mRNA_H-elongata_contig96846.17059.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: D7FXF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF4_ECTSI) HSP 1 Score: 213 bits (541), Expect = 6.770e-68 Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 1
Query: 145 GSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERN 510
G G+AVWNHPIDVHFG DSL GWPR+ +EVWSVD CDRSELAGYGMIFVP+SPG+YDLDCVTW PQGTL D+LSA +LGAPP+L EV TAASGADRFELRTET G+V+ HL+V++AGFA+RN
Sbjct: 27 GEGSAVWNHPIDVHFGTDSLSGWPRVLVEVWSVDGCDRSELAGYGMIFVPTSPGTYDLDCVTWRPQGTLGDQLSAALLGAPPNLVEVTTAASGADRFELRTETAGTVVFHLEVLVAGFADRN 148
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A7S1GA20_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA20_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.280e-46 Identity = 69/166 (41.57%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGF 498
VH++G+V GA FP+ RL R+++V HW ++ G E TH+ + A W+HPIDVH+ S+ GWP++ +EVW D+ R+E++GYG + VP++PG + +D +TW P+G+ +RLSA +LG P L++ DR EL TETRG V L +++ GF
Sbjct: 50 VHILGQVVGASEFPQTRLLCRWRVVADTSHWDLVTGENEGQTHVVDKEEEEFAAWSHPIDVHYSCSSIEGWPQLAVEVWQQDEHGRNEISGYGSVRVPTAPGVHHVDVMTWRPEGSFVERLSAAMLGGHPQLKDTDIVTESVDRVELSTETRGVVHVELQLLVKGF 215
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A6P7Z825_9AMPH (B9 domain-containing protein 2-like n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7Z825_9AMPH) HSP 1 Score: 154 bits (390), Expect = 1.690e-44 Identity = 68/166 (40.96%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGF 498
VH+IG++TGA GFP++ L+ ++ +++ W ++ G E T +D A W+HPID+HF L GWP++ ++VW D R EL GYG VPSSPG + L+CVTW PQG+ ++LS +G P L+ SGADR+ LRT G + L ++L F
Sbjct: 17 VHIIGQITGATGFPQHSLFCKWG-IHAGSAWKLLSGVAEGQTQVDNPQNEEMAFWSHPIDIHFATKGLQGWPKLHLQVWHQDSFGRLELYGYGFCHVPSSPGFHQLECVTWRPQGSWQEQLSQLFVGGGPQLKNSDLIYSGADRYRLRTTAMGKIHLQLGILLRHF 181
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: B3RKM0_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RKM0_TRIAD) HSP 1 Score: 154 bits (388), Expect = 2.290e-44 Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNV 513
VH+IGE+ GA GFP N LY ++ +++ W ++ G E T +D A+W+HPIDVH+ SL GWP+M+ EVW D R EL GYG +P+SPG++D++CVTW P GT D+L +G +++ + DR L TE G++ L +IL F + V
Sbjct: 4 VHIIGEIIGATGFPSNNLYCKWS-IHTENAWRLLEGNHEGQTQVDNPQNEEFAIWDHPIDVHYATKSLYGWPKMYFEVWHQDRFGRHELYGYGFCNLPTSPGTHDVECVTWRPTGTFQDQLRQVFVGGGMEIKDPSAIYTSTDRCNLHTEAMGTIRLQLGIILRHFDKYGV 173
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A7S0VBP4_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VBP4_9CHLO) HSP 1 Score: 154 bits (388), Expect = 2.360e-44 Identity = 65/174 (37.36%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNVHTG 522
VH+IG++ GA GF L+ ++ +V + +W ++ G + THLDE +W+HP+DVHF LVGWP++ ++WS D R+++ GYG VP++PG+++L C TW P+G+L +++ + LG P LR + DR+ LRT T G V L ++ F + +V TG
Sbjct: 4 VHIIGQLLGATGFNSQNLFCKWGIV-AGRNWELLEGNDQGQTHLDEAEDGEMVIWSHPLDVHFATCGLVGWPKIHFQIWSQDSYGRNDIMGYGFCHVPTTPGTHELSCATWVPEGSLGEKIRSFFLGGNPRLRAEEVVFTPQDRYRLRTTTSGLVHLSLSLMFKDFGKNHVQTG 176
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A1Y1IHR7_KLENI (B9 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHR7_KLENI) HSP 1 Score: 152 bits (383), Expect = 1.350e-43 Identity = 66/171 (38.60%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNV 513
VH+IG++ GA GF ++ ++ +V + +W ++ GT + T +D AVW+HPIDVH+ L GWP+++ +VW D R+++ GYG VP+ G +DLDCVTW P+G++ +R+SA +G P L+ T + DRF LRT G+V + V+L FA N+
Sbjct: 4 VHIIGQILGAEGFKDRNVFCKWGIV-AGSNWDLLEGTDQGQTQVDHPPEGEDAVWSHPIDVHYACRGLSGWPKLYFQVWHQDIHGRNDICGYGFCHVPTEAGCFDLDCVTWLPEGSVLERISAFFIGGGPRLKVEETVYNSGDRFRLRTRAGGTVHIQISVLLKDFARHNI 173
