mRNA_H-elongata_contig829.15927.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig829.15927.1
Unique NamemRNA_H-elongata_contig829.15927.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: D8LCR9_ECTSI (NF-X1 finger and helicase domain protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR9_ECTSI)

HSP 1 Score: 733 bits (1892), Expect = 7.640e-232
Identity = 424/728 (58.24%), Postives = 497/728 (68.27%), Query Frame = 1 
Query:    1 AEGLWGRVLDESLKLAKRGSLRDTSYTMYDRRRDLRGHSVWEPLTWADVTLPIARFMVEVTKRFRDAVLVDKDFQRGATDTLPALVAQWKAHKGNLQTISPSRVQELEVDDAMANLKSLPFRYCQILRTSEEARTARDAHKNASASRSDLFNLSESQAQAQGRHAGQGYDGPGRFSRLGVRRHDNDRERIMDISVPPTAGEIVCERAPFVPRDAPSTWSNMEHLKPLDAGSSAAIMDVHFRLLRQDFIEPLREAVLGYRREQKNK------GSRGGGRGGVFKAKTEGGRSFMSLFVFKNVQVVGITGSSRNGVCVSLEFDKPEAVRRLSEAKQKDYWERTGRLAVANMVVICEDTDANAGTSDSVENEQTGAGDVLLVFAVISERDVQKLWKGGQRGTIGVSFDSCAETVAGLKQMLDRGGLTSSGRLLMLQPSNSYFAYRPILQVLKSAAREAIPFSDILLPP----AEGATVDPSVAVRPPSYDLSDIANRANDFDVTVASALSSVNMRDPASFPIAQLLKKTTLDKAQLTALLAALSREVTLIQGPPGTGKTFVGAKVVRLLLTNRSLLKHWEGPIMCVCLTNHALDQFLGDLIDAGVEGIWGVDVATEVPDLAQA----VDVVERLIEGHASQDIEDAIKGRDKRKE-DDDGFQQARVGRSVCGVKDWLRGKAALYRPRRRTSNTRGRRYVDPLSPGDAVKVNVVDKNRERKRLDQLRALGRR 2139
            A+GLW RV DE  KL  RGS+RD SYT + R RD +   VWEP+TW DV LPIARFMVEVTKRFRDAVL+D  FQ+ AT+TLP L+A WK   G      PSR Q LEVDDAMANL  +     QILR SE AR  R+  K    +RS+LFNLS+SQ Q +G      YDGPG FSRL V+RHDND ERI +ISV PTAGEI+CER P+VPR+APSTW  M HLKPL   S A ++D HFRLLRQDF+EPLREAVLGYRREQ         G  GGGRGGVFKA+TEGGRSF++LFVFKNV+V GI+G++  GV VSLEFDKP+AV  +S+ KQ+D+WE++GRLAVANMVVICE   A+   +D   NE   +   LLVFAVISERDV+KL     R  IGVSFD+ A TVA L+ +LD GG TS GRLLMLQPSNSYFAYRPILQVLKS ARE +PF+D LLPP    A GAT   ++  +PPS      A  + D       AL SV+M D   FP+ +LL+ TTLD+AQL AL AALS EV LIQGPPGTGKT+VGAKVVRLLLTNR +L HW GPIMCVCLTNHALDQFL DL+DAGV+GIW  +V     +   A     + + RL+  HA    E+AI    K    D+DG+Q   VG+   G+KDWL GK         T++    R +   S  DA    VV   +E KR DQ RAL RR
Sbjct:  148 ADGLWPRVFDELSKLTTRGSVRDLSYTAFHRDRDKQISGVWEPVTWVDVVLPIARFMVEVTKRFRDAVLLDTAFQKAATETLPKLIAAWKTAGGRGGDPPPSRTQLLEVDDAMANLDRVMGATLQILRASEVARAERENEKLGRNARSELFNLSDSQGQTEGAT----YDGPGVFSRLQVKRHDNDAERISEISVAPTAGEILCERPPYVPRNAPSTWDGMNHLKPLAPDSPAPVLDTHFRLLRQDFVEPLREAVLGYRREQLKAQDNRVGGGVGGGRGGVFKAQTEGGRSFLNLFVFKNVRVAGISGTTYGGVNVSLEFDKPDAVMNMSQTKQRDHWEKSGRLAVANMVVICE---AHVTAADDTANEGDSSPP-LLVFAVISERDVRKLSGPSPRAEIGVSFDTSAGTVAALESLLDLGGRTSDGRLLMLQPSNSYFAYRPILQVLKSPAREVLPFADTLLPPSAAAAAGATAREAIEPKPPSPTRGGNAEASLD-------ALRSVSMLDRERFPMTELLEHTTLDQAQLEALCAALSHEVALIQGPPGTGKTYVGAKVVRLLLTNRRMLGHWTGPIMCVCLTNHALDQFLCDLLDAGVDGIWAGEVTAITANFRDANRSNTEALHRLLVNHAPLVFEEAIVNGSKNPVVDEDGWQT--VGKMSSGIKDWLAGK---------TNHDVSGRTLRKASLPDAQGGKVVG-TKETKRRDQQRALDRR 848
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A6H5JVS9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS9_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 8.070e-95
Identity = 180/223 (80.72%), Postives = 201/223 (90.13%), Query Frame = 3 
Query: 2949 GDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIG----DHLQLRPKAEVYRLTKESRMGFDLDVSMFERLVEERRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQ 3605
            G+L VLQEA VVG+TTTGVAM+Q+LVEAL A +VVVEEAAEVMEAHILA LTQ TQ LILIG    DHLQLRPKAEVYRLTKESR GFDLDVSMFERLVEERRVP+ DLATQRRMRPEIADLIRP+VYPNLKDA  V+ YP V+GMRR +FF+DHAV EDKSGTVASSKTNR +EA+++SGLV+YL+KQGYT+ GDITVLTPYLGQLFVL+DVVG++SVL VQ
Sbjct:  594 GELAVLQEANVVGITTTGVAMHQSLVEALGATVVVVEEAAEVMEAHILAGLTQSTQHLILIGGPGGDHLQLRPKAEVYRLTKESRKGFDLDVSMFERLVEERRVPVHDLATQRRMRPEIADLIRPAVYPNLKDARQVQKYPPVEGMRRNLFFWDHAVPEDKSGTVASSKTNR-HEAKLVSGLVQYLLKQGYTDHGDITVLTPYLGQLFVLRDVVGNSSVLDVQ 815
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A388MBT3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MBT3_CHABU)

HSP 1 Score: 303 bits (777), Expect = 2.390e-80
Identity = 184/386 (47.67%), Postives = 251/386 (65.03%), Query Frame = 3 
Query: 2808 WHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMGFDLDVSMFERLVEERRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGT----VASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGTKGAEQSKP------TATVEVANVTVNS------LIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNAGKM 3917
            W LSR ER  + + W+  E  +  + L + ++ F  +     S     DL +L+ AQ+VGMTTTGVA +Q LV AL+ R++VVEEAAEV+EAH+LA L+  TQ L+LIGDHLQLRPK EVY+L+ +S  G++LD+S+FERLV     P+  L  QRRMRP I++L+R S+YP L+D P VETYP V+GM   VFF++H   E   G     ++ S+TN  YE +++ GL KYL  QGY   G+ITVLTPYLGQ   L+  +    V+ +   D+D     GM +  +  D G +G+ + +       TA +E    TV S       +R+ATVDNFQGEES+III+SLVR+N + +IGFL+S NRVNVMLSRA+HG+YI+GN   +
Sbjct: 1820 WSLSRAERRQLFQIWREEEFSMRLNDLREDMEKFSGLGDSLKSVYEAKDLSILKSAQIVGMTTTGVAKHQRLVTALAPRVIVVEEAAEVLEAHVLACLSAATQHLVLIGDHLQLRPKIEVYQLSMDSCRGYNLDLSLFERLVRFANFPVYTLEEQRRMRPCISELVR-SIYPTLRDHPCVETYPPVRGMLHDVFFWEHDHREWGGGNDDVEMSKSRTND-YEVKMVVGLAKYLFAQGY-RPGEITVLTPYLGQFQKLRTCLSQTMVVHIDERDKDELRKAGMIETESDGDLGNEGSTEGQQETGDGHTARLEKVEPTVVSKKPLEAAVRLATVDNFQGEESEIIILSLVRNNQDGNIGFLKSPNRVNVMLSRAKHGLYILGNVATL 2202
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A388L1F4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L1F4_CHABU)

HSP 1 Score: 296 bits (757), Expect = 5.520e-78
Identity = 182/392 (46.43%), Postives = 257/392 (65.56%), Query Frame = 3 
Query: 2775 PLKVIEDGKNP---WHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMGFDLDVSMFERLVEERRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDH---AVMEDKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGT-----KGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNAGKM 3917
            P + IE+  N    W L+  ER  +  +W     +    +L + ++ + +++ R ++ R   DL VL+ A VVGMTT+GVA +  LV AL  RIVVVEEAAEV+E HIL+ L+  TQ LILIGDHLQLRPK EVY L+K+SR G++LDVS+FERLV+  + P   L  QRRMRP IADL+R ++YP L+D   V+ YP VKGM   ++F+DH      ED+S   + SK N   EA +++G+ KYL  QGY +  +IT+LTPY GQL  L+ V+  + V+ V V++RD  +L   D    ++ E T     +  ++++ T    ++  ++   IR+ATVDNFQGEES I+I+SLVR+N +  IGFL S+NR+NVMLSRA+HG+Y+VGNA  +
Sbjct: 1083 PERTIEELLNVRDVWSLTPCERTKLFNHWIETIRKADLEKLEEDMRTYVKMRDRLNAIREMKDLSVLRNADVVGMTTSGVAKSLRLVTALGPRIVVVEEAAEVLEPHILSCLSAATQHLILIGDHLQLRPKVEVYELSKDSRKGYNLDVSLFERLVKHGKFPFYTLEEQRRMRPCIADLVRKTIYPKLRDHSSVKAYPPVKGMVHDIYFWDHDHPEAGEDESLGQSRSKFND-NEAYMVAGIAKYLFSQGY-KPDEITILTPYXGQLQKLRSVL--SKVMYVHVDERDEEQLLDADMNAEAEAERTGKTPKRSEDKTQLTDGPVISTKSLRESIRIATVDNFQGEESTIVILSLVRNNRDGKIGFLNSANRINVMLSRAKHGLYLVGNAATL 1470
