mRNA_H-elongata_contig97410.17100.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: D7FJH9_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH9_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.930e-32 Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 VPPTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQVTNVLRR 363
VPP ATVIT++EL +MK+RAIITSLADE+AAR RE LEE+Q+A LKSDIEVE+MAHD +VKK+ATEKLD N+D+VKMLNSLGARAAAFTIRD+Q+ RR
Sbjct: 62 VPPKATVITEEELAQMKRRAIITSLADEEAARVGRENMLEERQRAXXXXXXXXXXXXXXXXXXXLKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQLAEKDRR 182
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A835YY84_9STRA (Tumor suppressor, Mitostatin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY84_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.210e-15 Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 7 PTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQVTN 351
P T+++ EL +++ AII S ++E A R M+QM +AK KA +SD+E+E +A + +V+K+A EKLD N+D+VKMLNSLG+RAAAFTIRD+Q+ +
Sbjct: 58 PNTTMLSTKELHSIREHAIIKSNSEEQAERXXXXXXXXXXXXXXXXXXXXMIQMADEAKAKAKRSDLELETIAREQLVRKMANEKLDENNDLVKMLNSLGSRAAAFTIRDQQLAD 172
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A7S2V109_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V109_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.910e-11 Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 13 ATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQVTNVLR 360
A VI++ +L MK R +I + AD A ++E+ KA KSDIE+ +MA D V+K+A EK++ D+VK+LN+LGARAAAFTIRD Q++ R
Sbjct: 33 AVVISRRDLQAMKARTVIKTEADMRAEHLAKEEERXXXXXXXXXXXXXXXXXXXXXXXKAKKSDIEIAQMARDQTVRKLAEEKMNEESDMVKLLNTLGARAAAFTIRDEQLSEKAR 148
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A8J2SPE8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPE8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.190e-10 Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 1 VPPTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQV 345
+P A VI+ EL +++ I + A+ + E K KAARARK RM + +K KA KS +E+EK A ++++A + LD N D+VK L +GARAAAFTIRD+Q+
Sbjct: 21 LPARAAVISAAELRRIQGSTRIITAAEIQKDKDELEAIHAVKHKAARARKDRMRALAAASKNKAKKSTMELEKEARKETIRQMADKTLDENLDLVKYLRGIGARAAAFTIRDQQL 135
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: T0RIP4_SAPDV (TPH domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RIP4_SAPDV) HSP 1 Score: 66.6 bits (161), Expect = 2.260e-10 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 1 VPPT-ATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIE-VEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQV 345
VP T ATV+ EL++++ I + A+ +A +E++ E+ + ARARKQ M++ +A +A KSDIE + +DAI K+ A K D HD VK++ +LGARAAAFTIRD Q+
Sbjct: 70 VPATIATVLPPHELSRIRGTTRILTDAEREAIAAKKEEDTEKLRIHARARKQHMMERAAEAATRAPKSDIEQIFDAENDAIRKRAAMLK-DQAHDSVKLMKTLGARAAAFTIRDEQI 185
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A067BWU6_SAPPC (TPH domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BWU6_SAPPC) HSP 1 Score: 66.2 bits (160), Expect = 3.060e-10 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 13 ATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIE-VEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQV 345
ATV+ EL++++ I S A+ +A +E++ E+ + ARARKQ M++ +A +A KSDIE + +DAI K+ A K D HD VK++ +LGARAAAFTIRD Q+
Sbjct: 75 ATVLPPHELSRIRGTTRILSDAEREAMAAKKEEDNEKLRIHARARKQHMMERAAEAATRAPKSDIEQIFDAENDAIRKRAAMLK-DQAHDSVKLMKTLGARAAAFTIRDEQI 185
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A7S3UXE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXE1_HETAK) HSP 1 Score: 64.3 bits (155), Expect = 1.460e-9 Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 1 VPPTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQVTN 351
VP A+++T+ +L +MK A++ + D R + E E K+ KSD+EVEK+A D ++++A K+ D+VK+LN+LGARAAAFTIRD+Q+ N
Sbjct: 76 VPANASIVTRSDLMRMKAGAVLKTEQDLINEREAAEAEREIKEXXXXXXXXXXXXXXXXXXXXXXKSDLEVEKIARDQQIRQMAEAKMTEETDLVKLLNTLGARAAAFTIRDQQLEN 192
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A1V9ZPK3_9STRA (TPH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPK3_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 9.360e-9 Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 34 ELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQV 345
E+ +++ I + +D +A +E+++E + ARARKQ M++ +A +A KS+IE A + ++K A D HD VK++ +LGARAAAFTIRD Q+
Sbjct: 84 EIARIRSTTRILTDSDREAIAAKKEEDMERLRIHARARKQHMMERAAEAATRAPKSEIEQIFEAENEAIRKRAAMLKDQAHDSVKLMKTLGARAAAFTIRDEQI 187
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A2D4CJF6_PYTIN (TPH domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJF6_PYTIN) HSP 1 Score: 61.6 bits (148), Expect = 1.120e-8 Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 4 PPTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQ 342
PP V+ + +L ++KQ A I + A + RE LE+ + +A+ARK+ M ++ DA +A KS+I+ A V + A D +HD VK++ +LGARA AFTIRD Q
Sbjct: 96 PPAPRVVDESDLERIKQEAKILTPAHMEELAAKREAELEQIRLSAKARKEHMQRLGEDAARRAPKSEIDQLLYAEKQQVLRKAAILKDLDHDSVKLMRTLGARAQAFTIRDEQ 208
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Match: A0A1V9ZC41_9STRA (TPH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC41_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.370e-8 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 13 ATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKQRMVQMELDAKMKALKSDIEVEKMAHDAIVKKIATEKLDGNHDVVKMLNSLGARAAAFTIRDRQV 345
A V+ EL +++ I S AD +A +E+ E+ + ARARKQ M++ A +A KS+IE A + ++ A D HD VK++ +LGARAAAFTIRD Q+
Sbjct: 69 AHVVEPTELDRIRGSTRILSDADNEAIAAKKEEEAEKLRIHARARKQHMMERAAHAAKRAPKSEIEQIFEAENQAIRTRAAMLKDQAHDSVKLMKTLGARAAAFTIRDEQI 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97410.17100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig97410.17100.1 >prot_H-elongata_contig97410.17100.1 ID=prot_H-elongata_contig97410.17100.1|Name=mRNA_H-elongata_contig97410.17100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp VPPTATVITKDELTKMKQRAIITSLADEDAARTSREKNLEEKQKAARARKback to top mRNA from alignment at H-elongata_contig97410:312..1709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig97410.17100.1 ID=mRNA_H-elongata_contig97410.17100.1|Name=mRNA_H-elongata_contig97410.17100.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-elongata_contig97410:312..1709- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig97410:312..1709- >mRNA_H-elongata_contig97410.17100.1 ID=mRNA_H-elongata_contig97410.17100.1|Name=mRNA_H-elongata_contig97410.17100.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig97410:312..1709- (Himanthalia elongata Himel1 dioecious)back to top |