mRNA_H-elongata_contig9639.17029.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9639.17029.1
Unique NamemRNA_H-elongata_contig9639.17029.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: D8LFI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI9_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 2.710e-168
Identity = 272/412 (66.02%), Postives = 310/412 (75.24%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGS-DPPKATRFSIRGPLSAAIV-----VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFD-EEGEVPVAADARGKHEGRAAAE---GKGHDWSGSDGWGSGEEYEMMDEGDSSD 1296
            MRIITADE GLVKV++LESGECLAVS GEQARA AVR++C ++     S   +S    F   IHVAR  G VETWD++Q+ER + ++  CAL    T ++C   P+ALAC+ P S   SE +R+LTCNG G+V +S AA  G S D  + T  SIRGP+SAA+         ALA+GGKENDLK WDL T +C WKAKNVPHDFLDMRQPVWI+SL  L     GG        +QQ+VAGTAHRQVRLYD RAQKRPTHS+DADEH +TTMAVAP G EVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHP+LPVLACVGLDRMARVY Y SREQKFQVYLKQRLNAVLFD EEGEV VAAD     + ++ A+   G G DWSGS+GWGSGEEYEM DE DSS+
Sbjct:    1 MRIITADETGLVKVVRLESGECLAVSAGEQARANAVRAVCFDHAAPAASRHRASDD--FFARIHVARAAGAVETWDVSQSER-DGQTGGCALSARGTAVECAAAPVALACLPPASSSSSESSRVLTCNGEGEVQVSRAAPDGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAAGGKENDLKTWDLGTGKCTWKAKNVPHDFLDMRQPVWITSLCPLAAATGGG------GGLQQMVAGTAHRQVRLYDARAQKRPTHSVDADEHGVTTMAVAPDGREVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPTLPVLACVGLDRMARVYGYHSREQKFQVYLKQRLNAVLFDGEEGEVQVAADGEDGEKKKSGAKDGAGAGEDWSGSEGWGSGEEYEM-DEADSSE 402          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A835ZDI3_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI3_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.660e-67
Identity = 164/431 (38.05%), Postives = 223/431 (51.74%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSP-GEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMD-CPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDF-LDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGG----EVVVADTAGLVRVLDLRKMKWGRRFEGPAG-SVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQ-----VYLKQRLNAVLFDEEGEV-PVAADARGKHEGRAAAEGKGHDWSGSDGWGSGEEYEM----MDEGDSSDEDENQQLSAEG 1329
            MR++TADE GLVKV Q+ES + L     G Q+R R VR LC    +   S   S         +HV R  GVVE W ++       K  A A    R+  + CP   ++L  +   +     P  ++ C+  G+V ++   +  G    + + F    P+  AI     LA+GG++ND+K+WD+ T QC W+AKNVP D  L +  PVW S+L  L        +  +  A+  ++AGTAHR +RLYDTRA +RP  +ID  EH IT + V  GGG      +V D AG +  LDLR ++  RR+  P G +VR  A HP+LPV A VGLDR+ RVY               +YLKQR + VLF +EG   P  A  R      AA EG      G DGWGS EEYEM     +EGD+    E  ++ +EG
Sbjct:    1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSR--------VHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAG----EGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPL-------RAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGRATPDGAIDRAA----AALEG------GDDGWGSAEEYEMGAGSSEEGDA----EESEMESEG 398          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A6G0XIB0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB0_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.220e-56