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A1Y1IJP1_KLENI (NF-X1 zinc finger and helicase domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJP1_KLENI)

HSP 1 Score: 293 bits (751), Expect = 2.650e-77
Identity = 176/385 (45.71%), Postives = 246/385 (63.90%), Query Frame = 3 
Query: 2775 PLKVIEDGKNPWHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQG--DLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMGFDLDVSMFERLVEERRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNS--DDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNAGKM 3917
            P++V+   ++ W LS  ER  +   WQ+   ++ R +L   I+ + E+  RH+  +T    DL +LQ A++VGMTTTGVA  Q L++AL  R++VVEEAAEV+EAH+L +L+  T+ +ILIGD  QLRPK EVY L+  SR G++LDVS+FERL+ +   P+  L TQRRM P I++L+R +VYP LKDAP+V  Y  V GM   +FF+DH   E      + S  NR  EA ++ GLV YL++QG    G+ITVLTPYLGQL +L++++    V  VQ  +RD   L   ++   +    EG   A   +P     V   T    +R+ATVDNFQGEES ++IISLVR+N    +GF++  NR NV+LSRA+ GMY+VGNA  +
Sbjct:  875 PVEVLLRERDAWSLSMRERRKLHDRWQQERLRVGREQLLAGIRRYEEL--RHELRQTWDLTDLRILQGARIVGMTTTGVAKQQQLIQALGPRVIVVEEAAEVLEAHVLTSLSSRTEHVILIGDQEQLRPKTEVYELSVASRRGYNLDVSLFERLIADVNFPVYTLTTQRRMAPAISNLVRQTVYPTLKDAPNVMRYGPVPGMFHNLFFWDHDHAERSRDAESISFANRA-EAEMVVGLVAYLLRQGKA-VGEITVLTPYLGQLRLLRELLSKQVV--VQTEERDAEALQKAEEAAEARAGAEGEGKAPPEEPVWGAVVKRTTAKESVRLATVDNFQGEESDVVIISLVRNNERGSVGFVKEKNRANVLLSRAKKGMYLVGNAATL 1253
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A4U0U000_9PEZI (Uncharacterized protein n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0U000_9PEZI)

HSP 1 Score: 281 bits (719), Expect = 1.700e-73
Identity = 175/395 (44.30%), Postives = 243/395 (61.52%), Query Frame = 3 
Query: 2775 PLKVIEDGKNPWH-LSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMG-FDLDVSMFERLVEERR-------VPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMED-KSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGTK--GAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNAGKMSR 3923
            P++ ++      H +SR+ R  +  +W    A+  R  LA HI      K++ D  R   D  VL EA ++G+TTTG+A N   +  L +++++VEEA EV+EAH+L A+    +  ILIGDH QLRP+ + Y L+ E       LD+S+FERLV  R        +P   L TQRRM P+I+ LIRP++YPNLKDAP V  YP V GM+  +F+ DH VMED K G+  S+     YE R+++ LV +L+KQG     +I VLTPYLGQL  L+       V+++ +N+RD  +L    D G  DD   +  GA +S       VA  T++  +R+ATVDNFQGEE++++IISLVRSN   D GFL++SNRVNV+LSRAQHGMYI+GN+    R
Sbjct:  826 PVRTLQATSQDVHAMSREGRRNLYNSWVEEHAETLRGELAIHISGCKRDKEQLDEVRGDLDSRVLSEASIIGVTTTGLARNLNNLRKLQSKVLIVEEAGEVLEAHLLTAMLPSVEHAILIGDHQQLRPRVQNYDLSSEKPGNEIGLDISLFERLVRPRGGESGHHVLPYSSLETQRRMHPDISQLIRPALYPNLKDAPTVMGYPEVVGMQERLFWLDHRVMEDGKDGSAQSTSRTNTYEVRMVTALVGHLVKQGVYRAEEIAVLTPYLGQLRRLRSAFN--GVVEIVLNERDTDDLVREGD-GEEDDAELEIAGARRSS------VAKGTLSQALRLATVDNFQGEEAEVVIISLVRSNERGDCGFLKTSNRVNVLLSRAQHGMYIIGNSSTSKR 1211
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A433DN31_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DN31_9FUNG)

HSP 1 Score: 278 bits (710), Expect = 1.490e-72
Identity = 164/388 (42.27%), Postives = 248/388 (63.92%), Query Frame = 3 
Query: 2775 PLKVIEDGKNPWHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMG--FDLDVSMFERLVEE--RRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCD------IGFLRSSNRVNVMLSRAQHGMYIVGNA 3908
            PL+++E+  + W++S  ER  +  +W+     +    +   ++   +++Q+  +   +   ++L+E+ V+GMTT G A  Q LV +++ RI+V EEA EV+E+HILA L+  TQ L+LIGDHLQLRP+   Y+L+ +S +G  ++LD S+FERLV      +P+  L TQRRMRPEIADLIR ++YP+L D   V  YP+V GMR+ +FF DH+  ED      +      +E  ++  LV+YLI+ GY + GDI VLTPYLGQ   L+  + ++ +L +  ++RD+ +LD M+     D+ G K A +  P + V+   ++V   I + T+DN+QGEE+KI+IISLVR+    D      IGFL+S NR NV+LSRAQHGM+I+GNA
Sbjct:  958 PLELLEENGDVWNMSLTERKRLNESWKPPIQGIMLDDMKRLLEESEKIEQKMKNAYDEVRRLILKESTVIGMTTNGAAKFQTLVASVAPRIIVCEEAGEVLESHILATLSASTQHLVLIGDHLQLRPQVATYKLSTDSPVGKNYNLDKSLFERLVTASVHPLPMSHLTTQRRMRPEIADLIRLTLYPDLIDGGAVMNYPNVSGMRKNLFFMDHSHPEDSKDQFGAQSFANSFEVEMVEALVQYLIRNGYNKPGDIAVLTPYLGQFAKLRKALQNSFMLVI--DERDQDQLDEMEAKAEEDEGGEKPANRETPKSGVK--EISVQKHITLRTIDNYQGEEAKIVIISLVRNARTQDGTAGRGIGFLKSPNRTNVLLSRAQHGMFILGNA 1341
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A433QFR5_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QFR5_9FUNG)

HSP 1 Score: 275 bits (704), Expect = 1.640e-71
Identity = 163/388 (42.01%), Postives = 247/388 (63.66%), Query Frame = 3 
Query: 2775 PLKVIEDGKNPWHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMG--FDLDVSMFERLVEE--RRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCD------IGFLRSSNRVNVMLSRAQHGMYIVGNA 3908
            PL+++E+  + W++S  ER  +  +W+     +    +   ++   +++Q+  +   +   ++L+E+ V+GMTT G A  Q LV +++ RI+V EEA EV+E+HILA L+  TQ L+LIGDHLQLRP+   Y+L+ +S +G  ++LD S+FERLV      +P+  L TQRRMRPEIADLIR ++YP+L D   V  YP+V GMR+ +FF DH+  ED      +      +E  ++  LV+YLI+ GY + GDI VLTPYLGQ   L+  + ++ +L +  ++RD+ +LD M+     D+   K A +  P + V+   ++V   I + T+DN+QGEE+KI+IISLVR+    D      IGFL+S NR NV+LSRAQHGM+I+GNA
Sbjct:  977 PLELLEENGDVWNMSLTERKRLNESWKPPIQGIMLDDMKRLLEESEKIEQKMKNAYDEVRRLILKESTVIGMTTNGAAKFQTLVASVAPRIIVCEEAGEVLESHILATLSASTQHLVLIGDHLQLRPQVATYKLSTDSPVGKNYNLDKSLFERLVTASVHPLPMSHLTTQRRMRPEIADLIRLTLYPDLIDGGAVMNYPNVSGMRKNLFFMDHSHPEDSKDQFGAQSFANSFEVEMVEALVQYLIRNGYNKPGDIAVLTPYLGQFAKLRKALQNSFMLVI--DERDQDQLDEMEAKAEEDEGSEKPANRETPKSGVK--EISVQKHITLRTIDNYQGEEAKIVIISLVRNARTQDGTAGRGIGFLKSPNRTNVLLSRAQHGMFILGNA 1360
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: R7Z528_CONA1 (Uncharacterized protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7Z528_CONA1)

HSP 1 Score: 274 bits (701), Expect = 2.260e-71
Identity = 167/377 (44.30%), Postives = 242/377 (64.19%), Query Frame = 3 
Query: 2814 LSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMG--FDLDVSMFERLVEER-----RVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVME---DKSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELD--GMDDIGNSDDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNA 3908
            ++ +ER T+ R W R+    ++      +  F E K+++D  + + DL  LQ+A V+G+TTTG+A N  L+  + A+ ++ EEA EV+EAHIL AL    +  ILIGDHLQLRP+ + Y L+ E+  G  + LDVS+FERLV+       R+P   L  QRRM P IA L+R ++YPNL D+P V  YP V GMRR +F+FDH+  E   D+   V +S +N  YE  + + LV YL++QG  +  DI VLTPYLGQL  L+  +  +S  ++ +NDRD  EL   G++    +D+    G  + +    V V  +T+   +++AT+DNFQGEE+K+++ISLVRSN+  + GFLR+SNR+NV LSRAQHGMYI+GN+
