mRNA_H-elongata_contig97609.17112.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI) HSP 1 Score: 228 bits (582), Expect = 6.410e-72 Identity = 114/215 (53.02%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 13 QIWGEELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVSS--TLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
Q WGE++H+GRYDL ++ K+ + R+KRATAL+T LL K+ G ++ T+MDMG+ GSTAR A + GCNVVCID S G NA NA +A GLSDKIIIPGERS+F T +P+A+MD V+S DAFGHAS + +KEAARVLK GG+M F+D S+ A+P L +++ +IG+++L SP ++E G YGLE VEFDD++ N S+HY
Sbjct: 2 QAWGEDIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTIMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNAVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGHASTEHHRAIKEAARVLKPGGVMAFSDFMQSDDADPTKLGEVYQHIGISRLASPGLYEEWGNAYGLEPVEFDDRTSNFSVHY 216
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A6H5KC33_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.950e-55 Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 1
Query: 7 HAQIWG-EELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLR----------PGVSSTLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+ Q+WG E +HVG Y F+GED +L+G R+ +A++L TE LL++ + P T+MDMG+G+G TARA A K GC VVCI+ +S N N T GL DK+I+PGE+SFF+TG+P A+ D V S DA HA + + EAARVLK GG M+FTDI S++A+P L +++ I + + +PE + GK +GLE VEF D + NL++HY
Sbjct: 32 YRQVWGGEHIHVGLYTRFEGEDVELKGVDRISKASSLCTEELLSRCFPAVATVTSNGEAAPPASECTMMDMGSGYGGTARAAAKKLGCKVVCINVASRENEINTAITKDAGLQDKVIVPGEKSFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQSKEADPKDLQEVYQRIHLDDMATPESYAKWGKAHGLEFVEFVDMTDNLALHY 257
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: D7G7W9_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 177 bits (448), Expect = 6.700e-50 Identity = 91/223 (40.81%), Postives = 131/223 (58.74%), Query Frame = 1
Query: 1 FAHAQIWGEELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQL------LRPGVSSTLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
F H GE +H+G + +GE KL G R+K+A++L+TE +L++ P T++D+G G+G TAR A K GC VVCI+ S N N T + GL DK+I+PGE+SFF+TG+P A+ D V S DA H+ + M EAARVLK GG M+F+DI ++ +P L ++ + + +PE + GK +GLE VEF D + NL+ HY
Sbjct: 8 FQHEVWGGEHIHIGLHSKLEGEHVKLEGVERIKKASSLSTEEILSRCFPSGTNGNGAPPSAECTMVDLGCGYGGTARVAAKKLGCKVVCINVSKRENETNVAMTKEAGLQDKVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQFKETDPKDLQDVYNRCHLEDMSTPEEYIKWGKVHGLEFVEFVDMAENLATHY 230
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.870e-45 Identity = 91/217 (41.94%), Postives = 128/217 (58.99%), Query Frame = 1
Query: 7 HAQIWGEE-LHVGRYDLFDGE-DDKLRGQARVKRATALTTEILLNKLVQLLRPGVSSTLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+ Q+WG +HVG YD D + D + R+K A+ L+ + L L SS +MDMG+ +G AR A +GC V CID S N N + TA GL+DK++IPGERSFF+TG P+ D VVS D+ HA + ++EAARVLK GG ++FTDI S A A L ++ I + +GSP ++A + GL+LV F+D++ NL+ HY
Sbjct: 30 YKQVWGGSFIHVGLYD--DPQVTDSMDPMERIKLASELSAKRLFATAEPL---DSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHY 241
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A6H5KZ03_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ03_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.350e-42 Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 13 QIWGEELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVSS-TLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHAS 414
Q WGE++H+GRYDL ++ K+ + R+KRATAL+T LL K+ G ++ T+MDMG+ GSTAR A + GCNVVCID S G N NA +A GLSDKIIIPGERS+F T +P+A+MD V+S DAFGHAS
Sbjct: 4 QAWGEDIHIGRYDLLSMDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNTVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGHAS 138
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: D7G5Z7_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 156 bits (394), Expect = 8.440e-41 Identity = 82/228 (35.96%), Postives = 127/228 (55.70%), Query Frame = 1
Query: 7 HAQIWG-EELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVS------------STLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+ ++WG E +HVG Y + E+ KL R+K+A+ L E LL + G + ST++DMG+G+G +AR A GC V CI+ +S N N + G+ D +IIPGE+S+F TG+P A + V S DA HA + + EAAR+LK GG M+F D+ + A+P L +++ + + LG+P+ + + YGL VEF D++P++ HY
Sbjct: 344 YFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAEELLARCFPASANGTNGTNGDGAPHTSESTMVDMGSGYGGSARLAAKTLGCKVYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLQEVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHY 571