Identity = 129/359 (35.93%), Postives = 173/359 (48.19%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEGEVPV 1167
            MR+I  DE GLVK + LE+     +S   Q+RA + R L    ++  ++           G +    + G    W  T+                         P+ L  IS       E   I+ CN AG V + H      + P       I+  L         +A GGKE D+ LW+L TQQ I+KAKN+PHD LDMR PVW+ ++  L        S  DG     +  GTA+ Q+R+YDT+ ++RP       EH IT++ V      V+  DTAG V  LDLR  K   R+ GP GS+R +A HPSLP +A VGLDRM  V+H  +R+     Y KQRLNAVLF +EG  PV
Sbjct:    1 MRVIVGDETGLVKNISLEASSAQLLSGSSQSRATSARYLAWTDNDVVVAR--------MNGHVDCVDIHGGASPWSFTREG----------------------SPVGLGVIS-------EYGSIVRCNTAGRVEVVHPLHLKPNPPSFDVGHDIQ-TLRVDPFGSHVIAIGGKERDVNLWNLETQQAIFKAKNIPHDNLDMRVPVWVKAMAFL-------PSANDG---HHLAVGTAYHQIRIYDTKTKRRPVSEASFGEHPITSLVVHEN--RVIFGDTAGNVNALDLRTFKHLGRYHGPVGSIRDIALHPSLPYMAAVGLDRMVHVFHVDTRKAVHTYYAKQRLNAVLFTDEGVKPV 309          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A662X1L0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1L0_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.250e-55
Identity = 132/374 (35.29%), Postives = 200/374 (53.48%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGEQ--ARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALR----LTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVV---DRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
            MR++  DE GL+K ++LE  E   +S   Q  ARAR ++ +C     ++++         F  ++ VAR +GVVE+++ +       KS++ A      LT T  +  P+ + L  ++       +   ++ C+ AGDV +       G    K   F++   +    V     + +  GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW+   R L   G         S  Q+++ GT +R VR+YD+  ++RP   +D   EH I ++ V+P    V V DTAG + +LDLR  K   R  GP GS+R +A HP+LP +A VGLDRM  V+   SR+ +  +Y KQRLN+VLF  +G  ++P + D
Sbjct:    1 MRVLVGDETGLLKSIELEKSEQRVISSRAQPQARARGIQRMCWYADESSVAN--------FQRNVVVARADGVVESYEASHG-----KSLSAAREPDWSLT-TESEGNPKCVGLDVLA-------QFGSVVRCSDAGDVVVQSTLPDAG----KPASFNVGDNVERMRVEPTQQKVIGVGGKEHDLNLWSLETQQVLFKAKNVTHDKLDMRVPVWVKDFRFLSTPG--------NSNGQRVIVGTGYRHVRIYDSNTKRRPVQQLDNFGEHPINSLCVSPDETRVYVGDTAGNLDILDLRTFKHMGRCTGPVGSIRDIACHPTLPYVAAVGLDRMVHVFDVNSRKYRHTIYAKQRLNSVLFCTDGLKDLPQSED 341          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A0W8DWJ8_PHYNI (WD repeat-containing protein 74 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWJ8_PHYNI)

HSP 1 Score: 200 bits (508), Expect = 4.880e-55
Identity = 130/374 (34.76%), Postives = 195/374 (52.14%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGEQ--ARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPAR----ILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIV---VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
            MR++  DE GL+K ++LE  E   +S  EQ  AR+R ++ LC        +         +  ++ +AR +GVVE+++ +       KS++ A     +      E     C+      G +  R    ++ C   GDV +       G    K   F++ G L+   +       +  GGKE+DL LW L TQQ +++AKNV HD LDMR PVW+  LR L   G         S   +++ GT HR VR+YD+  ++RP   +D   E+ I ++ V+P    V V DTAG + +LDLR +K   R  GP GS+R +A HP+LP +A VGLDRM  V+   +R+ +  +Y KQRLN+VLF  +G  ++PVA D