Sbjct:  716 MTHNERATLHRYWVRMNRAQAQREFQAVLASFEEGKKQYDQVKQETDLRCLQKANVIGITTTGLARNLDLLRRVHAKALLCEEAGEVLEAHILTALLPSVEHAILIGDHLQLRPQIQNYELSSENAGGRKYSLDVSLFERLVQPDDASSVRIPFSVLEIQRRMHPSIAQLVRDTLYPNLLDSPSVAQYPPVAGMRRRLFWFDHSEPEANADQQQAVTTSHSNN-YEVEMTASLVSYLVRQGVYQANDIAVLTPYLGQLQKLRKRL--SSSYELVLNDRDLDELHKAGLESPAEADEPKIPGVPKPEQ-HDVGVGKITLLIALKVATIDNFQGEEAKVVVISLVRSNNKNNCGFLRTSNRINVALSRAQHGMYIIGNS 1088
[Close]
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Match: A0A6A6WE08_9PEZI (Uncharacterized protein n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6WE08_9PEZI)

HSP 1 Score: 275 bits (702), Expect = 2.570e-71
Identity = 159/378 (42.06%), Postives = 235/378 (62.17%), Query Frame = 3 
Query: 2808 WHLSRDERWTVCRNWQRLEAQLSRSRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVEALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLTKESRMG--FDLDVSMFERLVEE------RRVPILDLATQRRMRPEIADLIRPSVYPNLKDAPHVETYPSVKGMRRPVFFFDHAVMED---KSGTVASSKTNRLYEARIISGLVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAELDGMDDIGNSDDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEESKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNA 3908
            W +S+ ER  + ++W    A   R  +A  I    + K  H   R Q DL  LQ+A+++G+TT+G+A N  L   L A+++ VEEAAEV+EAH+L A+    + ++LIGDH QLRP+ + Y L++ES  G  + LD+S+FERLV         R+P   + TQRRM P I+ LIR ++YP LKD   V+ Y  V GMR  +++FDH V ED        A+SKTN  +E  +++GLV +L+KQG  +  +I VLTPYLGQL +L+  +  +    V + DRD+ E++              G    +  ++ ++A  T+   +R+ATVDNFQGEE+K++++SLVRSN     GFL++SNR+NV+LSRAQHGMYI+G++
Sbjct:  859 WSMSKQERKKLHKHWTERSAAFLRQEIATSIAAHQKAKASHRKIREQLDLRCLQDAKIIGVTTSGMARNLDLFRRLRAKVLCVEEAAEVLEAHVLTAMLPSVEHILLIGDHFQLRPQVQNYELSQESPRGKQYSLDMSLFERLVAPPDGIPATRLPFSTIETQRRMDPSISRLIRNTLYPALKDDDSVKAYEPVAGMRNRLYWFDHRVPEDAVTSEDMNATSKTNA-FEVEMVAGLVTHLVKQGAYQADEIAVLTPYLGQLMLLRSRLSQSQAFVVALGDRDQDEIE------------KAGLSTEEADSSTQIAKTTLLCALRVATVDNFQGEEAKVVVVSLVRSNPERKCGFLKTSNRINVLLSRAQHGMYIIGDS 1223
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig829.15927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR9_ECTSI7.640e-23258.24NF-X1 finger and helicase domain protein, putative... [more]
A0A6H5JVS9_9PHAE8.070e-9580.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A388MBT3_CHABU2.390e-8047.67Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388L1F4_CHABU5.520e-7846.43Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A1Y1IJP1_KLENI2.650e-7745.71NF-X1 zinc finger and helicase domain protein n=1 ... [more]
A0A4U0U000_9PEZI1.700e-7344.30Uncharacterized protein n=1 Tax=Salinomyces thaila... [more]
A0A433DN31_9FUNG1.490e-7242.27Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A433QFR5_9FUNG1.640e-7142.01Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
R7Z528_CONA12.260e-7144.30Uncharacterized protein n=1 Tax=Coniosporium apoll... [more]
A0A6A6WE08_9PEZI2.570e-7142.06Uncharacterized protein n=1 Tax=Pseudovirgaria hyp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig829contigH-elongata_contig829:293..18907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score520.0
Seed ortholog evalue1.1e-144
Seed eggNOG ortholog2880.D8LCR9
EggNOG free text desc.Nfx1-type zinc finger-containing protein
EggNOG OGsCOG1112@1,KOG1807@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons30
Model size3926
Cds size1347
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig829.15927.1prot_H-elongata_contig829.15927.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig829 293..6536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931235.3411896-CDS-H-elongata_contig829:292..3651622931235.3411896-CDS-H-elongata_contig829:292..365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 293..365 -
1691679753.5804875-CDS-H-elongata_contig829:292..3651691679753.5804875-CDS-H-elongata_contig829:292..365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 293..365 -
1622931235.3604734-CDS-H-elongata_contig829:1376..14661622931235.3604734-CDS-H-elongata_contig829:1376..1466Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1377..1466 -
1691679753.6004121-CDS-H-elongata_contig829:1376..14661691679753.6004121-CDS-H-elongata_contig829:1376..1466Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1377..1466 -
1622931235.3759856-CDS-H-elongata_contig829:1639..17971622931235.3759856-CDS-H-elongata_contig829:1639..1797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1640..1797 -
1691679753.609643-CDS-H-elongata_contig829:1639..17971691679753.609643-CDS-H-elongata_contig829:1639..1797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1640..1797 -
1622931235.3928773-CDS-H-elongata_contig829:1981..21321622931235.3928773-CDS-H-elongata_contig829:1981..2132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1982..2132 -
1691679753.6176085-CDS-H-elongata_contig829:1981..21321691679753.6176085-CDS-H-elongata_contig829:1981..2132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 1982..2132 -
1622931235.4094532-CDS-H-elongata_contig829:2372..25991622931235.4094532-CDS-H-elongata_contig829:2372..2599Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 2373..2599 -
1691679753.6254268-CDS-H-elongata_contig829:2372..25991691679753.6254268-CDS-H-elongata_contig829:2372..2599Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 2373..2599 -
1622931235.4310575-CDS-H-elongata_contig829:3475..35701622931235.4310575-CDS-H-elongata_contig829:3475..3570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 3476..3570 -
1691679753.6333568-CDS-H-elongata_contig829:3475..35701691679753.6333568-CDS-H-elongata_contig829:3475..3570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 3476..3570 -
1622931235.4822116-CDS-H-elongata_contig829:4522..45831622931235.4822116-CDS-H-elongata_contig829:4522..4583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 4523..4583 -
1691679753.6410575-CDS-H-elongata_contig829:4522..45831691679753.6410575-CDS-H-elongata_contig829:4522..4583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 4523..4583 -
1622931235.5012488-CDS-H-elongata_contig829:5352..55181622931235.5012488-CDS-H-elongata_contig829:5352..5518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 5353..5518 -
1691679753.6486096-CDS-H-elongata_contig829:5352..55181691679753.6486096-CDS-H-elongata_contig829:5352..5518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 5353..5518 -
