mRNA_H-elongata_contig9639.17029.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: D8LFI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI9_ECTSI) HSP 1 Score: 496 bits (1276), Expect = 2.710e-168 Identity = 272/412 (66.02%), Postives = 310/412 (75.24%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGS-DPPKATRFSIRGPLSAAIV-----VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFD-EEGEVPVAADARGKHEGRAAAE---GKGHDWSGSDGWGSGEEYEMMDEGDSSD 1296
MRIITADE GLVKV++LESGECLAVS GEQARA AVR++C ++ S +S F IHVAR G VETWD++Q+ER + ++ CAL T ++C P+ALAC+ P S SE +R+LTCNG G+V +S AA G S D + T SIRGP+SAA+ ALA+GGKENDLK WDL T +C WKAKNVPHDFLDMRQPVWI+SL L GG +QQ+VAGTAHRQVRLYD RAQKRPTHS+DADEH +TTMAVAP G EVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHP+LPVLACVGLDRMARVY Y SREQKFQVYLKQRLNAVLFD EEGEV VAAD + ++ A+ G G DWSGS+GWGSGEEYEM DE DSS+
Sbjct: 1 MRIITADETGLVKVVRLESGECLAVSAGEQARANAVRAVCFDHAAPAASRHRASDD--FFARIHVARAAGAVETWDVSQSER-DGQTGGCALSARGTAVECAAAPVALACLPPASSSSSESSRVLTCNGEGEVQVSRAAPDGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAAGGKENDLKTWDLGTGKCTWKAKNVPHDFLDMRQPVWITSLCPLAAATGGG------GGLQQMVAGTAHRQVRLYDARAQKRPTHSVDADEHGVTTMAVAPDGREVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPTLPVLACVGLDRMARVYGYHSREQKFQVYLKQRLNAVLFDGEEGEVQVAADGEDGEKKKSGAKDGAGAGEDWSGSEGWGSGEEYEM-DEADSSE 402
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A835ZDI3_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI3_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.660e-67 Identity = 164/431 (38.05%), Postives = 223/431 (51.74%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSP-GEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMD-CPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDF-LDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGG----EVVVADTAGLVRVLDLRKMKWGRRFEGPAG-SVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQ-----VYLKQRLNAVLFDEEGEV-PVAADARGKHEGRAAAEGKGHDWSGSDGWGSGEEYEM----MDEGDSSDEDENQQLSAEG 1329
MR++TADE GLVKV Q+ES + L G Q+R R VR LC + S S +HV R GVVE W ++ K A A R+ + CP ++L + + P ++ C+ G+V ++ + G + + F P+ AI LA+GG++ND+K+WD+ T QC W+AKNVP D L + PVW S+L L + + A+ ++AGTAHR +RLYDTRA +RP +ID EH IT + V GGG +V D AG + LDLR ++ RR+ P G +VR A HP+LPV A VGLDR+ RVY +YLKQR + VLF +EG P A R AA EG G DGWGS EEYEM +EGD+ E ++ +EG
Sbjct: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSR--------VHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAG----EGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPL-------RAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGRATPDGAIDRAA----AALEG------GDDGWGSAEEYEMGAGSSEEGDA----EESEMESEG 398
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A6G0XIB0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB0_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.220e-56 Identity = 129/359 (35.93%), Postives = 173/359 (48.19%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEGEVPV 1167
MR+I DE GLVK + LE+ +S Q+RA + R L ++ ++ G + + G W T+ P+ L IS E I+ CN AG V + H + P I+ L +A GGKE D+ LW+L TQQ I+KAKN+PHD LDMR PVW+ ++ L S DG + GTA+ Q+R+YDT+ ++RP EH IT++ V V+ DTAG V LDLR K R+ GP GS+R +A HPSLP +A VGLDRM V+H +R+ Y KQRLNAVLF +EG PV