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCWYADERDAAD--------YQRNVVLARADGVVESYEASHG-----KSLSAAKEPDWSWPASDKEQSKTRCV------GLDVIRKFGSVVQCTDTGDVVVRSTLEDAG----KPATFNVDGDLNMMRLEPATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFLSTPG--------NSNGHRVIVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRKYRHTIYAKQRLNSVLFCADGLKDIPVADD 343          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: K3WS22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS22_GLOUD)

HSP 1 Score: 196 bits (498), Expect = 1.470e-53
Identity = 125/360 (34.72%), Postives = 184/360 (51.11%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGE--QARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRA---LASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG 1155
            MR++  DE GL+K ++LE  E   VS  +  QAR   ++S+C  Y + T  TS          ++ VAR  G+VE +          KS A + R        P        I      GS    ++ C  AGDV + +      S+  K + FS+   +    +  +    +A GG E DL +W L  Q+C++KAKNV HD LDMR PVW+  LR L    + G          ++V GT ++ VR+YDT  ++RP   +   E+ I  + V+P    V +ADTAG + +LDLR +K   R  GP G++R +A HP+LP +A VGLDR   V+   +R+ +  VY KQRLN V+F ++G
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQHVVSSRKEPQARVHGIQSMCW-YEDETQDTSSKE-------NVVVARGNGIVENYSSAHG-----KSAATSSREANWQFTAPTG--KTTGIGMIQKFGS----VVRCTDAGDVFVKNML----SESAKPSTFSVGANIHRMRIEPKEQTHIAVGGNERDLNIWSLEKQECVFKAKNVTHDNLDMRVPVWVKDLRFLSQGSSNG---------HRVVVGTGYQHVRIYDTNTKRRPVQELKFGEYPINALCVSPDETRVYIADTAGNLDILDLRTLKHMGRCTGPVGAIRDIACHPTLPYIAAVGLDRFVHVFDVNTRKYQHNVYAKQRLNTVMFCDDG 328          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A225VZL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZL6_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.010e-53
Identity = 129/372 (34.68%), Postives = 191/372 (51.34%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGE--CLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPN--SPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAA---IVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
            MR++  DE GL+K ++LE  E   L+     Q RAR ++ LC        +         F  ++ +AR +GVVE+++ +  + +            +   D      A  C+  +     GS    ++ C+  GDV + +   + G    K   F++   L+           +  GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW+  LR L    +G  +G       ++V GT HR VR+YD+  ++RP   +D   E+ I ++ V+P    V V DTAG + +LDLR +K   R  GP GS+R +A HP+LP +A VGLDRM  V+   SR  +  +Y KQRLN VLF  +G  ++PV  D
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRVLSSRTQPQTRARGIQRLCWYADERDAAN--------FQRNVVIARADGVVESYEASHGKSLSASKEPDWSWSGQEKQD------ATRCVGLDVIQKFGS----VVQCSDTGDVVVRNTLEKAG----KPAAFNVGKDLNIMRLEAATQTVIGVGGKEHDLNLWSLETQQVLFKAKNVTHDKLDMRVPVWVKDLRFL---SSGNSNGH------RVVVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDINSRNYRHTIYAKQRLNTVLFCADGVKDIPVVDD 341          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A024TXS7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXS7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.660e-53
Identity = 124/366 (33.88%), Postives = 180/366 (49.18%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIV---VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAA 1173