1622931235.5158074-CDS-H-elongata_contig829:5790..59121622931235.5158074-CDS-H-elongata_contig829:5790..5912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 5791..5912 -
1691679753.6560552-CDS-H-elongata_contig829:5790..59121691679753.6560552-CDS-H-elongata_contig829:5790..5912Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 5791..5912 -
1622931235.531765-CDS-H-elongata_contig829:6225..63471622931235.531765-CDS-H-elongata_contig829:6225..6347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 6226..6347 -
1691679753.664008-CDS-H-elongata_contig829:6225..63471691679753.664008-CDS-H-elongata_contig829:6225..6347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 6226..6347 -
1622931235.5460098-CDS-H-elongata_contig829:6454..65361622931235.5460098-CDS-H-elongata_contig829:6454..6536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 6455..6536 -
1691679753.6717672-CDS-H-elongata_contig829:6454..65361691679753.6717672-CDS-H-elongata_contig829:6454..6536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig829 6455..6536 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931235.5722187-UTR-H-elongata_contig829:6536..66411622931235.5722187-UTR-H-elongata_contig829:6536..6641Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 6537..6641 -
1691679753.6794076-UTR-H-elongata_contig829:6536..66411691679753.6794076-UTR-H-elongata_contig829:6536..6641Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 6537..6641 -
1622931235.5852835-UTR-H-elongata_contig829:6653..71861622931235.5852835-UTR-H-elongata_contig829:6653..7186Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 6654..7186 -
1691679753.6871088-UTR-H-elongata_contig829:6653..71861691679753.6871088-UTR-H-elongata_contig829:6653..7186Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 6654..7186 -
1622931235.5977352-UTR-H-elongata_contig829:7464..76201622931235.5977352-UTR-H-elongata_contig829:7464..7620Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 7465..7620 -
1691679753.696649-UTR-H-elongata_contig829:7464..76201691679753.696649-UTR-H-elongata_contig829:7464..7620Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 7465..7620 -
1622931235.609395-UTR-H-elongata_contig829:8665..88151622931235.609395-UTR-H-elongata_contig829:8665..8815Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 8666..8815 -
1691679753.7106016-UTR-H-elongata_contig829:8665..88151691679753.7106016-UTR-H-elongata_contig829:8665..8815Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 8666..8815 -
1622931235.6262453-UTR-H-elongata_contig829:9079..91541622931235.6262453-UTR-H-elongata_contig829:9079..9154Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9080..9154 -
1691679753.718487-UTR-H-elongata_contig829:9079..91541691679753.718487-UTR-H-elongata_contig829:9079..9154Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9080..9154 -
1622931235.6387281-UTR-H-elongata_contig829:9350..94861622931235.6387281-UTR-H-elongata_contig829:9350..9486Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9351..9486 -
1691679753.72872-UTR-H-elongata_contig829:9350..94861691679753.72872-UTR-H-elongata_contig829:9350..9486Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9351..9486 -
1622931235.6545362-UTR-H-elongata_contig829:9818..99071622931235.6545362-UTR-H-elongata_contig829:9818..9907Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9819..9907 -
1691679753.737749-UTR-H-elongata_contig829:9818..99071691679753.737749-UTR-H-elongata_contig829:9818..9907Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 9819..9907 -
1622931235.6733232-UTR-H-elongata_contig829:10808..108821622931235.6733232-UTR-H-elongata_contig829:10808..10882Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 10809..10882 -
1691679753.7488916-UTR-H-elongata_contig829:10808..108821691679753.7488916-UTR-H-elongata_contig829:10808..10882Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 10809..10882 -
1622931235.690074-UTR-H-elongata_contig829:11072..111991622931235.690074-UTR-H-elongata_contig829:11072..11199Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11073..11199 -
1691679753.761381-UTR-H-elongata_contig829:11072..111991691679753.761381-UTR-H-elongata_contig829:11072..11199Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11073..11199 -
1622931235.704475-UTR-H-elongata_contig829:11463..115761622931235.704475-UTR-H-elongata_contig829:11463..11576Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11464..11576 -
1691679753.7766702-UTR-H-elongata_contig829:11463..115761691679753.7766702-UTR-H-elongata_contig829:11463..11576Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11464..11576 -
1622931235.7230473-UTR-H-elongata_contig829:11877..119941622931235.7230473-UTR-H-elongata_contig829:11877..11994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11878..11994 -
1691679753.7938192-UTR-H-elongata_contig829:11877..119941691679753.7938192-UTR-H-elongata_contig829:11877..11994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 11878..11994 -
1622931235.7375345-UTR-H-elongata_contig829:13997..141091622931235.7375345-UTR-H-elongata_contig829:13997..14109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 13998..14109 -
1691679753.803458-UTR-H-elongata_contig829:13997..141091691679753.803458-UTR-H-elongata_contig829:13997..14109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 13998..14109 -
1622931235.7564042-UTR-H-elongata_contig829:14978..150951622931235.7564042-UTR-H-elongata_contig829:14978..15095Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 14979..15095 -
1691679753.8120537-UTR-H-elongata_contig829:14978..150951691679753.8120537-UTR-H-elongata_contig829:14978..15095Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 14979..15095 -
1622931235.77432-UTR-H-elongata_contig829:15351..154841622931235.77432-UTR-H-elongata_contig829:15351..15484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 15352..15484 -
1691679753.8213606-UTR-H-elongata_contig829:15351..154841691679753.8213606-UTR-H-elongata_contig829:15351..15484Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 15352..15484 -
1622931235.7908185-UTR-H-elongata_contig829:15734..157931622931235.7908185-UTR-H-elongata_contig829:15734..15793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 15735..15793 -