Sbjct: 1 MRVIVGDETGLVKNISLEASSAQLLSGSSQSRATSARYLAWTDNDVVVAR--------MNGHVDCVDIHGGASPWSFTREG----------------------SPVGLGVIS-------EYGSIVRCNTAGRVEVVHPLHLKPNPPSFDVGHDIQ-TLRVDPFGSHVIAIGGKERDVNLWNLETQQAIFKAKNIPHDNLDMRVPVWVKAMAFL-------PSANDG---HHLAVGTAYHQIRIYDTKTKRRPVSEASFGEHPITSLVVHEN--RVIFGDTAGNVNALDLRTFKHLGRYHGPVGSIRDIALHPSLPYMAAVGLDRMVHVFHVDTRKAVHTYYAKQRLNAVLFTDEGVKPV 309
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A662X1L0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1L0_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.250e-55 Identity = 132/374 (35.29%), Postives = 200/374 (53.48%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGEQ--ARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALR----LTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVV---DRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
MR++ DE GL+K ++LE E +S Q ARAR ++ +C ++++ F ++ VAR +GVVE+++ + KS++ A LT T + P+ + L ++ + ++ C+ AGDV + G K F++ + V + + GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW+ R L G S Q+++ GT +R VR+YD+ ++RP +D EH I ++ V+P V V DTAG + +LDLR K R GP GS+R +A HP+LP +A VGLDRM V+ SR+ + +Y KQRLN+VLF +G ++P + D
Sbjct: 1 MRVLVGDETGLLKSIELEKSEQRVISSRAQPQARARGIQRMCWYADESSVAN--------FQRNVVVARADGVVESYEASHG-----KSLSAAREPDWSLT-TESEGNPKCVGLDVLA-------QFGSVVRCSDAGDVVVQSTLPDAG----KPASFNVGDNVERMRVEPTQQKVIGVGGKEHDLNLWSLETQQVLFKAKNVTHDKLDMRVPVWVKDFRFLSTPG--------NSNGQRVIVGTGYRHVRIYDSNTKRRPVQQLDNFGEHPINSLCVSPDETRVYVGDTAGNLDILDLRTFKHMGRCTGPVGSIRDIACHPTLPYVAAVGLDRMVHVFDVNSRKYRHTIYAKQRLNSVLFCTDGLKDLPQSED 341
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A0W8DWJ8_PHYNI (WD repeat-containing protein 74 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWJ8_PHYNI) HSP 1 Score: 200 bits (508), Expect = 4.880e-55 Identity = 130/374 (34.76%), Postives = 195/374 (52.14%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGEQ--ARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPAR----ILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIV---VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
MR++ DE GL+K ++LE E +S EQ AR+R ++ LC + + ++ +AR +GVVE+++ + KS++ A + E C+ G + R ++ C GDV + G K F++ G L+ + + GGKE+DL LW L TQQ +++AKNV HD LDMR PVW+ LR L G S +++ GT HR VR+YD+ ++RP +D E+ I ++ V+P V V DTAG + +LDLR +K R GP GS+R +A HP+LP +A VGLDRM V+ +R+ + +Y KQRLN+VLF +G ++PVA D
Sbjct: 1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCWYADERDAAD--------YQRNVVLARADGVVESYEASHG-----KSLSAAKEPDWSWPASDKEQSKTRCV------GLDVIRKFGSVVQCTDTGDVVVRSTLEDAG----KPATFNVDGDLNMMRLEPATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFLSTPG--------NSNGHRVIVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDVNTRKYRHTIYAKQRLNSVLFCADGLKDIPVADD 343
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: K3WS22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS22_GLOUD) HSP 1 Score: 196 bits (498), Expect = 1.470e-53 Identity = 125/360 (34.72%), Postives = 184/360 (51.11%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGE--QARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIVVDRA---LASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG 1155