            MR+I  DE GLVK + LE+     ++   Q R+++ R L  +  +  ++ +         G +    + G    W  T+                         P+ +  ++       E   I+ CN AG V + H         P    F++   +    V       +A GGKE D+ +WDL TQQ ++KAKNV HD LDMR PVW+ ++  L P  A G S     +  ++V GTA+ Q+R+YDT A++RP       EH IT++ V      V+  DTAG V  +D+R  K   R+ GP GS+R +A HP+LP +A VGLDRM  V+H  +R+     Y KQRLNAVLF +EG    P+AA
Sbjct:    1 MRVIVGDETGLVKNVALEAATATMLTGTAQGRSKSARYLAWSDKDVVVARTN--------GDVDCVGINGG-SPWSFTREG----------------------SPVGMGVVA-------EYGSIVRCNTAGRVEVVHPLHV----KPNPPAFNVGNDIHTLRVNPYASNVIAIGGKERDMNVWDLQTQQAVFKAKNVTHDNLDMRVPVWVKAITFLPPTSAAGGS----ESGHRLVVGTAYHQIRIYDTSAKRRPVLETSFGEHPITSLVVQDH--RVMFGDTAGNVNAIDMRTFKHLGRYHGPVGSIRDMALHPTLPYVASVGLDRMVHVHHIEARKAVHTYYAKQRLNAVLFTDEGVKAAPIAA 318          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A6A3JL54_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JL54_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.110e-52
Identity = 133/373 (35.66%), Postives = 198/373 (53.08%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGE--CLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEP-IALACISPN--SPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAA---IVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
            MR++  DE GL+K ++LE  E   L+     QAR+R ++ L           +   +   F  ++ +AR +GVVE++     E    KS++ A R      D P +      C+  +     GS    ++ C+ +GDV +       G    K   F++ G L+           +  GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW++ LR L   G   ++G       ++V GT HR VR+YDT  ++RP   +D   E+ I ++ V+P    V V DT G + +LDLR +K   R  GP GS+R ++ HP+LP +A VGLDRM  V+   +R+ +  +Y KQRLN+VLF  +G  ++PVA D
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRVLSSRTQPQARSRGIQRLSWY--------ADEREAANFQRNVVLARADGVVESY-----EAAHGKSLSAA-REPDWSWDAPDKTQTKTRCVGLDVIHKFGS----VVQCSDSGDVLVRSTLQDSG----KPASFNVGGDLNIMRLEAASQTVIGVGGKEHDLNLWSLETQQPLFKAKNVTHDKLDMRVPVWVNDLRFLSTPG--NNNGH------RVVVGTGHRHVRIYDTNTKRRPVQQLDNFGENPIQSICVSPDETRVYVGDTGGNLDILDLRTLKHMGRCTGPVGSIRDISCHPTLPYIAAVGLDRMVHVFDINTRKYRHTIYAKQRLNSVLFCADGLKDIPVADD 343          
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: F0W9J2_9STRA (Uncharacterized protein AlNc14C40G3451 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9J2_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.670e-52
Identity = 133/383 (34.73%), Postives = 185/383 (48.30%), Query Frame = 1
Query:   91 MRIITADEMGLVKVLQLESGECLAVSPG--EQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDV----NISHAASQGGSDPPKATRFSIRG--------------PLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEGEVPVAADA 1179
            MR++  DE GL+K + LE  E + +S G   Q R+  ++ +C  +HN      +   P   C S+ +AR  G +E +   Q+E + +                              P  S   +   C G   +    +I HA   G       +   +R               P   A  V +  A GGKE D ++W L TQQ I++AKNVP D L +R PVW+   R +     G  +G       +I+ GT + Q+RLYDT  Q+RP  SID  +H I  M + P    V VADT G + VLDLR +K   RF GP G++R L+ HP+LP LA VGLDRM +V+   SR  +  +Y KQRLNAVLF +EG V VA D+
