mRNA_H-elongata_contig97007.17074.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: D7FJA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJA2_ECTSI) HSP 1 Score: 182 bits (463), Expect = 7.320e-54 Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GGASVAFP+MTLAFGI P+VARDFSFMIQSAGMTAAAATI IMQVQVEM+S+++AT+GGV G+ILGL E+AP LEPAYSKM FV TWAAFACSLFWLNRL GRRVF SIP
Sbjct: 99 EGGASVAFPIMTLAFGIAPIVARDFSFMIQSAGMTAAAATIVIMQVQVEMHSLLWATVGGVAGIILGLEEVAPRLEPAYSKMFFVSTWAAFACSLFWLNRLMGRRVFLSIP 209
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: A0A7S2UZR2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR2_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.700e-39 Identity = 74/111 (66.67%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GGASVAFPVMTLA GI P VARDFSFMIQS GMTAAA TI M+V++EM+S++Y TIGG+ G+I GL +AP L P YSKM FV W +FA SL+ LNRLHGR+V++ IP
Sbjct: 55 EGGASVAFPVMTLALGIAPPVARDFSFMIQSCGMTAAAFTIFWMRVKIEMHSLIYCTIGGLAGIIFGLEYVAPELTPPYSKMYFVVIWFSFAFSLYNLNRLHGRKVYDEIP 165
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: A0A7S2SVF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF7_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.710e-39 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVF 321
+GGA+VAFPVMTL FGILP+VARDFSFMIQS GMTAA+ TI M V VE ++ + TIGG+ G+I GL ++AP LEP+YSKM FV W AFA SL+WLNR+ R+V+
Sbjct: 24 EGGAAVAFPVMTLIFGILPIVARDFSFMIQSVGMTAASLTILWMGVLVEWKALCFVTIGGIGGIIYGLEKVAPQLEPSYSKMYFVVIWGAFAASLYWLNRIRKRKVY 130
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: A0A7S3XM94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM94_HETAK) HSP 1 Score: 136 bits (342), Expect = 4.900e-36 Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GGASVAFPVMTLAFGI P +ARDFSFMIQS GM AA TI M+VQVE +S++Y ++GG G++LGL +AP L P SKM FV W AFA SL+ LNRL+GRRV+ +P
Sbjct: 107 EGGASVAFPVMTLAFGIKPAIARDFSFMIQSCGMVAAGFTILAMRVQVEYHSLLYCSLGGFLGMVLGLEYVAPSLTPPESKMYFVVIWFAFAFSLYQLNRLYGRRVYGMVP 217
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: F0Y040_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y040_AURAN) HSP 1 Score: 132 bits (333), Expect = 1.020e-34 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVF 321
+GGASVAFPVMTLA + P VA+ FS+MIQS GMTAAA I MQV+VE SI Y ++GGV GLI GL EIAP+L P Y+KM FV W +FA SL++LNR+HGR+V+
Sbjct: 74 EGGASVAFPVMTLAMDVKPHVAKQFSYMIQSVGMTAAAFVILYMQVRVEWKSITYCSVGGVVGLIYGLEEIAPVLTPPYAKMYFVVIWGSFAASLYYLNRIHGRKVY 180
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: F0Y077_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y077_AURAN) HSP 1 Score: 132 bits (331), Expect = 4.460e-34 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVF 321
+GGASVAFPVMTLA + P VA+ FS+MIQS GMTAAA I MQV+VE SI Y +IGG+ GLI GL EIAP+L P Y+KM FV W +FA SL++LNR+HGR+V+
Sbjct: 139 EGGASVAFPVMTLAMDVKPHVAKQFSYMIQSVGMTAAAFVILYMQVRVEWKSITYCSIGGMVGLIYGLEEIAPVLTPPYAKMYFVVIWGSFAASLYYLNRIHGRKVY 245
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: A0A1S3JIM9_LINUN (uncharacterized protein LOC106173617 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIM9_LINUN) HSP 1 Score: 130 bits (328), Expect = 8.560e-34 Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GG +VAFPVMTLAFGI P +ARDFS MIQSAGMTAAA TI M+VQ+E +SI++ ++GG G I+GL I P L P KM FVC W +FA LFWLNR H RR F IP
Sbjct: 138 EGGGAVAFPVMTLAFGIKPSIARDFSLMIQSAGMTAAAFTIIWMKVQLEWHSIIFCSLGGGIGTIVGLEFIDPRLTPQQKKMGFVCIWFSFAFVLFWLNRYHKRRTFPKIP 248
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: UPI000A2A4B0E (uncharacterized protein LOC110244058 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4B0E) HSP 1 Score: 129 bits (324), Expect = 1.710e-33 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GGASVA+P+MTLAF I P VARDFSFMIQS GMTAAA TI M+V E +S+V+ ++GGV G+I GL I PLL P + KM FVC W FA +LF LNR R+ ++ IP
Sbjct: 107 EGGASVAYPIMTLAFNIKPSVARDFSFMIQSCGMTAAAFTIIFMRVHTEQFSLVFCSLGGVIGMIFGLEVIDPLLTPPFKKMGFVCIWFTFAFALFLLNRYRDRKTYQRIP 217
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: UPI000C054A02 (uncharacterized protein LOC111319879 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C054A02) HSP 1 Score: 124 bits (312), Expect = 2.710e-32 Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GG +VAFPVMTLAF I P VARDFS MIQS GMTAAA TI M+VQ+E +S+ + ++GG+ G+I+GL I P L P KM FVC W AFA +LF LNR H R+ + +IP
Sbjct: 4 EGGGAVAFPVMTLAFSIAPEVARDFSLMIQSCGMTAAAFTIFWMRVQLEWHSVTFCSLGGIFGMIIGLEFIDPQLTPPQKKMGFVCMWFAFAFALFLLNRYHKRKTYTTIP 114
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Match: A0A2B4RQ42_STYPI (Uncharacterized protein n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQ42_STYPI) HSP 1 Score: 126 bits (316), Expect = 3.020e-32 Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 1 KGGASVAFPVMTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGVCGLILGLAEIAPLLEPAYSKMIFVCTWAAFACSLFWLNRLHGRRVFESIP 333
+GG +VAFP+MTLAF I P VARDFS MIQS GMTAAA TI M VQ+E +SI +IGG+ G+I+GL I P L PA KM FVC W AFA +LF LNR H R+ + +IP
Sbjct: 97 EGGGTVAFPIMTLAFSIAPEVARDFSLMIQSCGMTAAAFTILWMHVQLEWHSITLCSIGGIFGMIIGLEFIDPQLTPAQKKMGFVCVWFAFAFALFLLNRYHKRKTYTTIP 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97007.17074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig97007.17074.1 >prot_H-elongata_contig97007.17074.1 ID=prot_H-elongata_contig97007.17074.1|Name=mRNA_H-elongata_contig97007.17074.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp MTLAFGILPVVARDFSFMIQSAGMTAAAATIAIMQVQVEMYSIVYATIGGback to top mRNA from alignment at H-elongata_contig97007:1753..2382+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig97007.17074.1 ID=mRNA_H-elongata_contig97007.17074.1|Name=mRNA_H-elongata_contig97007.17074.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=630bp|location=Sequence derived from alignment at H-elongata_contig97007:1753..2382+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig97007:1753..2382+ >mRNA_H-elongata_contig97007.17074.1 ID=mRNA_H-elongata_contig97007.17074.1|Name=mRNA_H-elongata_contig97007.17074.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at H-elongata_contig97007:1753..2382+ (Himanthalia elongata Himel1 dioecious)back to top |