1691679753.832132-UTR-H-elongata_contig829:15734..157931691679753.832132-UTR-H-elongata_contig829:15734..15793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 15735..15793 -
1622931235.810117-UTR-H-elongata_contig829:16224..163541622931235.810117-UTR-H-elongata_contig829:16224..16354Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 16225..16354 -
1691679753.844563-UTR-H-elongata_contig829:16224..163541691679753.844563-UTR-H-elongata_contig829:16224..16354Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 16225..16354 -
1622931235.8260877-UTR-H-elongata_contig829:16843..169261622931235.8260877-UTR-H-elongata_contig829:16843..16926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 16844..16926 -
1691679753.8547335-UTR-H-elongata_contig829:16843..169261691679753.8547335-UTR-H-elongata_contig829:16843..16926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 16844..16926 -
1622931235.8499975-UTR-H-elongata_contig829:18110..182161622931235.8499975-UTR-H-elongata_contig829:18110..18216Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18111..18216 -
1691679753.8653948-UTR-H-elongata_contig829:18110..182161691679753.8653948-UTR-H-elongata_contig829:18110..18216Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18111..18216 -
1622931235.8648224-UTR-H-elongata_contig829:18403..185251622931235.8648224-UTR-H-elongata_contig829:18403..18525Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18404..18525 -
1691679753.884567-UTR-H-elongata_contig829:18403..185251691679753.884567-UTR-H-elongata_contig829:18403..18525Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18404..18525 -
1622931235.8760173-UTR-H-elongata_contig829:18865..189071622931235.8760173-UTR-H-elongata_contig829:18865..18907Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18866..18907 -
1691679753.8988404-UTR-H-elongata_contig829:18865..189071691679753.8988404-UTR-H-elongata_contig829:18865..18907Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig829 18866..18907 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig829.15927.1

>prot_H-elongata_contig829.15927.1 ID=prot_H-elongata_contig829.15927.1|Name=mRNA_H-elongata_contig829.15927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp
MPLNCDAGVSQRTCRRGKAFRSNPSKYRDESDTSHESDETVEDGQVDKTL
IHPDQPVEFSTDDRTPLKVIEDGKNPWHLSRDERWTVCRNWQRLEAQLSR
SRLADHIQHFFEVKQRHDSHRTQGDLVVLQEAQVVGMTTTGVAMNQALVE
ALSARIVVVEEAAEVMEAHILAALTQETQQLILIGDHLQLRPKAEVYRLT
KESRMGFDLDVSMFERLVEERRVPILDLATQRRMRPEIADLIRPSVYPNL
KDAPHVETYPSVKGMRRPVFFFDHAVMEDKSGTVASSKTNRLYEARIISG
LVKYLIKQGYTETGDITVLTPYLGQLFVLKDVVGHASVLKVQVNDRDRAE
LDGMDDIGNSDDEGTKGAEQSKPTATVEVANVTVNSLIRMATVDNFQGEE
SKIIIISLVRSNSNCDIGFLRSSNRVNVMLSRAQHGMYIVGNAGKMSR*
back to top

mRNA from alignment at H-elongata_contig829:293..18907-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig829.15927.1 ID=mRNA_H-elongata_contig829.15927.1|Name=mRNA_H-elongata_contig829.15927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=18615bp|location=Sequence derived from alignment at H-elongata_contig829:293..18907- (Himanthalia elongata Himel1 dioecious)
GCAGAGGGCCTATGGGGGAGGGTATTGGACGAATCTTTGAAGGTAAAATA
TTGACAATGCTTTTCTGAATTGTATTTTTGATTAATTTCGTCTCACGACA
ATAATTCCTAAAATCATCCCTAGATACCAATTTGCAAAAAAGTACTATCT
TTTTAGAGCTAAGAGATAAAAGAGTGGAAAGTAAAAAGTATTATAAGAGA
CCTACATTACCCCATGTTTTGGGTAATACAGGGTCAAAGATATTTTGGCT
TGTCGTAAAATATTACTGTCTTTTTTCGATGAATGTCTTTTCACTTGTCG
ACAAACAGTCATGTTTTGTCAAATAGGTGGGACAAAAAATGTTAAAATAC
AACAACGCTCGAATTTATCTGCTATTCGCCAGCTTGCCAAGCGCGGGAGC
TTGCGGGACACATCCTACACAATGTACGACCGCCGTCGAGACCTAAGAGG
ACACAGTGTCTGGGAACCTCTGACATGGGCAGATGTTACCCTTCCCATCG
CGAGGTGTGTATTAAAGCAGTTATGGAGAAAGACCCAGGCGATGGAGAAT
GCTATCTACGTCGGAGTCACTCTCCGTTCAATTAGCAAAAGACGTCACAT
GCATGCACAGAACATACATTGAAGCACTGTTTTTCGCATCTGCATCTTTT
TATTCCGGCCGATCCATACCGCCCGACACCCATACTGTCAGATTTATGGT
TGAAGTTACAAAGCGATTCCGTGACGCTGTACTGGTGGACAAGGACTTCC
AACGAGGGGCAACGGACACTCTGCCGGCACTTGTCGCCCAGTGGAAGGTA
GCTTTAGAGAATGTACAGCCATGTTTTAGTCAGGAATGCATCGGCTTTAA
AAACTCATCACCCGCAGTAATTTACATTCCACATTTTGGTGATTCGTCTC
TAGAACTATGTTTTTCTGAAATGTTTTGGAGAGTAGCACAAGCCAAATCG
GGAGGAAACTAACCGAAAGGTATATAAGGGAGCTGAAATCGCGACAATGG
ACATAAATAACTCTTGCCGTGAGCAAAACACTCGGCAAGTAGGGCGCCAC
AAGTCCGTATGACTAAGGGTAACATTGTTGTATAGTGTTTAAAATTTTGT
GTTGGCGACCTTAACTTACCTTGGTATGTGCTTCCTCTCATGTTTGTTAG
CCACAGTCACAGCATTGGTATCGTATTCTTAGTTTAGATCGTATCCTTGT
AGAAAAGAGCCCAAAATCAAAATGTTTTTTACGAAAGTTAAGCAAAACTG
ACTTCAATACTTCAATGAAACTAAACACTAAAATAATAGTAATTCCTGTA
ACTGAGCGTAGGTTTTAATAAAAAAACTAAATATAACCTACCAGCCACAA
GAAGTGAGGTGGGGATGAGGTCAAGTCCTCATGGCCCTTAGGAACTGGGC
TCTAATGAGCTTACAATTATAACCTGATAAGGGTTGATCACCTAAACTTC
ACCCCTCATTTTGTAAAGAAGGGGTGGGTGTTCGAAGGGTTTAAATGAGT
CCATAGCTTTTTTAGTGAGAAAACATTAGGGCTTCAAAGAAATACGTGGA
TGTCAGAGAGTATTAAATGATTTCAAATGTCTTGCACACGCCTATACTCA
CGATAGGCATTCTCTCTTGCTCGGAGACTTTTTATGGCGTCGCTTTTTGC
TGTTGGCTCGTAGCACTTGGATAAGGGGGAGGTAGGAGGCAACATTCAAA
ACATCGATAACGCTATTTCAGCCCCGTTGACAGTGCGCGATTTTAGCCTG
ACGCTTTCGTTGCTTTTCTTTTGTACAAGGTACCGCACGTTTATCGTGAT
TATTTCCGGCTGCCCCGTTTTGACGATGTAAGTTTTTTTTGTGCATCTCC
CAGGAGAGATCGTCGCACCCATGGAAACAAGAAAACATATCCCATGTTTA
TCGATTTCTTTTATTTTATTGCATGGCACTGGCCCTGGTTAACACGTTTT
CACTCGGCGTGTCGTCATTGGTCGTTGCTAGGCACACAAGGGCAATCTAC
AGACGATATCACCTTCTCGTGTCCAAGAGCTTGAGGTCGATGACGCAATG
GCTAACCTCAAGAGGTATTGTACATTCGGTTCATCGCAAAGGGAAATAAG
TTAGCTCCATTTAGCTCCACTGGTTACCCCTACATAGATGGAATTATTCT
CCTGCAGGAGCGCTTCCCGTAAGTAGTGTGTTACCTTCAAACCGTGTCAG
GCTGGTGCCGTTTAATTTTCGCGGTGGTACCTACCTCCCTCTATAGATAA
TTAGTGGAGACGCGCGTAAGGAATCTAAGGCATGCCAAAGAATGATCCAA
TGGTGAAAATCACGGTAAAGAGAAAACGGCCCCACCCATTTAAAATGCCT
GATCGGTTCCCCAATTGATTTGCGTACATGATATATATATATAAGGTAGC
ATTACACAAAAGAGGTGAGTGATACCATCTCCTGAGGCTTTAAATTAAAA
AAAAACGCCTCCGTGTGCACAAAGTCTACACCCAGACTTTCAGCTTCGTT
ATCGATGACAGCTTCGTTATTCGTTATCGATGACGCAAACTAGGGCAATG
GAGTCTACCCTTCAGATACTGTCAGATACTGCGGACGTCGGAGGAGGCAA
GGACTGCTAGAGATGCACACAAGAATGCCAGCGCATCTCGATCGGATCTA
TTCAATCTCTCAGAATCTCAGGCTCAGGCTCAGGTGTGCAATTCGAAAGA
TAAGCCCATTTATGACCAGGCGTGTAATATCAATGTGTTCCTGCTGATGG
TTGGCTTCTAGACCTCAAGTCACATAACCACACGCAGTTTTCGTCGCCAA
CGCCTTTTTCATCCCCCGCCACATTTCACGTTCTGTTTGAAATCGTCAAG
CCGTTGTACGTCGATGTTTCCCAAGCACTCCTCTTCTTTCTTTTCTCTTT
AATATGCACACACATATATACATATATACAGTATATATATATATAACAAA
AAGCTAATGAGCATTCATTTGACGAAAAAATGGAAGGCCGCTCTCGCGTG
TAATGTAGTTCATAATTTTGGCTTGGAAGTGATGTTAACGATGTATTTAA
ATGTGCTCACCACACCGTACCGTTTTTTGTGTTAAAATAACTTAAACATC
TTACAACAATTAAGGGTCGCCATGCTGGCCAAGGGTACGATGGTCCGGGC
CGCTTCAGCAGGTTGGGTGTAAGGTACGCTAGCGTCAAACAAGCCGGCCA