Sbjct:    1 MRVLVGDETGLLKSIALEKKEQIILSAGTKSQCRSHGIQRMC--WHN------VDQTPTQSCHSVALARANGSIERF-AAQHELLSE----------------------------GIPQWSREIQSGNCVGLDVIEDKGSILHATDSGIVSEYNPSTEKLRNVIKLSERIECMRLEPRKDAQSVQKHFAVGGKEVDAQIWSLETQQLIFRAKNVPLDKLQLRVPVWV---RDVTFHSQGNSNGH------RIMVGTGYHQIRLYDTNTQRRPIQSIDLGDHPINAMCIDPNELYVYVADTTGCLDVLDLRTLKHLGRFLGPDGAIRSLSCHPTLPYLAAVGLDRMVQVFDINSRSCQHSIYAKQRLNAVLFCDEGIVQVAEDS 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI9_ECTSI2.710e-16866.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDI3_9STRA1.660e-6738.05Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A6G0XIB0_9STRA1.220e-5635.93Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A662X1L0_9STRA1.250e-5535.29Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0W8DWJ8_PHYNI4.880e-5534.76WD repeat-containing protein 74 n=10 Tax=Phytophth... [more]
K3WS22_GLOUD1.470e-5334.72Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A225VZL6_9STRA2.010e-5334.68Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A024TXS7_9STRA4.660e-5333.88Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6A3JL54_9STRA1.110e-5235.66Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
F0W9J2_9STRA1.670e-5234.73Uncharacterized protein AlNc14C40G3451 n=1 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9639contigH-elongata_contig9639:2037..3719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue5e-138
Seed eggNOG ortholog2880.D8LFI9
Preferred nameWDR74
KEGG koko:K14841
GOsGO:0001701,GO:0001824,GO:0001825,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0016070,GO:0019725,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042254,GO:0042273,GO:0042592,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046716,GO:0048646,GO:0048856,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsKOG3881@1,KOG3881@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-04_002020.1
Exons1
Model size1683
Cds size1497
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9639.17029.1prot_H-elongata_contig9639.17029.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9639 2127..3623 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931357.3595066-UTR-H-elongata_contig9639:2036..21261622931357.3595066-UTR-H-elongata_contig9639:2036..2126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9639 2037..2126 +
1691679803.7269387-UTR-H-elongata_contig9639:2036..21261691679803.7269387-UTR-H-elongata_contig9639:2036..2126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9639 2037..2126 +
1622931357.3885183-UTR-H-elongata_contig9639:3623..37191622931357.3885183-UTR-H-elongata_contig9639:3623..3719Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9639 3624..3719 +
1691679803.7483773-UTR-H-elongata_contig9639:3623..37191691679803.7483773-UTR-H-elongata_contig9639:3623..3719Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9639 3624..3719 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931357.3745663-CDS-H-elongata_contig9639:2126..36231622931357.3745663-CDS-H-elongata_contig9639:2126..3623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9639 2127..3623 +
1691679803.7380059-CDS-H-elongata_contig9639:2126..36231691679803.7380059-CDS-H-elongata_contig9639:2126..3623Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9639 2127..3623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9639.17029.1