MR++ DE GL+K ++LE E VS + QAR ++S+C Y + T TS ++ VAR G+VE + KS A + R P I GS ++ C AGDV + + S+ K + FS+ + + + +A GG E DL +W L Q+C++KAKNV HD LDMR PVW+ LR L + G ++V GT ++ VR+YDT ++RP + E+ I + V+P V +ADTAG + +LDLR +K R GP G++R +A HP+LP +A VGLDR V+ +R+ + VY KQRLN V+F ++G
Sbjct: 1 MRVLVGDETGLLKSIELEKNEQHVVSSRKEPQARVHGIQSMCW-YEDETQDTSSKE-------NVVVARGNGIVENYSSAHG-----KSAATSSREANWQFTAPTG--KTTGIGMIQKFGS----VVRCTDAGDVFVKNML----SESAKPSTFSVGANIHRMRIEPKEQTHIAVGGNERDLNIWSLEKQECVFKAKNVTHDNLDMRVPVWVKDLRFLSQGSSNG---------HRVVVGTGYQHVRIYDTNTKRRPVQELKFGEYPINALCVSPDETRVYIADTAGNLDILDLRTLKHMGRCTGPVGAIRDIACHPTLPYIAAVGLDRFVHVFDVNTRKYQHNVYAKQRLNTVMFCDDG 328
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A225VZL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZL6_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.010e-53 Identity = 129/372 (34.68%), Postives = 191/372 (51.34%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGE--CLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPN--SPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAA---IVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
MR++ DE GL+K ++LE E L+ Q RAR ++ LC + F ++ +AR +GVVE+++ + + + + D A C+ + GS ++ C+ GDV + + + G K F++ L+ + GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW+ LR L +G +G ++V GT HR VR+YD+ ++RP +D E+ I ++ V+P V V DTAG + +LDLR +K R GP GS+R +A HP+LP +A VGLDRM V+ SR + +Y KQRLN VLF +G ++PV D
Sbjct: 1 MRVLVGDETGLLKSIELEKNEQRVLSSRTQPQTRARGIQRLCWYADERDAAN--------FQRNVVIARADGVVESYEASHGKSLSASKEPDWSWSGQEKQD------ATRCVGLDVIQKFGS----VVQCSDTGDVVVRNTLEKAG----KPAAFNVGKDLNIMRLEAATQTVIGVGGKEHDLNLWSLETQQVLFKAKNVTHDKLDMRVPVWVKDLRFL---SSGNSNGH------RVVVGTGHRHVRIYDSNTKRRPVQQLDNFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACHPTLPYIAAVGLDRMVHVFDINSRNYRHTIYAKQRLNTVLFCADGVKDIPVVDD 341
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A024TXS7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXS7_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.660e-53 Identity = 124/366 (33.88%), Postives = 180/366 (49.18%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAAIV---VDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAA 1173
MR+I DE GLVK + LE+ ++ Q R+++ R L + + ++ + G + + G W T+ P+ + ++ E I+ CN AG V + H P F++ + V +A GGKE D+ +WDL TQQ ++KAKNV HD LDMR PVW+ ++ L P A G S + ++V GTA+ Q+R+YDT A++RP EH IT++ V V+ DTAG V +D+R K R+ GP GS+R +A HP+LP +A VGLDRM V+H +R+ Y KQRLNAVLF +EG P+AA
Sbjct: 1 MRVIVGDETGLVKNVALEAATATMLTGTAQGRSKSARYLAWSDKDVVVARTN--------GDVDCVGINGG-SPWSFTREG----------------------SPVGMGVVA-------EYGSIVRCNTAGRVEVVHPLHV----KPNPPAFNVGNDIHTLRVNPYASNVIAIGGKERDMNVWDLQTQQAVFKAKNVTHDNLDMRVPVWVKAITFLPPTSAAGGS----ESGHRLVVGTAYHQIRIYDTSAKRRPVLETSFGEHPITSLVVQDH--RVMFGDTAGNVNAIDMRTFKHLGRYHGPVGSIRDMALHPTLPYVASVGLDRMVHVHHIEARKAVHTYYAKQRLNAVLFTDEGVKAAPIAA 318
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: A0A6A3JL54_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JL54_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.110e-52 Identity = 133/373 (35.66%), Postives = 198/373 (53.08%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGE--CLAVSPGEQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEP-IALACISPN--SPGGSEPARILTCNGAGDVNISHAASQGGSDPPKATRFSIRGPLSAA---IVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDA-DEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEG--EVPVAAD 1176