TATGCCGGCGTTATAAAAACATAATCTGCCTAATCACATGCCGATGCAGA
TATATGGCTGCTTCCGGATGAAGGCGGCTTGGGTCGTCGGAATTATTTTG
AGGTAAAGGCGAAATGGCATATCCGGAAAACCCAAGTTGGATTGTTTTGT
TTTCCTACTGGTTCACTTCCGGTTGTTACAATATCGTTGAATGTTCTCAC
GGTCGACATATCCTTCAAAACAGGAGGCATGATAACGACAGGGAGAGAAT
TATGGATATATCAGTCCCGCCCACTGCCGGAGAGATCGTATGCGAGAGGG
CTCCCTTCGTTCCTCGTGACGCTCCGTCGACGTGGAGCAACATGGAGCAC
CTCAAGGTGATACGCGGGGGAAAATATGGATAATTGAAGACTTGGAACAG
GACTTTGAAAACAAGAGCCCGTCATTCCGGTGATTAACTCTTGAGCTAAA
CGCCCAAGTAAGTCCCACGATGAATCCTCCCAATTCCCAGTAATGTAAGC
CTCCTTAATAGAGAAACCCACAAAAGCAATAATGATACTGTCAATACTCA
ATGCGACTACCTCGATGGTAACCACAGTACCAATACTTTCCCCCATTCTT
TTCCCTTGAAAGCCCCTCGATGCAGGATCTTCCGCCGCTATTATGGACGT
CCACTTCAGACTTCTTCGCCAGGACTTCATCGAGCCCCTCCGCGAGGCGG
TTCTCGGTTACCGCAGGGAGCAAAAAAATGTAAGTTTCCTAAAGTCTACA
CGTTTTTTTCTTGAAACCATATGAACTCATTCAAACCCTTTTAATATTCA
AGCCTTCAAAGTCTATGGATGGAAGTCCAGAGGACCAACTATCGTCATGT
CGGAGTGTGTAGGATACTAGTTAATAGTGAGGACGACGAACTGAAACATT
TAAAGAGATTCTAGGGGTTGTATTATACCTTCAAGGTTTTGGTAAACATA
CAAGAAAATAATAGAGCAAAAAAGCCAGCACATTTTAAAAGAAAAATATT
TTAAAAGTTTTCCTAAAGGGTATAGGTAACTTACGAAAAGGCCATGATTT
TAAAGTTTATACTTATTATCATTTAAGTATAAAGAAATATGAGGCAGAGT
AACATTTAGGGCCCAGATGGGATTTGCATAACTTTCAAGTTTAAAACAAT
AAAATACCAGTAATAATCAATTAAATATATTTCACTGATTTTCGTGTTGA
TGTTTCGTATAAAGTTTTATAAAGGTCTAAAAGTGAAGATGGGTCAATTG
GGTGTTGAGAAATGGAAAGGCTGCCAACGAGGGTTATGCATGGTAGGTAC
ATTTTTTTTTTTTTTTTAATGTTTTGCCTTCTCCAAACCACGTTAAATAT
TTAAACCAGGGCACGAGACTGTCGTCATTCGCTTCGTTGCTGTACTATGT
ACTTTTCCGGGTGCACAAGCGCGCGCTCTGGCACTCATGGAGTCTTTCTC
AGCTCAAGCACGCAACAAATGGTCGAAAATATATATCCTGCGTTTTCTGC
GTCCGATTGTTTTAGCCTCAAATATACCGACCCCTGGGATTGAAAACGGC
TGCCACAGCTCTCTTTCCTATGCTTGTTACTTGATCGTTGATACCCAGAA
GGGCAGCCGTGGTGGTGGCCGTGGAGGCGTTTTCAAAGCCAAAACGGAAG
GAGGGAGGTCCTTCATGAGCTTGTTCGTGTTTAAAAATGTCCAAGTTGTA
GGCATTACAGGTGCCGTGTTGCGATCGAAAGGCTGCAGCGAAAAATATTC
TTTTATATTCGATGGGTCTATAATGTGACATCAATCCACAATCATCTCGG
TGCAAGTCTTTGAAGATTCCCGGCAACTGTAAAATGCGTGGCCTTCGGAG
AACTAACATGCGAGCATTGGCCAAGCTCTTGTGACGATTAGATTGCTAGC
AGCATAGGGTGCTATTTCAGTTGTCTCACGACTCTGGTTCCTCTGCTAAG
CTGCGTTTTCATCTTTTTGTACTCCTTTCGGTGACGCTGCTCTCCCAAGA
CATCCAGGTGTGTTCTGGTTTCTACTCTTCTTCTGTTCGATTTTGTTCGT
CTGTAATGTTTCGGCTGAAGATTACTTCCTCCTCCCCTTGCCTCCCACCT
TATATTCCACAGTCTCTCGTGCGTCCTGATGCTCTATGCTGATGCTCTCC
CTCCCTCCTCGTGTCGCCTTATCAGTAATAAATCTGTACTAATGAACACA
TATTATACTAAGTCCTAAGACCACGCCCCATCGTAGCTGAGCATCATGCC
TACGGCACTGCTCGCTCATTAGCCGTACGAACAAGATTATTTCTCCCCTT
TATAAAAATATCGTACTGACGACCTCATGATCTCCTAATAGACAAAATGT
GTACCTCACGCGTTAGTCACCTGGTAAATATTATTACACTGACTGGTTGA
CTGTAACCAATGACCGCTTTACCTCTTCCCTACAGGTATATCTTGCCTAG
CCCCTGAATTATATTGAGTTGACGTAAATAATGTACACATTTGATGTGAT
GTGTGCTAGCGTTTTTGAACGGAGAGTAGGAACGATTTCACTAATTCCCC
TTCAGATTAGGCCATTATACGCTCCCAGGATCTTATGTTAATTGAAATGC
ACTTATAAACATGTTCATTTTTAACCCTTAAATCACTCTCTAGACCTTGG
GCTGACGTCCCCATATGACTGGGAAATACGACTTATGATTTTTACTTATA
AAACCTTTGTGATCAGAGGTAGTATACTGCATGAAATTTGCATAAGCCCC
TAATCCCTCCCCTCTAATAAAATTCCATAACTGACGTGCCAATGAACTTA
ACATTAACTATTATGTCTGGAGCTGTCGCATTCAAGGTACACAACACCAA
ACCTGACGATAGTTGGTCCTTTAGACTGTATAACTCATGATGCTAACAAG
GCGTGGATAGTCGGAAGAAGTCAAATGCTTCTTTAAATTAATACGATGTT
AAGAAGAATTCCAAGCGAACCAATGAACTTACTATGATTTACCATGCGGA
AGATTTGGCGTGGATGTTCGGAGGGTTGGAATGAGTTCAAGGTTGCTCCC
CCTTGCAATCTCTAATTTAGTCGTGCTGCTACACGATAGTACTAGTTTAA
GTATCGATTTTGTGTTTAAATAAAACTAATCTAACGTAGCCCCTATGACA
CGGACTTACACATTATATAATGCAAGCCTATACATTATATAATAAAGTAA
CAGCAGTCTTTCACAATTTTATTAGTTTGGTTAACAATACGAGCTTATAC
ACTTTACACTATACATTAAACCTGAATGAGCCTAAAGTATTTTAAATATA
AATATAATAGAGCCCCTACAGGTAACCCTAATGTAGCCTCTATGAAACGG
ACTTATATCCCTAATTATCTAACCACTTTATGAGTAACCACCTCCCCCCT
GCTGATATTATAAATAAAAATAATCGATTGTTCTATACAATAGAGCCCGA
ATTATATTTCAGCCCCTAATATAGTTAGTAGTAACATAACATTAACATCA
TTATTGTTACAATTGTTTATGCTTATCCCTATTGTTCCTGCTCATTCCTC
CTTTCTGATAGTTGGTGCCCTGGATTGCACTTACAGTGACAAGAAGGTGT
GGATGTTCGTAGAGTTAGAATGAGCATAAAGTCTTTTAAATAAAAATAAA
GCTCGTGATTTGGCACATGGTCGATTATGATTTTTGCTCTCCCTTAACGC
TCCCCCGTTGCAGGATCGTCGCGAAATGGTGTATGCGTGAGTCTGGAGTT
CGACAAACCTGAAGCGGTCAGGCGGCTGAGTGAAGCCAAGCAGAAAGACT
ACTGGGAGAGGACGGGACGCCTAGCTGTGGGTGGGTTTTAAGTAGCGCCT
AACTTAATCGATCATTTAATCAACATTTAATTTATTATAATTTAATCGAT
GGTAATTTAATTGATTATTTAATCGATAATAGTTTAATTAATGATCATTT
AATTATGACCGATGGTCTCAACAGGCAGTTAAGTCATGTGGACTGCCGTT
TTCTCTGTTCTACTTTTGTTAAGTCCTTAATTAATCGTATGCTTAGCGAT
CCACGTATGGGGTTTCTTAAAAGAGCTGGACGACTTCATGCATCTGAAAT
AATTTCTCAACAACTGCTGTAACCATTAAAGCAAACATGGTGGTGATATG
CGAAGACACGGATGCGAACGCGGGCACGAGTGACTCCGTCGAAAATGAGC
AGACAGGTGCCGGAGATGTCCTGCTCGTTTTTGCGGTGATATCGGTGAGT
AATGGCACAGTCAGACTAGTGATATTGGTGACTTAAGCCACGACATGGAG
TTGGTTTGCCGAGAGGGATGGACTTTCCGTCTACGAAAAGCAACTTCTAT
TGTTAACGATTAACGAATTTAACACGGTTAGCACGTCTCGTTTTTAGCGT
AAAATATACAAATGTAGGCAAGCGTGGGACGAAGCTGTGAAAGCACAGAT
CACGCATGTCAGCGCAATTGGTTTAGATCCGACTTTATAGCGTTTGTTGC
CCGCGCAGGAGAGGGATGTACAAAAGCTATGGAAAGGCGGCCAACGGGGT
ACGATTGGCGTTTCGTTTGATAGCTGCGCCGAAACGGTTGCCGGCCTCAA
GCAGATGCTCGATCGTGGGGGCCTGACTAGCAGCGGTAAGTCGAAAGTCG
TTCGCCACCGGACTTGCCTAGGCGGCCTCTGGCCCTTTTCTCGTTTTATA
AACTCGGCTTTATGTTCGCTTTATTAACATTTTATTATACTTATCCAAAG
TAGGTTAGCCCTTCTGCCATTGTGCATCTTCGATCTGCAACTATTGCTAC
TTTTCCCGTCCGCTGTCATTCACAGGTCGGCTTCTGATGCTACAACCCTC
GAATTCTTACTTCGCCTATCGGCCCATCCTGCAAGTCCTCAAGAGCGCGG
TAAGACCCTTTCGCTTTTTATAAGCCACCAATATACCGTAAGATTATTGG
CTGACCGTAAGATAATTGGCAGACCTTAAGATAATTGGCTGATCGTAAGG
TAATTGGCTGACCGTAAAATATTTGGCTGACCGTAAGATAATACCGTAAA
ATAATTGGCTCATGGGGTTTACGTAAATAGGTCGGACCCGTTAGTCAAGC
CGCCTTAAGGAATGTTGGCTTAGTATTGGCAGACTTTCGGAGGTAAGCAC
CATCGGTACGCAATTGAGTGACCTAATGAAATTGGGATTGAGCGGATGGC
GGTTGACGGTAGAGATGGACGCCGTCGTGGAAAACAGGAGGATTTAGAGG
ATCCTGGGAGTAAGCACCAGATTCAGCCTGGGTTGAGAGAATGAGCAGGC
TGACGACGAACGGGACTGCTGAACCCGTCTCGCGAAGCCAAATTCTAAGG
CACGGACGGGGACGGGGGAATATTAGTTTCCCTGTTCAGCTGACCACGAG
CAGAATACAACAAATCCGACTGAGCTTACTCTGCTTCATGTTATGACCAT
TCATATAAAAACATACATATCTGCAGTTGAGGTGGGTTTTGGCGTCTAGA
CCGCCTAGTTTTAAGAAACGCTTTGAAACTATCTGTAATGTATCCTTTGC
CATTAGAGCCAAACCTCAACATGAAAAGTAAACTAACAATATTGAACATG
TTAGGCACTCATGATGAAAAGGTTTTAATCGCGGTATTCGCGTATGAATT
TGAGACTAGTATCAAGGTATACTGCATGCTCGCTCCAGCTACAGAAGGTT
GTCTCAGGACTGCTAGCACTGCACCAAACCTTCTCGGGTCGACAATTCAT
CGAGTACAAAGAGCTGTAAACCCGACTTCCGAATACGAATGCGGCCTCAG
GCTCGAGAGGCAATCCCCTTTTCGGACATCCTGCTCCCGCCAGCTGAAGG
AGCAACTGTTGATCCTAGCGTCGCGGTCAGGCCCCCGAGGTATCTCTTAG
ATGGTGAGTTGGCCAGACCGTGATATCTAACTGAGTGCACTTAAGTATGT
TGTCGGTTCACATTTGAAGTTCGTTTTGCAGATCCACCATCTTATATCGT
CGACGATGGCCCTGGGTCACCAACCTTAAGGGAATATCAAGTAATTATGA
AAAATGACTCATAAATAGCTTTGCAGGGAAATTGAGCAATTAAGGTGCCA
TCGCCCGTATTTCTTTGATATGCCCAAATCGCTAGATATCTTTTTTCTTA