>prot_H-elongata_contig9639.17029.1 ID=prot_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=499bp
MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLST
SISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMD
CPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKAT
RFSIRGPLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLD
MRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQK
RPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEG
PAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVL
FDEEGEVPVAADARGKHEGRAAAEGKGHDWSGSDGWGSGEEYEMMDEGDS
SDEDENQQLSAEGRAGMGAAINGSSFIGNMDGGNSVSSNEYGSRERQGTS
DEDSDVDGDDDESGDGEENGNETGDAHDLPLKRHQEKRKGGHSSKKRR*
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mRNA from alignment at H-elongata_contig9639:2037..3719+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9639.17029.1 ID=mRNA_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig9639:2037..3719+ (Himanthalia elongata Himel1 dioecious)
CGAGCTGATTATTTTGGAGAGGAGGGTTGTATAAAAGCTGCAGCTGGAGG AGAATACTTTTGAACTCTGAGGAAAAAAAATCTACGCACCATGCGTATCA TCACCGCTGATGAGATGGGACTGGTGAAGGTGCTGCAGCTGGAAAGTGGC GAATGCTTGGCCGTCAGCCCAGGGGAACAGGCAAGAGCACGCGCGGTGCG ATCCCTCTGTCACAATTATCATAATGCTACGCTGTCCACCTCCATTTCAA GTCAGCCTCGTACATTCTGTGGGAGTATCCACGTTGCGCGCTTGGAAGGA GTGGTTGAAACGTGGGATATGACCCAGAACGAGCGGATGGAAGACAAAAG TATCGCTTGCGCCCTAAGGCTCACTCGGACCGTGATGGACTGCCCGCCCG AGCCCATCGCGCTTGCGTGCATCTCACCAAACTCTCCTGGCGGCAGCGAA CCCGCTCGTATCTTGACTTGTAACGGAGCAGGAGATGTAAACATTTCCCA CGCAGCCTCCCAGGGCGGAAGCGACCCGCCCAAAGCGACAAGGTTCTCCA TTCGTGGACCGCTTAGCGCCGCAATCGTGGTCGACAGGGCCCTCGCCTCT GGAGGCAAAGAGAATGACCTGAAATTATGGGACTTAAACACTCAACAGTG CATCTGGAAGGCGAAGAACGTCCCTCACGACTTTTTGGACATGAGGCAAC CTGTGTGGATATCTTCACTCCGCTCGCTCGTGCCGGAGGGAGCAGGGGGT GATAGCGGCCGCGACGGGAGCGCGGTACAGCAAATCGTCGCGGGAACTGC GCACCGTCAGGTTCGCCTGTATGACACTCGTGCGCAGAAGCGACCAACGC ACTCCATCGACGCCGATGAGCATAGCATCACGACGATGGCCGTTGCCCCC GGCGGCGGGGAAGTGGTCGTGGCGGACACGGCTGGGCTCGTTCGCGTGCT CGATCTCCGAAAGATGAAGTGGGGGCGGAGGTTTGAGGGTCCTGCTGGCT CAGTCAGAGGTCTAGCGTTTCACCCGTCCCTGCCGGTGCTGGCCTGCGTC GGTCTGGACCGTATGGCGAGGGTCTACCATTACGGCTCGAGGGAACAGAA GTTCCAGGTGTATCTCAAGCAAAGGCTGAATGCTGTTTTATTTGACGAAG AGGGCGAGGTCCCTGTTGCCGCAGACGCTCGGGGCAAGCATGAGGGGAGA GCCGCTGCTGAAGGCAAGGGTCATGACTGGTCGGGGAGCGATGGCTGGGG CTCGGGCGAGGAGTACGAGATGATGGATGAAGGCGACAGCTCGGACGAGG ATGAGAACCAACAGCTTTCCGCTGAAGGCCGCGCCGGGATGGGAGCTGCG ATTAATGGGAGCAGTTTCATCGGCAACATGGATGGAGGCAATTCTGTGAG TAGTAATGAATACGGCAGCCGCGAGAGGCAGGGGACTTCGGACGAGGACA GTGATGTTGATGGGGATGATGACGAGAGCGGTGATGGCGAAGAGAACGGG AACGAAACGGGGGACGCTCACGACCTCCCCCTAAAACGGCACCAAGAAAA ACGGAAGGGCGGTCACTCGTCGAAAAAGAGGAGATAATAGCACTTTTAGT CAAATCGTGTGTGCAATCTTGGTTGGTTGAAGGATGAAGAAATGTATCTC GCGAACTAGTGCACGGGTTGTGATGACTAATTA
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Coding sequence (CDS) from alignment at H-elongata_contig9639:2037..3719+

>mRNA_H-elongata_contig9639.17029.1 ID=mRNA_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2994bp|location=Sequence derived from alignment at H-elongata_contig9639:2037..3719+ (Himanthalia elongata Himel1 dioecious)