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A836CAK3_9STRA (B9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK3_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.190e-43 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 157 AVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNVHTGAA 528
AVWNHP+D+H+G DS GWPR+ ++VW +D DRS AGYGM VP +PG++D++CVTW P+GT RLSA LGAPP L + T S ADR LR E+ G+V HL+VI AG AE G+A
Sbjct: 1 AVWNHPLDIHYGMDSFRGWPRLQLQVWQLDAHDRSAAAGYGMCAVPLAPGAHDVECVTWRPRGTFFQRLSALFLGAPPQLEDARTITSCADRTGLRVESCGTVRLHLEVITAGMAEVGARLGSA 124
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A6F9D6U6_9ASCI (B9 domain-containing protein 2-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D6U6_9ASCI) HSP 1 Score: 150 bits (378), Expect = 7.450e-43 Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNV 513
VH+IG++ GA FP++ L+ ++ +++ W ++ G E T +D A W+HPIDVH+ A L GWPR+ ++VW D RSEL GYG + VP+SPG++ ++CVTW P GT+ + L+ +G P L+ SGADR++LRT G V L++I F + V
Sbjct: 4 VHIIGQLVGASEFPEHSLFCKWG-IHAGGAWKLIAGLKEGQTQVDNPENEEFAYWSHPIDVHYAAKGLQGWPRIHVQVWRQDSLGRSELYGYGFVHVPTSPGTHKIECVTWRPIGTMQEELTQFFVGGCPQLKNADLIYSGADRYKLRTTAMGKVHLKLNLIFRNFDKYGV 173
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: H9G827_ANOCA (B9 domain containing 2 n=14 Tax=Bifurcata TaxID=1329961 RepID=H9G827_ANOCA) HSP 1 Score: 150 bits (378), Expect = 7.450e-43 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGF 498
VHVIG++ GA GFP++ L+ ++ +++ W ++ G E T +D A W+HPIDVHF L GWP++ ++VW D R+EL GYG + VPSSPGS+ L+CVTW P G+ ++LS +G P L +GADR+ L+T G+V L VIL F
Sbjct: 4 VHVIGQIVGASGFPRSSLFCKWG-IHTGGAWKLLSGLREGQTQVDHPQLDDVAYWSHPIDVHFATKGLQGWPKLHVQVWHQDSFGRTELYGYGFLHVPSSPGSHQLECVTWRPLGSWQEQLSQLFVGGGPQLLNSDLIYTGADRYRLQTCAMGTVHLQLTVILRNF 168
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Match: A0A401PN65_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PN65_SCYTO) HSP 1 Score: 150 bits (379), Expect = 7.540e-43 Identity = 67/171 (39.18%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 1 VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSGTAVWNHPIDVHFGADSLVGWPRMFIEVWSVDDCDRSELAGYGMIFVPSSPGSYDLDCVTWAPQGTLSDRLSATVLGAPPHLREVGTAASGADRFELRTETRGSVLCHLDVILAGFAERNV 513
VH+IG++ GA GFP+N L+ ++ L W ++ G + T +D A W+HPID+H+ L GWP+++I+VW D R+EL GYG +PSSPG++++ CVTW P GT ++LS +G P L+ +GADR+ L+T G V L +IL F + V
Sbjct: 16 VHIIGQIVGASGFPQNSLFCKWGLQAGCA-WKLLSGLKDGQTQVDNPVIKDMAYWSHPIDIHYATKGLQGWPKLYIQVWHQDSFGRNELYGYGFCHIPSSPGTHEIQCVTWRPLGTWQEQLSQMFVGGGPQLKHSDLIYTGADRYRLQTVAMGKVHLQLSIILRNFDQYGV 185 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96846.17059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig96846.17059.1 >prot_H-elongata_contig96846.17059.1 ID=prot_H-elongata_contig96846.17059.1|Name=mRNA_H-elongata_contig96846.17059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp VHVIGEVTGALGFPKNRLYARYKLVYSAEHWHVMRGTVEAYTHLDETAGSback to top mRNA from alignment at H-elongata_contig96846:139..2333- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig96846.17059.1 ID=mRNA_H-elongata_contig96846.17059.1|Name=mRNA_H-elongata_contig96846.17059.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2195bp|location=Sequence derived from alignment at H-elongata_contig96846:139..2333- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig96846:139..2333- >mRNA_H-elongata_contig96846.17059.1 ID=mRNA_H-elongata_contig96846.17059.1|Name=mRNA_H-elongata_contig96846.17059.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig96846:139..2333- (Himanthalia elongata Himel1 dioecious)back to top |