CCTCTGTAGCTAATATTGTACGCCGCTTCGATTCCGTTACCGATGAATCT
GTTTCTTTCTGTAGCGGACAGTTACGACCTTTCGGACATCGCGAACCGCG
CAAACGATTTCGACGTTACTGTCGCTTCGGCTCTTTCCTCGGTGAACATG
AGAGACCCTGCAAGTTTTCCAATCGCTCAGCTGCTGAAGAAGACGACCCT
TGATAAGGTGATGACCAAAATAATCAAAGAACGATACAAAATACAGCTCC
TGCTCTCGTACGTCTAACGAAATATTAACGATGGACTCGGCAACCGTCAT
TCAAATAGTACAGCACGCACCACTTATTTGGCTTGAACGTCCGAAAGCCA
ACACGTAAATATATAATATATATGTTGTCTGTTTTTGGACATCTGCACAT
CAGGCTCAGCTCACGGCACTTCTAGCTGCCCTCTCAAGGGAAGTGACGCT
CATACAGGGACCACCGGGCACCGGAAAGGTAACTCGATTTGTAACAACAC
AGCAGGTGGTATAGCTTTGGTTACTGATAATATGTAGCATGCTTCTTTCG
ACCCATTCCTTATTCCGGCCATGAAGTTACTCTTCAGGATTGTGTTTGAC
ACCGTTGCTACTTCTCAGCCTCCGATATTCCCTCGCCCCTTTTAGGGTAT
TGGTGGTCGTCGAGTAAAGAACTAAGCGTGAGGTGCTTCCTCTCCCCTGC
TGTGACGCTCGCCGCATGTAACATGTTTCTCGACGCATCTAGACGTTCGT
GGGGGCGAAGGTGGTGCGTTTGCTGCTGACCAACAGATCTCTCTTGAAAC
ACTGGGAGGGTCCCATCATGTGCGTCTGCCTGACGAATCACGCCTTGGAT
CAGTTCCTCGGAGACCTGATCGATGCCGGTGTGGAAGGAATCGTAAGGTA
AGTCAACGTTGAGACAAATATTTTCTTGCGCAACAATTAGGAAACAATTT
GTAAAGCAGTTTCCCCGTGCGACAAGGAGTGTAAACACGTTAAACAGTGT
AAATCCGTTTAGAATGACGTAAACGTAAGCTATAAAAAACTTGATTTCAA
GAGTAAAGAAATTGGGAGTGAGGTAAGTGTGTTCGCGTTTGTTCGTTCTT
ATTGCTGATGACAAACGCGTCAAATTCCTCAGGGTTGGCGGAAACTGCAA
GAGCGAAAAGCTACAGCCCTTCCTTCTGAGGGAGCTTTCTAAAGGACGGA
AAGGTGCGCCTATTGCTCATATGAATGGTTGAGCGGGTTTCCCCGTTTTC
ACCTAAAACATGAAAGGTATTAAAATAGTACATATTTTTGGATATGTAGA
ACAATCTCCATTATATCCCAAACATACAAAATCTGTTCTGAAACGTGAAA
TGCTGATTATTGATACATGACACTAGCTTGAGTTATCGACGTGTGGCATT
TATCCTACGGACCAATACGCTTGAAGTTTCTAGTCATATGCCCAGGACCC
CTTTCGCCTACAGACAAAGACGAAGAAAGTGGGAATTGCGGTTTGGGGGG
CAATCTGCTCGAGTACGTCCAATACTAATTCGCCTAAAATTAAAGTGTCA
GTTGCTTGTTTCTTTGACGCCTATGTCCACCTCCCATATGATATTCTCTT
CGTTGTGAATGGTGTCGACGTCAAGATTCTTGCGGCAAGCTTATGTGGGA
GCTCCGGGAGGAAATGAAAGAATCGAGCAAAAAAATCACCGAGGAGTGGA
AGGTGACAAAATATTATGAAGGAAGATAATTATTTTTCCCATGTGTTCCT
CCATGCGAAAGGACCCCGTGGAGAAAAGAAGTTACATTATCGAGCCCCGG
TCATCACTCACCTCTCGCCGCAAGTAACACGTTCCATCATGGCGTAAACA
CGGCACATCGTGTGTTGTCGCGCGGATGTTTTTATTTTGTCACCTCATGC
CTCCTGTATATATTTTGGTGCATCGTCACCTCGACAGTGGGGTGTCGATG
TCGCCACGGAGGTACCAGACTTAGCCCAAGCTGTCGATGTGGTTGAGCGC
TTGATCGAAGGCCACGCAAGCCAGGATATTGAGGATGCCATCAAAGGAAG
AGACAAGAGGAAGGAGGATGACGATGGCTTTCAGCAGGCGCGCGTAGAGA
TTTAAGTTCATCATTTTGCCTTGCTCGCCTTAGCTGCACGATCTGAACAT
TAGTTGTTTCCTGCGGTGTAGCTTGTCTTGCTACAGGATTTCCGACGTGG
GCAGCCGTTGTCGAAGGTATGATATTACAAAGTATTTGTCGTAAAATCTT
TTAAACGAGTCAAAACAGGAAGAGAAGAAAGCTACAAGCACCTGACAGCG
GCTACAAGACGACCAATATGTATATATCTCAACAGTAGAAGACCTATCTT
ATCTATAGTGTCTCGCTGCAGGTGGGACGAAGCGTTTGCGGCGTCAAAGA
CTGGCTTCGTGGTAAGGCGGCTCTTTATCGGCCGAGGAGGCGCACATCCA
ACACTAGAGGAAGACGATATGTGGATCCTTTGAGCCCCGGAGATGCAGTC
AAAGTAAATGTTGTCGACAAAAATCGGGAACGCAAGCGGCTTGACCAACT
GCGGGCGCTTGGTCGCCGTAGAGAACTTCAGCAAACGACTACTAACCTCG
ACAGCACTCCATCCAACAAAATATCCATAACTGTGGATGACACAAACGTT
TCCTCGTCCGGCTGGGAAGAAGATGTTGCTGACAATCATGATAGTCAAGT
GCGATCGAAGCGCCAATCTGGATTAGACACTGCCGCAGAGAAAGCGATAA
CGTCCTGGAAGTTGTCTGCCTTTGGCAAGGCAGAACCTGCCGAGGGAGAG
GACTGGGAGAGCTTCGAGGAAGAGCATAAGGGTACTGAAGATGTCTCGGA
AGATTGGAGAGCGGATGCCTCAGAAGAAGCATGGAGCGACAGTAAGAGGG
CGGGGTGAATTGGTAGTAATTTAAATCTTAATGCAATGCGCGGGAGACAT
ATGAATCAATCAATCCCTCCTCCGAATATGGACACCTTTGCTCACTGCTA
GCTGTGTTCTTAGTTCCATTCATGCCACTCAATTGCGACGCTGGCGTTTC
GCAGCGAACGTGCCGTCGAGGTAAAGCTTTTCGATCCAACCCCTCTAAGT
ATCGTCTTACAAAACCGTATTCGATGCAATTTTTTTTAGGGATCTAGGTG
AAAGTAGCGAGGCGCTTTTCTTATGCTACTCTCCGTGAATGTCAACGCCA
TGAAACCCAGGAGACGAATCGGACACTTCTCATGAATCGGACGAAACTGT
CGAAGATGGCCAGGTCGATAAGACTCTTATCCACCCCGACCAACCCGTCG
AGTTTTCCACCGATGACCGCACACCTTTAAAGGTGAGCATGTAATTCACG
TTCAAATACGTTCCAGCCTATGATAAGATACGCTTCCGATTTATGGATGG
TCGTGATAACCATATGAACGATGGGGGTCCTCACGGCGTTTTTCACTTCG
AAGCGTATTGTGAATGATTGCCCAAGCACCTGTTTCGTTCCAATCCGCTT
GAGCACATGCTACTCTAAACCAATTCTTCAATCATGTTGTCTGAGTCTTG
ACAGGCGGATCGCATTTCACACATTCCACGTAATCCTTCTTTGATTTCTT
GACGTGGTGTGCAATTGAATGAAACTCTCCTAATTTGTCCACCAGGTAAT
CGAAGACGGGAAGAACCCTTGGCATCTTTCGCGGGATGAGAGATGGACCG
TCTGCCGAAACTGGCAACGGCTTGAAGCACAGCTCTCACGCAGCCGACTG
GCAGATCACATTCAGCAGTGAGGCATTGATGTATGGCAGTAAGGATCACA
TTAACGCCACCCTAGAATGCTCGTTCGATATTTTATCGTCTGAACCGATT
ATGTCATGATTGAGCGGGGCTGCATACGTTAAATATTTTGAAAAGTGGTG
CCAATATTTTCAATGTACCACAGAGTAGACATCCGACACACGACAGCCCT
GAGAAAATACTAAACTTGGATAACTTTTATCAATAGTTACATGCTGTTCG
TAATATCCTCAATACCATGCTTGATATCCTCACGTCAAGTTTCTTCGAGG
TGAAACAGAGACACGACAGCCATAGGACCCAGGGTGATTTAGTCGTGCTG
CAGGAAGCTCAAGTGGTGGGCATGACTACGACTGGAGTCGCCATGAACCA
GGCGCTGGTGGAGGCGTTGAGCGCAAGAATCGTGGTAGTGGAAGAAGCGG
CAGAGGTACATACGCGTGATTGGTACGGCGCAGGATAATCAAAATCCGAT
AACAATCTCGCCTTCCTTGAGGGGATAGCGGCAAACTTGATTTGCTGCAG
CATTCTTTTTGGTGTTCGAAGTTCAAAACAGTAAGCAATGGCCAAAACGT
TTAGAAGGAAATTCCTTCAGCTATGGTCATAACTAGAGATGAAAAACGAG
ATCATGTATTTAATTTTTACAACAAGGACTGTTCTTAACGAACAATATTT
CGTGGCAATAAATAAAAATGTCTTGGGTTCAAACCATAAAATTATCCAAT
TTTTCTTGAATAAAAAACAATTGAACTCATTCCTACCCATCGTATATCAT
ATTATCGCAATTCTTATGTATATATTGAGATGCCGTCCTTGCGCAGCACA
CCCCAGGTGTCACAAGATTAATACTAGTAATAGTAGTAAATTGTATGTTA
GGGTGAGGTAATGAGGAGCGCTGATTGTGCAAGCCGGTTGATGCTCCTGG
GCCCGCTCGCTTAGAATACGGTGTCTCGCCGCTATATAGCAAGGTCGTCT
CATGGGTGGATTTCATTGTGGGAGGTTGGCGGTAGTGTGACTGTTGTTTG
GGGAAGGCTCTAGCCGCTGAGACAGGGTTGACACTGGGGGGCCTTTAATG
GGGGAAATATTTGGTTACTCGGGGCCAACACATTTGCAATGCCACATCAG
GTGCACGCAAGACGAGCTAAAGGCGCTTAACTCGATGCATCGCTTCCCAT
ATATCCCTTAATTACAAACTCCAGGTGATGGAGGCCCATATTCTTGCCGC
CTTGACTCAGGAGACGCAGCAGCTCATCTTGATAGGTGAACTATACACGA
AATAAGTTTTGACCATTGTATTTCGTGCTTTCTGTTACAAGTGGCTTACC
CTGCTTCCTCCCTAGTACGTATGCTCATCATACTTCACATCCTTACCGAG
CATAACGCATCATCCAGCTCATTTTAGTAATGAATGGAGATTTTAGGTAA
ACTTAACGTTTTAGAAGGTCGTTTTTCGCAGTGATGTCGGTTCCGGCGAT
TGGACGCGATTCCGTCCGCGGAATTGTCTCTTTTTGGCAACTAAAATTCC
GGCGTTGAATCAGTATGCTTGATTTTGCGTTTATGCACTACTATACCCTC
AAGACAGTCTCCGAAAAAGGGCAAGTGAAACTCCACAGCCTGTGTGTGCC
GCGCAACCATTTCAAGTTTACATGCGTAAGGCACCTCCGCTGTGGCGCCA
CAAGTGTCGTGTATTCTTGTATGTTCTACGGAGTGTTATATCGTGGAGTG
CTGACGTGGCGTGTCAGTGCACTACTACTTGTTTCTTGAGTTTTGTGTTT
TTATATTGTGTACTCAAATACCAAATACTAGCCGTGTGTGACGGCCTTCA
GCCGTGAGCACAAGAACATTTTTTTTTAATTTTTACAACACAAGCGCTTA
GCCCTCTCCGGCTCTCGTTATCCGGTATCGTTTAACCTTGAGAGTATACA
CGCCCCCCTCACAACTCACAACGGTACACCATCTACCGGCGACAGCACTC
TCCCGCAGAAAACCTAACGATTCGGAGATTTCGAGCACGCATCGCCGATC
TCTACATCTTTACTCTCTTTTAAAATTCTGCGTAGCCTCCTTGAGATCCG
TGGGAAACCGGCAATTCCGGCCGACTGAAAATCGTTCCGGCGAATTCCGG
AATCGCCGGAACCGTCATCACTATTTTTTCGTGGGTCCAGACCTTAGATA
TTGTCTTATACCGAGTTATTTGAACGTCTCCACCCAGGTGACCACCTCCA
GCTCCGTCCCAAGGCAGAGGTTTACAGACTCACGAAAGAGTCAAGGATGG
GATTCGACTTAGACGTGTCAATGTTTGAAAGGGTAAGCATTGCTCAAGCG
TGTGTGTATCTGTTTTGGAGTTCTAAGGTCCAACAAGGTAGGTCAGATGC
