mRNA_H-elongata_contig94288.16854.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: D8LKX8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX8_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.100e-84 Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNEDDSHKLTDDEYQQFLDTDYITNQVLAGFY 450
DRGQFSCEVILHLFALKLR+P V LIRGNHECSSVSAHFGFKDECK KYGLTVYYRFLLAFQTMPICALI T GRIFACHGGISPD++ LSDIE IDRFAEPEM+GPLCDMLWADP+NEDDSHKLT +EYQ FLDTDYI+NQV Y
Sbjct: 267 DRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKMKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIRHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDDSHKLTGEEYQHFLDTDYISNQVRGCSY 416
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A6H5L564_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L564_9PHAE) HSP 1 Score: 272 bits (695), Expect = 4.010e-82 Identity = 127/150 (84.67%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNEDDSHKLTDDEYQQFLDTDYITNQVLAGFY 450
DRGQFSCEVILHLFALKLR+P V LIRGNHECSSVSAHFGFKDECK KYGLTVYYRFLLAFQTMPICALI T GRIFACHGGISPD++ LSDIE IDRFAEPEM+GPLCDMLWADP+NEDDSHKLT +EYQ FLDT+YI+NQV Y
Sbjct: 306 DRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKVKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIQHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDDSHKLTGEEYQHFLDTNYISNQVRGCSY 455
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A836CLD0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD0_9STRA) HSP 1 Score: 211 bits (537), Expect = 5.820e-66 Identity = 94/134 (70.15%), Postives = 115/134 (85.82%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNEDDSHKLTDDEYQQ 402
DRG FSCEV+L L ALKLR+P V L+RGNHECS+VSAHFGFK+ECK KYGLTVYY+FL FQ +PI ALI TK GRIFA HGGISPD+K+L ++ IDRFAEP+M+G LCD+LW+DP+NED+++KLTD EY++
Sbjct: 47 DRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKE 180
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A812W8V9_SYMMI (Serine/threonine-protein phosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W8V9_SYMMI) HSP 1 Score: 177 bits (450), Expect = 9.880e-54 Identity = 78/122 (63.93%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNED 366
DRG FSCEVIL L A K+ YP+++ LIRGNHEC+SVS HFGFK+ECK KYG+ VYYRFLL FQT+P+ A++ST G +FACHGG+SP+ + DIE IDRF EPE + L D+LW+DP++ED
Sbjct: 65 DRGSFSCEVILTLLAYKVTYPDRIWLIRGNHECASVSGHFGFKEECKMKYGMQVYYRFLLLFQTLPLAAVVSTAYGDLFACHGGLSPNAVHIEDIERIDRFVEPEENQTLLDILWSDPISED 186
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A7S3H896_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H896_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.920e-53 Identity = 75/128 (58.59%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNEDDSHKLT 384
DRGQ+SCEV+L+L ALK+ YP K+ L+RGNHEC+SVS HFGFK+ECK KYG+ +YY FLL FQTMP+ A+IST G I+ACHGG+SP ++++ IE++DR EPE + L D+LWADP+++++ +T
Sbjct: 36 DRGQYSCEVMLYLLALKVAYPEKIWLVRGNHECASVSGHFGFKEECKVKYGMNIYYSFLLMFQTMPLGAIISTAFGDIYACHGGLSPGLETIETIESLDRMIEPESNPNLMDILWADPISDENVENMT 163
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A6H5L3W8_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W8_9PHAE) HSP 1 Score: 184 bits (467), Expect = 5.270e-51 Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNED---DSHKLTDDEYQQFLDTDYITNQV 435
DRG+FSCEV+L+L ALK+ +P KVHLIRGNHEC S++ HFGFKDECK+KYGL VYYRFL F+ MP+CA+I+ GR F HGGISPD+ SL I +DR AEPEM+G LCD+LWADP ++ + L+D E L++ + N++
Sbjct: 140 DRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALDRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRL 287
