: 162 bits (409), Expect = 7.510e-44 Identity = 80/137 (58.39%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
S L F + +AI+FMGG YALLPAYE+DLFG K+VG HGRMLLAS+ AA+AGPS L++LR R+ AAI DL++K DPA F F +E+ L+EAK LT+ L+E+ P GT DPTPF+YDSTM+TMAG+M
Sbjct: 510 STAALATFAASCTLAISFMGGTYALLPAYESDLFGTKHVGANHGRMLLASTAAAMAGPSALMALRERASSAAIDDLLTKADPAAFADRFRAPIEDAGRLLEAKRLTLSSLLEVCPPGTPDPTPFLYDSTMHTMAGVM 646
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A0V0QW39_PSEPJ (Major facilitator superfamily domain, general substrate transporter n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QW39_PSEPJ) HSP 1 Score: 159 bits (401), Expect = 5.990e-43 Identity = 76/137 (55.47%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
SAVPL F+G+T + I+ +GGVYA PAYE+ +FG KYVG IHG+MLL SS A GP + + +R+ E A++DL+SK+DPA+FQQ F G++ +SLIEAK LTI KLM+I P G DPTP++Y+S + T AGLM
Sbjct: 454 SAVPLYAFMGSTCIIISILGGVYATQPAYESQIFGNKYVGAIHGKMLLGSSFGAFVGPQLYIQMRNFEERKALKDLLSKVDPAKFQQHFKVGIDQAQSLIEAKTLTISKLMQIVPPGIKDPTPYLYNSALLTCAGLM 590
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A0K2U1R3_LEPSM (Uncharacterized protein n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2U1R3_LEPSM) HSP 1 Score: 155 bits (393), Expect = 4.640e-42 Identity = 74/133 (55.64%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 13 LGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
LG+F T+ +I+ MGG +A+LPAYEA L+G KYV IHGR LLA++ + + GP +LL+LR +E +AIQ+L+ K+DP +F + F T + +++LIEAK LTI KLM I PAGT+DP+PFIY++TMYTMAGL+
Sbjct: 437 LGVFCAATVASISVMGGTFAVLPAYEAGLYGSKYVQAIHGRFLLAATTSTIVGPYLLLTLRKMAESSAIQELLEKVDPIKFAEHFGTNIAQSQTLIEAKTLTISKLMTIMPAGTVDPSPFIYNNTMYTMAGLV 569
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A2E2MAN2_9HYPH (MFS transporter (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2E2MAN2_9HYPH) HSP 1 Score: 145 bits (366), Expect = 9.620e-42 Identity = 69/131 (52.67%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 19 MFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
MF G T++ T GG +A +PAY AD+FG KYVG IHGR+L A S A + GP + LR S ++++DL SK+DPA FQ+ F G++ +L+ AK +TI +LMEIAPAGT+DPTP +Y++TMY MAGL+
Sbjct: 2 MFYGATMIIFTMYGGGFATIPAYLADIFGTKYVGGIHGRLLTAWSTAGVLGPLAITKLREASIGSSVKDLASKVDPAAFQEKFGAGIDQLDTLVAAKTVTISRLMEIAPAGTVDPTPSLYNTTMYAMAGLL 132
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Match: A0A835Z4T5_9STRA (Major facilitator transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T5_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.720e-41 Identity = 80/137 (58.39%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 SAVPLGMFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAGPSILLSLRSRSEMAAIQDLVSKIDPARFQQTFSTGVENTKSLIEAKALTIGKLMEIAPAGTMDPTPFIYDSTMYTMAGLM 411
S VPL F T +AITFMGGVY++LPAYEADLFG KY+GPIHGRMLL S+ AAL GP+ LL LR SE A+ L++ DP +F F + LI +K LTI KLM+I P GT DP+PF+YD+TMY AGLM
Sbjct: 471 SPVPLAGFALATTIAITFMGGVYSILPAYEADLFGAKYIGPIHGRMLLYSTMAALIGPAALLKLRLISETQALHSLLAITDPDKFAAYFRAPISAADELITSKTLTIAKLMDIVPPGTPDPSPFVYDTTMYAAAGLM 607 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9789.17133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9789.17133.1 >prot_H-elongata_contig9789.17133.1 ID=prot_H-elongata_contig9789.17133.1|Name=mRNA_H-elongata_contig9789.17133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp MFVGTTLVAITFMGGVYALLPAYEADLFGPKYVGPIHGRMLLASSGAALAback to top mRNA from alignment at H-elongata_contig9789:6897..8778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9789.17133.1 ID=mRNA_H-elongata_contig9789.17133.1|Name=mRNA_H-elongata_contig9789.17133.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1882bp|location=Sequence derived from alignment at H-elongata_contig9789:6897..8778- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9789:6897..8778- >mRNA_H-elongata_contig9789.17133.1 ID=mRNA_H-elongata_contig9789.17133.1|Name=mRNA_H-elongata_contig9789.17133.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=786bp|location=Sequence derived from alignment at H-elongata_contig9789:6897..8778- (Himanthalia elongata Himel1 dioecious)back to top |