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A6H5L7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.050e-39 Identity = 83/231 (35.93%), Postives = 127/231 (54.98%), Query Frame = 1
Query: 7 HAQIWG-EELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVS------------STLMDMGAGFGSTARAMANKFGC---NVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+ ++WG E +HVG Y + E+ KL R+K+A+ L E LL + G + ST++DMG+G+G +AR A GC NV CI+ +S N N + G+ D +IIPGE+S+F TG+P A + V S DA HA + + EAAR+LK GG M+F D+ + A+P L ++ + + LG+P+ + + YGL VEF D++P++ HY
Sbjct: 198 YFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAEELLARCFPASANGTNGTNGNGAPPTSESTMVDMGSGYGGSARLAAKTLGCKAMNVYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLKDVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHY 428
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A6H5L6E6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 147 bits (370), Expect = 8.520e-39 Identity = 79/231 (34.20%), Postives = 126/231 (54.55%), Query Frame = 1
Query: 7 HAQIWG-EELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVS------------STLMDMGAGFGSTARAMANKFGCNVV---CIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+ ++WG E +HVG Y + E+ KL R+++A+ L E LL + G + ST++DMG+G+G +AR A GC + CI+ +S N N + G+ + +IIPGE+S+F TG+P A + V S DA HA + + EAAR+LK GG M+F D+ + A+P L +++ + + LG+P+ + YGL VEF D++P++ HY
Sbjct: 141 YFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIEKASILNAEELLARCFPASANGTNGTNGNGAPPTSESTMVDMGSGYGGSARLAAKTLGCKAIVVYCINVTSRENDVNRALSKAAGIENLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNNADPKDLQEVYERVRLQDLGTPKSYAKWAASYGLTFVEFSDRTPDMKTHY 371
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: L1JQG8_GUITC (Methyltransf_11 domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JQG8_GUITC) HSP 1 Score: 129 bits (324), Expect = 7.460e-33 Identity = 78/232 (33.62%), Postives = 122/232 (52.59%), Query Frame = 1
Query: 7 HAQIWG-EELHVGRYDLFDGEDDK------LRGQARVKRATALTTEILLNKLVQLLRP---GVSSTL-MDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSP----EMFEASGKHYG--LELVEFDDQSPNLSIHY 651
+ IWG + HVG Y + D ++G++ L + L K+++L +P G S L MDMGA +G ARA++ K+GC VVC++ S N N R ++ + DKII+PGE SF T + D VS D+ HA ++ EAARVL+ GG+ +F+DI + + + L ++ IG+ +GSP E +GK +L ++D SP +++HY
Sbjct: 14 YLTIWGGDHCHVGIYTAEEEAQDMQPPAGGVKGESTESDTILLASNRSLEKILELSKPAFEGRSEGLAMDMGAAYGGCARALSKKYGCKVVCVELSKRENEVNIQRNVELKMQDKIIVPGELSFLDTQQEAGVFDCCVSEDSILHAGKARPAVVAEAARVLRKGGLFVFSDIMQKDCVDTSTLKDVYDRIGLEDMGSPAKYIEWASQAGKLLASSFQLKRYEDFSPQIAVHY 245
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Match: A0A1Z1WHU0_9ACTN (Methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A1Z1WHU0_9ACTN) HSP 1 Score: 126 bits (317), Expect = 8.230e-32 Identity = 79/213 (37.09%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 16 IWG-EELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLLRPGVSSTLMDMGAGFGSTARAMANKFGCNVVCIDFSSGLNAANATRTAKMGLSDKIIIPGERSFFKTGIPSATMDGVVSLDAFGHASGDTDGIMKEAARVLKCGGIMLFTDIFYSEKAEPAALSKLFTNIGVTKLGSPEMFEASGKHYGLELVEFDDQSPNLSIHY 651
+WG E++H G Y+ +D E V A+ T E L ++L L PG T++D+G+G+G TAR +A++FGC+VV ++ S N + AK GL D +I SF + D V SL+AF H SGD ++ EAARVLK GG + FTDI ++ AL + + +GV L +P + GL V+FDD +P+++ HY
Sbjct: 48 VWGGEDIHTGIYE-YDAEP--------VADASRRTVERLADRLAGRLSPG--RTVLDLGSGYGGTARYLADRFGCDVVALNLSEAQNERHRAANAKRGL-DHLIEVVTGSFHEVPYGEGHFDAVCSLEAFCH-SGDRSRVLSEAARVLKPGGALAFTDIMAADDTPAEALRPVVSRLGVDALATPTFYLDQLAELGLAPVDFDDHTPHIARHY 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97609.17112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig97609.17112.1 >prot_H-elongata_contig97609.17112.1 ID=prot_H-elongata_contig97609.17112.1|Name=mRNA_H-elongata_contig97609.17112.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp FAHAQIWGEELHVGRYDLFDGEDDKLRGQARVKRATALTTEILLNKLVQLback to top mRNA from alignment at H-elongata_contig97609:1064..2341+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig97609.17112.1 ID=mRNA_H-elongata_contig97609.17112.1|Name=mRNA_H-elongata_contig97609.17112.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1278bp|location=Sequence derived from alignment at H-elongata_contig97609:1064..2341+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig97609:1064..2341+ >mRNA_H-elongata_contig97609.17112.1 ID=mRNA_H-elongata_contig97609.17112.1|Name=mRNA_H-elongata_contig97609.17112.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1302bp|location=Sequence derived from alignment at H-elongata_contig97609:1064..2341+ (Himanthalia elongata Himel1 dioecious)back to top |