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: D7FVC2_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC2_ECTSI) HSP 1 Score: 182 bits (462), Expect = 2.470e-50 Identity = 84/148 (56.76%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNED---DSHKLTDDEYQQFLDTDYITNQV 435
DRG+FSCEV+L+L ALK+ +P KVHLIRGNHEC S++ HFGFKDECK+KYGL VYYRFL F+ MP+CA+I+ GR F HGGISPD+ SL I ++R AEPEM+G LCD+LWADP ++ + L+D E L++ + N++
Sbjct: 243 DRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALNRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRL 390
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A4D9CPK7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPK7_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.640e-49 Identity = 74/121 (61.16%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNE 363
DRG +SCEV+L+L ALK+ YP+ +HL+RGNHE + +FGFK+ECKAKYGL VYYRFLL F+++P+CA++ T GR+FACHGGISP++++L++I+ IDRF EP G LCD+LWADP +E
Sbjct: 374 DRGAYSCEVLLYLLALKVAYPDLIHLLRGNHETRGATTYFGFKEECKAKYGLPVYYRFLLVFESLPLCAVVETDYGRLFACHGGISPEIQTLAEIQRIDRFVEPGASGSLCDLLWADPWHE 494
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: A0A835Z1Z6_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z6_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.970e-49 Identity = 70/121 (57.85%), Postives = 94/121 (77.69%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNE 363
DRG +SCEV+L+L +LKL YP VHL+RGNHEC S++ HFGFK ECKAKYGL VYYRFL F+ +P+CA++++ GR HGG+SPD+ S+ +++ + R EP M GPLCD+LWADP ++
Sbjct: 63 DRGAYSCEVMLYLLSLKLAYPKHVHLLRGNHECRSLTGHFGFKAECKAKYGLPVYYRFLRLFEELPLCAVVTSDVGRYLCAHGGLSPDLASIEEVDALQRRGEPPMSGPLCDLLWADPADD 183
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Match: K3WLL0_GLOUD (Serine/threonine-protein phosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLL0_GLOUD) HSP 1 Score: 167 bits (424), Expect = 5.150e-49 Identity = 72/136 (52.94%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 1 DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYGLTVYYRFLLAFQTMPICALISTKKGRIFACHGGISPDVKSLSDIENIDRFAEPEMDGPLCDMLWADPMNEDDSHKLTDDEYQQFL 408
DRG FS EVIL+L LK+++P KV L+RGNHEC ++S+ +GF++EC+ KYG++VYY FL FQ++PI AL+ T +G IF HGGISPD+ S+ I++IDR E DGPLCD+LWADP + + +++DD+ +++L
Sbjct: 9 DRGAFSSEVILYLLLLKVKFPKKVFLLRGNHECETISSFYGFRNECRLKYGISVYYHFLSCFQSLPIAALLKTPRGDIFCVHGGISPDLSSIYAIDSIDRRRELPTDGPLCDLLWADPAVDAEGERISDDKAEEYL 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94288.16854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94288.16854.1 >prot_H-elongata_contig94288.16854.1 ID=prot_H-elongata_contig94288.16854.1|Name=mRNA_H-elongata_contig94288.16854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp DRGQFSCEVILHLFALKLRYPNKVHLIRGNHECSSVSAHFGFKDECKAKYback to top mRNA from alignment at H-elongata_contig94288:286..2029+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94288.16854.1 ID=mRNA_H-elongata_contig94288.16854.1|Name=mRNA_H-elongata_contig94288.16854.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1744bp|location=Sequence derived from alignment at H-elongata_contig94288:286..2029+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94288:286..2029+ >mRNA_H-elongata_contig94288.16854.1 ID=mRNA_H-elongata_contig94288.16854.1|Name=mRNA_H-elongata_contig94288.16854.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig94288:286..2029+ (Himanthalia elongata Himel1 dioecious)back to top |