CAAAGTACCTTAATGCACAAATATATAGCTCCTAGGTTTTGTAAAGGTTA
TTCTTACGTGAGGCACCCAATTTCTCTTCGCCAGGCTATCGAATGGCTTC
AAAAATGCTTTTGAGTTATGTGTGTACCCAACCCGGCACTAAATTGATGG
TCTCCCCAGGAGCTGATAGCCAGAATGAAGAATTCAGGCATGGTGGTGTA
CGATCATTTTCCTGGCCTTCGCGTTGAGAAGTAAGGCTAAATTTGAAGGA
AAGCCAAAAGCAACAAAACGAATAATATACTGTGAAAAAAATGAAGTATG
CGCCTAATGGTTACAGTCATGCCCACTCTACCCATTAGTGGGTGTGAGAA
AATAGAGGCGTACAATAATTGGTCCGTGGGGTTACCTGAATAGGCTTCAC
CCGTTACTCTAGCTACCTTGAGAACTATTGGCTCAGTGCCGGTGGACTCG
GTGGTAAACGCCATCGGTACGCAATTGTGTGGCGTGATGAAATCGGGATT
GACCCGATGGCGGTCGACGGTAGAGATGGACGCCGTCGCGGAAAACGGGA
GGATAGAGAGGATCCCGTGAGTAAACACCAGATCCTGGGTTGGGAGAATG
AGCAGGCTGACGCGGAACGGGACTGCTGAACCCGTCTCGCGAGACCAAAA
TCTCAGGCGTGAACGAGGACAGGGGAAAAATATTTTCCCTGTTCAGCTGA
CCACGAGTAGAAGGCAAGCCGACTACGGTTGACCTTCTGCTAAATGTGTG
ACGAACAACAACATGCATGTATAACATGACTGGACGCCGTTTGTTTTCCT
TTTGACAGCTGGTAGAAGAGCGGCGCGTCCCCATCTTGGACCTCGCAACC
CAGCGGCGAATGCGCCCGGAAATCGCTGACCTCATCCGCCCCTCGGTGTA
CCCGAACCTGAAAGATGCCCCCCATGTTGAGACCTACCCCAGTGTCAAAG
GAATGCGTCGGCCCGTCTTCTTCTTCGACCACGCAGTGATGGAAGACAAG
TCTGGAACCGTCGCGAGCTCTAAGACGAATAGGTTGTTTTTTCTGTTATT
TTGAGTGAAACAACGAGGGATTGTAAAATTTAGTGCTCTGAATCTCCCGA
ATCGTCCTCATGAGTGGAGTTCCTACTAGTTTTCATTGTCTGAATATGTG
GTCTTCATAGAAACAGTATCGATACTCGTATTGTTTTCGTGAACCCTATC
CGCTAGAATGTGGAATGTCGATAGCTTGAATAGCTTTGGTACCGATGCGA
TTGTGTGTATTATCTTGCCTTCCAGGTACGAAGCGAGGATCATCTCTGGT
CTAGTAAAGTATCTCATCAAGCAGGGCTATACGGAGACAGGGGACATCAC
CGTTCTGACTCCCTATTTAGGGCAGCTGTTTGTACTCAAGGACGTCGTAG
GACACGCCAGCGTTCTAAAAGTCCAGGTATGACCCATCAATCCGTGTATA
TATCACTCAGTCGTCTGGGGAATACCTCCGTATATGGCCGGTGCCGTCGC
TGTGACTCCATCCACAGCCTCAGTGAAAAGCAAGCAAGCAAGCACGCGAA
ATGAACTCGAGCGCCGTGGTCTTGGCAATCGCGTTGACACCTCCTATTCT
TCCTCGAAAGGTGAACGATCGGGACCGCGCGGAGCTGGATGGTATGGATG
ACATCGGGAACAGCGACGACGAGGGGACCAAGGGCGCAGAGCAGTCCAAG
CCCACTGCCACGGTAGAGGTGGCTAATGTCACCGTTAACAGTTTAATCCG
TATGGCCACGGTGGACAAGTGAGTGGATATTTTGTTGGGCAAGTGCTAGA
GGGCCCCACGCTCTCTACCTTGGTCGTGTTATTACGACGGAGCGAAAACT
AGTAAGGACTAATTATGCAATAGCCACCAGACAAGCATGACCTCCGTTCT
TTATGTGAATGATTTTTGTCGCCATCCGGATGCACGCACAGCTTCCAGGG
AGAGGAAAGCAAGATCATCATCATCAGCCTCGTTCGCTCCAACTCCAATT
GTGACATCGGATTCCTACGCTCGTCCAATAGGTTGGTTGAGCATCAAACG
GCCAGCAAGCTATTATATCACTTGCGGTTGCCTCTCTATGTATGAAACGC
ATTATATTGTTCAGAAGATCTCCTGAGCAGGCTGTTGAAAAGCGCTAGGG
TAATATAATCATTTTGACAGCATATATTGAGTGCATCAAGAATACATAGT
TGTGGATATCGATTGTGCTGTTCTATGTGTAATATCATCGCGCCCGCCGA
TTGGGTATTATTTCGTTATCTGGTGTCTACCTATGGCATGTCCGATTTGG
TGTCGGAAGTGCTAGGATAACAAATAGAGCGGGGATTATCCTTGTAAAAC
ACATATTGGCCTACGAAAACCACATAGCGTTTGCGTCCATTACCACAGAC
ATTAACGTAAGTATACTTTCTCTCCTAGGGGCTGATCTTTATACACGTTT
TTACTGGGCGCAGGAGTTACTACGGTTAATTAAGAATTCTTAGGTACAGA
GTAGATTACGGTGAAGTTTGTACTGTAAATTGTTCCCTGGGGATAAAAAA
TCATCCCCCCTACCTTAGAATCTAGCAGGTATAGGGGCTGTCATTCATGA
CATTTTCCCGAGGATCCCCATCGCAAAATATCAGGGCATGTGACTAAACT
TCAACGAGGATGTCAATATTTTCAGTAGCAAAGGGCGTAGCGTGCATACG
ATGCCACTGACCAATCAAAGGACAGGGAACGGATACAAACTACGTTAACA
TACCCGTGTTGAGGTTGGAATTCTAAAAACCAAACGAAATATACTCATCC
CCTGTTTTACGACAAAATAATATTTTTATATAAAGCGCTACGACCGGGAA
TATAACGATGGGATCACCGGAAGGGAACAAAAATATATTCTCCCCGTATA
ATTTGACAAGTTCAATGCCACCTAAACCTCCCCCAGAATCCCGGAATTTG
TCCTGTGTGGTTTTACAGCCATCATTTGATGGCGCTTAGCCGCTGATCGT
CAATACGCCCCTCGGCAAACATCTCACACGTGAATGTATCAGGGTAAACG
TCATGCTATCGAGAGCGCAGCACGGCATGTATATCGTCGGTAACGCCGGT
AAGATGTCAAGGTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig829:293..18907-

>mRNA_H-elongata_contig829.15927.1 ID=mRNA_H-elongata_contig829.15927.1|Name=mRNA_H-elongata_contig829.15927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2694bp|location=Sequence derived from alignment at H-elongata_contig829:293..18907- (Himanthalia elongata Himel1 dioecious)
ATGCCACTCAATTGCGACGCTGGCGTTTCGCAGCGAACGTGCCGTCGAGG
TAAAGCTTTTCGATCCAACCCCTCTAAGTATCATGCCACTCAATTGCGAC
GCTGGCGTTTCGCAGCGAACGTGCCGTCGAGGTAAAGCTTTTCGATCCAA
CCCCTCTAAGTATCGAGACGAATCGGACACTTCTCATGAATCGGACGAAA
CTGTCGAAGATGGCCAGGTCGATAAGACTCTTATCCACCCCGACCAACCC
GTCGAGTTTTCCACCGATGACCGCACACCTTTAAAGGAGACGAATCGGAC
ACTTCTCATGAATCGGACGAAACTGTCGAAGATGGCCAGGTCGATAAGAC
TCTTATCCACCCCGACCAACCCGTCGAGTTTTCCACCGATGACCGCACAC
CTTTAAAGGTAATCGAAGACGGGAAGAACCCTTGGCATCTTTCGCGGGAT
GAGAGATGGACCGTCTGCCGAAACTGGCAACGGCTTGAAGCACAGCTCTC
ACGCAGCCGACTGGCAGATCACATTCAGCAGTAATCGAAGACGGGAAGAA
CCCTTGGCATCTTTCGCGGGATGAGAGATGGACCGTCTGCCGAAACTGGC
AACGGCTTGAAGCACAGCTCTCACGCAGCCGACTGGCAGATCACATTCAG
CATTTCTTCGAGGTGAAACAGAGACACGACAGCCATAGGACCCAGGGTGA
TTTAGTCGTGCTGCAGGAAGCTCAAGTGGTGGGCATGACTACGACTGGAG
TCGCCATGAACCAGGCGCTGGTGGAGGCGTTGAGCGCAAGAATCGTGGTA
GTGGAAGAAGCGGCAGAGTTTCTTCGAGGTGAAACAGAGACACGACAGCC
ATAGGACCCAGGGTGATTTAGTCGTGCTGCAGGAAGCTCAAGTGGTGGGC
ATGACTACGACTGGAGTCGCCATGAACCAGGCGCTGGTGGAGGCGTTGAG
CGCAAGAATCGTGGTAGTGGAAGAAGCGGCAGAGGTGATGGAGGCCCATA
TTCTTGCCGCCTTGACTCAGGAGACGCAGCAGCTCATCTTGATAGGTGAT
GGAGGCCCATATTCTTGCCGCCTTGACTCAGGAGACGCAGCAGCTCATCT
TGATAGGTGACCACCTCCAGCTCCGTCCCAAGGCAGAGGTTTACAGACTC
ACGAAAGAGTCAAGGATGGGATTCGACTTAGACGTGTCAATGTTTGAAAG
GGTGACCACCTCCAGCTCCGTCCCAAGGCAGAGGTTTACAGACTCACGAA
AGAGTCAAGGATGGGATTCGACTTAGACGTGTCAATGTTTGAAAGGCTGG
TAGAAGAGCGGCGCGTCCCCATCTTGGACCTCGCAACCCAGCGGCGAATG
CGCCCGGAAATCGCTGACCTCATCCGCCCCTCGGTGTACCCGAACCTGAA
AGATGCCCCCCATGTTGAGACCTACCCCAGTGTCAAAGGAATGCGTCGGC
CCGTCTTCTTCTTCGACCACGCAGTGATGGAAGACAAGTCTGGAACCGTC
GCGAGCTCTAAGACGAATAGGTTCTGGTAGAAGAGCGGCGCGTCCCCATC
TTGGACCTCGCAACCCAGCGGCGAATGCGCCCGGAAATCGCTGACCTCAT
CCGCCCCTCGGTGTACCCGAACCTGAAAGATGCCCCCCATGTTGAGACCT
ACCCCAGTGTCAAAGGAATGCGTCGGCCCGTCTTCTTCTTCGACCACGCA
GTGATGGAAGACAAGTCTGGAACCGTCGCGAGCTCTAAGACGAATAGGTT
GTACGAAGCGAGGATCATCTCTGGTCTAGTAAAGTATCTCATCAAGCAGG
GCTATACGGAGACAGGGGACATCACCGTTCTGACTCCCTATTTAGGGCAG
CTGTTTGTACTCAAGGACGTCGTAGGACACGCCAGCGTTCTAAAAGTCCA
GGTACGAAGCGAGGATCATCTCTGGTCTAGTAAAGTATCTCATCAAGCAG
GGCTATACGGAGACAGGGGACATCACCGTTCTGACTCCCTATTTAGGGCA
GCTGTTTGTACTCAAGGACGTCGTAGGACACGCCAGCGTTCTAAAAGTCC
AGGTGAACGATCGGGACCGCGCGGAGCTGGATGGTATGGATGACATCGGG
AACAGCGACGACGAGGGGACCAAGGGCGCAGAGCAGTCCAAGCCCACTGC
CACGGTAGAGGTGGCTAATGTCACCGTTAACAGTTTAATCCGTATGGCCA
CGGTGGACAAGTGAACGATCGGGACCGCGCGGAGCTGGATGGTATGGATG
ACATCGGGAACAGCGACGACGAGGGGACCAAGGGCGCAGAGCAGTCCAAG
CCCACTGCCACGGTAGAGGTGGCTAATGTCACCGTTAACAGTTTAATCCG
TATGGCCACGGTGGACAACTTCCAGGGAGAGGAAAGCAAGATCATCATCA
TCAGCCTCGTTCGCTCCAACTCCAATTGTGACATCGGATTCCTACGCTCG
TCCAATAGCTTCCAGGGAGAGGAAAGCAAGATCATCATCATCAGCCTCGT
TCGCTCCAACTCCAATTGTGACATCGGATTCCTACGCTCGTCCAATAGGG
TAAACGTCATGCTATCGAGAGCGCAGCACGGCATGTATATCGTCGGTAAC
GCCGGTAAGATGTCAAGGTGAGGTAAACGTCATGCTATCGAGAGCGCAGC
ACGGCATGTATATCGTCGGTAACGCCGGTAAGATGTCAAGGTGA
back to top