MR++ DE GL+K ++LE E L+ QAR+R ++ L + + F ++ +AR +GVVE++ E KS++ A R D P + C+ + GS ++ C+ +GDV + G K F++ G L+ + GGKE+DL LW L TQQ ++KAKNV HD LDMR PVW++ LR L G ++G ++V GT HR VR+YDT ++RP +D E+ I ++ V+P V V DT G + +LDLR +K R GP GS+R ++ HP+LP +A VGLDRM V+ +R+ + +Y KQRLN+VLF +G ++PVA D
Sbjct: 1 MRVLVGDETGLLKSIELEKNEQRVLSSRTQPQARSRGIQRLSWY--------ADEREAANFQRNVVLARADGVVESY-----EAAHGKSLSAA-REPDWSWDAPDKTQTKTRCVGLDVIHKFGS----VVQCSDSGDVLVRSTLQDSG----KPASFNVGGDLNIMRLEAASQTVIGVGGKEHDLNLWSLETQQPLFKAKNVTHDKLDMRVPVWVNDLRFLSTPG--NNNGH------RVVVGTGHRHVRIYDTNTKRRPVQQLDNFGENPIQSICVSPDETRVYVGDTGGNLDILDLRTLKHMGRCTGPVGSIRDISCHPTLPYIAAVGLDRMVHVFDINTRKYRHTIYAKQRLNSVLFCADGLKDIPVADD 343
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Match: F0W9J2_9STRA (Uncharacterized protein AlNc14C40G3451 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9J2_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.670e-52 Identity = 133/383 (34.73%), Postives = 185/383 (48.30%), Query Frame = 1
Query: 91 MRIITADEMGLVKVLQLESGECLAVSPG--EQARARAVRSLCHNYHNATLSTSISSQPRTFCGSIHVARLEGVVETWDMTQNERMEDKSIACALRLTRTVMDCPPEPIALACISPNSPGGSEPARILTCNGAGDV----NISHAASQGGSDPPKATRFSIRG--------------PLSAAIVVDRALASGGKENDLKLWDLNTQQCIWKAKNVPHDFLDMRQPVWISSLRSLVPEGAGGDSGRDGSAVQQIVAGTAHRQVRLYDTRAQKRPTHSIDADEHSITTMAVAPGGGEVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPSLPVLACVGLDRMARVYHYGSREQKFQVYLKQRLNAVLFDEEGEVPVAADA 1179
MR++ DE GL+K + LE E + +S G Q R+ ++ +C +HN + P C S+ +AR G +E + Q+E + + P S + C G + +I HA G + +R P A V + A GGKE D ++W L TQQ I++AKNVP D L +R PVW+ R + G +G +I+ GT + Q+RLYDT Q+RP SID +H I M + P V VADT G + VLDLR +K RF GP G++R L+ HP+LP LA VGLDRM +V+ SR + +Y KQRLNAVLF +EG V VA D+
Sbjct: 1 MRVLVGDETGLLKSIALEKKEQIILSAGTKSQCRSHGIQRMC--WHN------VDQTPTQSCHSVALARANGSIERF-AAQHELLSE----------------------------GIPQWSREIQSGNCVGLDVIEDKGSILHATDSGIVSEYNPSTEKLRNVIKLSERIECMRLEPRKDAQSVQKHFAVGGKEVDAQIWSLETQQLIFRAKNVPLDKLQLRVPVWV---RDVTFHSQGNSNGH------RIMVGTGYHQIRLYDTNTQRRPIQSIDLGDHPINAMCIDPNELYVYVADTTGCLDVLDLRTLKHLGRFLGPDGAIRSLSCHPTLPYLAAVGLDRMVQVFDINSRSCQHSIYAKQRLNAVLFCDEGIVQVAEDS 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9639.17029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9639.17029.1 >prot_H-elongata_contig9639.17029.1 ID=prot_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=499bp MRIITADEMGLVKVLQLESGECLAVSPGEQARARAVRSLCHNYHNATLSTback to top mRNA from alignment at H-elongata_contig9639:2037..3719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9639.17029.1 ID=mRNA_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig9639:2037..3719+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9639:2037..3719+ >mRNA_H-elongata_contig9639.17029.1 ID=mRNA_H-elongata_contig9639.17029.1|Name=mRNA_H-elongata_contig9639.17029.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2994bp|location=Sequence derived from alignment at H-elongata_contig9639:2037..3719+ (Himanthalia elongata Himel1 dioecious)back to top |