ATGCGTATCATCACCGCTGATGAGATGGGACTGGTGAAGGTGCTGCAGCT
GGAAAGTGGCGAATGCTTGGCCGTCAGCCCAGGGGAACAGGCAAGAGCAC
GCGCGGTGCGATCCCTCTGTCACAATTATCATAATGCTACGCTGTCCACC
TCCATTTCAAGTCAGCCTCGTACATTCTGTGGGAGTATCCACGTTGCGCG
CTTGGAAGGAGTGGTTGAAACGTGGGATATGACCCAGAACGAGCGGATGG
AAGACAAAAGTATCGCTTGCGCCCTAAGGCTCACTCGGACCGTGATGGAC
TGCCCGCCCGAGCCCATCGCGCTTGCGTGCATCTCACCAAACTCTCCTGG
CGGCAGCGAACCCGCTCGTATCTTGACTTGTAACGGAGCAGGAGATGTAA
ACATTTCCCACGCAGCCTCCCAGGGCGGAAGCGACCCGCCCAAAGCGACA
AGGTTCTCCATTCGTGGACCGCTTAGCGCCGCAATCGTGGTCGACAGGGC
CCTCGCCTCTGGAGGCAAAGAGAATGACCTGAAATTATGGGACTTAAACA
CTCAACAGTGCATCTGGAAGGCGAAGAACGTCCCTCACGACTTTTTGGAC
ATGAGGCAACCTGTGTGGATATCTTCACTCCGCTCGCTCGTGCCGGAGGG
AGCAGGGGGTGATAGCGGCCGCGACGGGAGCGCGGTACAGCAAATCGTCG
CGGGAACTGCGCACCGTCAGGTTCGCCTGTATGACACTCGTGCGCAGAAG
CGACCAACGCACTCCATCGACGCCGATGAGCATAGCATCACGACGATGGC
CGTTGCCCCCGGCGGCGGGGAAGTGGTCGTGGCGGACACGGCTGGGCTCG
TTCGCGTGCTCGATCTCCGAAAGATGAAGTGGGGGCGGAGGTTTGAGGGT
CCTGCTGGCTCAGTCAGAGGTCTAGCGTTTCACCCGTCCCTGCCGGTGCT
GGCCTGCGTCGGTCTGGACCGTATGGCGAGGGTCTACCATTACGGCTCGA
GGGAACAGAAGTTCCAGGTGTATCTCAAGCAAAGGCTGAATGCTGTTTTA
TTTGACGAAGAGGGCGAGGTCCCTGTTGCCGCAGACGCTCGGGGCAAGCA
TGAGGGGAGAGCCGCTGCTGAAGGCAAGGGTCATGACTGGTCGGGGAGCG
ATGGCTGGGGCTCGGGCGAGGAGTACGAGATGATGGATGAAGGCGACAGC
TCGGACGAGGATGAGAACCAACAGCTTTCCGCTGAAGGCCGCGCCGGGAT
GGGAGCTGCGATTAATGGGAGCAGTTTCATCGGCAACATGGATGGAGGCA
ATTCTGTGAGTAGTAATGAATACGGCAGCCGCGAGAGGCAGGGGACTTCG
GACGAGGACAGTGATGTTGATGGGGATGATGACGAGAGCGGTGATGGCGA
AGAGAACGGGAACGAAACGGGGGACGCTCACGACCTCCCCCTAAAACGGC
ACCAAGAAAAACGGAAGGGCGGTCACTCGTCGAAAAAGAGGAGATAAATG
CGTATCATCACCGCTGATGAGATGGGACTGGTGAAGGTGCTGCAGCTGGA
AAGTGGCGAATGCTTGGCCGTCAGCCCAGGGGAACAGGCAAGAGCACGCG
CGGTGCGATCCCTCTGTCACAATTATCATAATGCTACGCTGTCCACCTCC
ATTTCAAGTCAGCCTCGTACATTCTGTGGGAGTATCCACGTTGCGCGCTT
GGAAGGAGTGGTTGAAACGTGGGATATGACCCAGAACGAGCGGATGGAAG
ACAAAAGTATCGCTTGCGCCCTAAGGCTCACTCGGACCGTGATGGACTGC
CCGCCCGAGCCCATCGCGCTTGCGTGCATCTCACCAAACTCTCCTGGCGG
CAGCGAACCCGCTCGTATCTTGACTTGTAACGGAGCAGGAGATGTAAACA
TTTCCCACGCAGCCTCCCAGGGCGGAAGCGACCCGCCCAAAGCGACAAGG
TTCTCCATTCGTGGACCGCTTAGCGCCGCAATCGTGGTCGACAGGGCCCT
CGCCTCTGGAGGCAAAGAGAATGACCTGAAATTATGGGACTTAAACACTC
AACAGTGCATCTGGAAGGCGAAGAACGTCCCTCACGACTTTTTGGACATG
AGGCAACCTGTGTGGATATCTTCACTCCGCTCGCTCGTGCCGGAGGGAGC
AGGGGGTGATAGCGGCCGCGACGGGAGCGCGGTACAGCAAATCGTCGCGG
GAACTGCGCACCGTCAGGTTCGCCTGTATGACACTCGTGCGCAGAAGCGA
CCAACGCACTCCATCGACGCCGATGAGCATAGCATCACGACGATGGCCGT
TGCCCCCGGCGGCGGGGAAGTGGTCGTGGCGGACACGGCTGGGCTCGTTC
GCGTGCTCGATCTCCGAAAGATGAAGTGGGGGCGGAGGTTTGAGGGTCCT
GCTGGCTCAGTCAGAGGTCTAGCGTTTCACCCGTCCCTGCCGGTGCTGGC
CTGCGTCGGTCTGGACCGTATGGCGAGGGTCTACCATTACGGCTCGAGGG
AACAGAAGTTCCAGGTGTATCTCAAGCAAAGGCTGAATGCTGTTTTATTT
GACGAAGAGGGCGAGGTCCCTGTTGCCGCAGACGCTCGGGGCAAGCATGA
GGGGAGAGCCGCTGCTGAAGGCAAGGGTCATGACTGGTCGGGGAGCGATG
GCTGGGGCTCGGGCGAGGAGTACGAGATGATGGATGAAGGCGACAGCTCG
GACGAGGATGAGAACCAACAGCTTTCCGCTGAAGGCCGCGCCGGGATGGG
AGCTGCGATTAATGGGAGCAGTTTCATCGGCAACATGGATGGAGGCAATT
CTGTGAGTAGTAATGAATACGGCAGCCGCGAGAGGCAGGGGACTTCGGAC
GAGGACAGTGATGTTGATGGGGATGATGACGAGAGCGGTGATGGCGAAGA
GAACGGGAACGAAACGGGGGACGCTCACGACCTCCCCCTAAAACGGCACC
AAGAAAAACGGAAGGGCGGTCACTCGTCGAAAAAGAGGAGATAA
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