mRNA_H-elongata_contig86727.16233.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: D8LNL4_ECTSI (Mitogen-activated protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNL4_ECTSI) HSP 1 Score: 124 bits (310), Expect = 3.110e-31 Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
+DG LTK+G WKRRWFILE HVITYFSKQGDL+P+GRMVL A+S+VT LPTRVHAFQV K L+ YADT EER+ W
Sbjct: 18 LDGHLTKKGGVQWKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERESW 97
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: A0A835Z2Y5_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y5_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.420e-28 Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
++GFLTK+G WK+RWF LE HV+TY+S+QGD +P+GRMVL A+S+VT LPTR HAFQV K L+ +ADT EE+D W
Sbjct: 11 LEGFLTKKGGVSWKKRWFTLEDHVVTYYSRQGDPKPRGRMVLNAESRVTNLPTRPHAFQVITNSKALMVFADTPEEKDHW 90
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: A0A6V1P443_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P443_HETAK) HSP 1 Score: 108 bits (270), Expect = 6.150e-26 Identity = 47/80 (58.75%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
++GFLTK+G WK+R+F+++ H ITYFSKQGD +P+GRMVL +DS+VT LP+R +AFQV K L+ +ADT EERD+W
Sbjct: 12 LEGFLTKKGGVSWKKRYFMMKDHTITYFSKQGDAKPRGRMVLNSDSRVTNLPSRPNAFQVITNNKALMVFADTFEERDQW 91
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: W7U818_9STRA (Mitogen-activated protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U818_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.080e-11 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
++G+L K+GR WKRR+F L H+ITY++K+GD + + +M LTA S + ++ + F + A K A+T +++ W
Sbjct: 30 VEGWLNKKGRMTWKRRYFTLHGHIITYYAKKGDAKCRNQMALTAQSVFSSSSSKKNGFSIVTAGKGFQLNAETPQDKHAW 109
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-11 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
++G+L K+GR WKRR+F L H+ITY++K+GD + + +M LTA S + ++ + F + A K A+T +++ W
Sbjct: 30 VEGWLNKKGRMTWKRRYFTLHGHIITYYAKKGDAKCRNQMALTAQSVFSSSSSKKNGFSIVTAGKGFQLNAETPQDKHAW 109
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: A0A7S1U7I6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7I6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 9.420e-11 Identity = 28/80 (35.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 1 MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPTRVHAFQVTAAEKKLIAYADTSEERDRW 240
++G LTK+ A WKRR+F+L I YF++Q + + +G++ L A+++V + FQV + L+ +AD + E++RW
Sbjct: 16 LEGHLTKKSGAQWKRRFFVLTNDCIKYFTRQEETRVRGQLELNANTKVIDYRLKDFGFQVISNNTALMVHADDAREKERW 95
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Match: A2FHJ2_TRIVA (Non-specific serine/threonine protein kinase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FHJ2_TRIVA) HSP 1 Score: 52.0 bits (123), Expect = 7.220e-6 Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 7 GFLTKRGRA--HWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKLPT--RVHAFQVTAAEKKLIAYADTSEERDRW 240
G+ TK+G WK+RWF+LEK + YF+K+G + QGR+ + + V+ P + AF++ +E+ DT +E W
Sbjct: 5 GWGTKQGGLIKTWKKRWFVLEKDALVYFTKEGG-EEQGRIPIGSTCVVSPAPDCKKQPAFKIVTSERTYFIVTDTQKECSDW 85 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86727.16233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86727.16233.1 >prot_H-elongata_contig86727.16233.1 ID=prot_H-elongata_contig86727.16233.1|Name=mRNA_H-elongata_contig86727.16233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp MDGFLTKRGRAHWKRRWFILEKHVITYFSKQGDLQPQGRMVLTADSQVTKback to top mRNA from alignment at H-elongata_contig86727:1582..1821+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86727.16233.1 ID=mRNA_H-elongata_contig86727.16233.1|Name=mRNA_H-elongata_contig86727.16233.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=240bp|location=Sequence derived from alignment at H-elongata_contig86727:1582..1821+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86727:1582..1821+ >mRNA_H-elongata_contig86727.16233.1 ID=mRNA_H-elongata_contig86727.16233.1|Name=mRNA_H-elongata_contig86727.16233.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig86727:1582..1821+ (Himanthalia elongata Himel1 dioecious)back to top |