mRNA_H-elongata_contig81375.15798.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: D8LL90_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL90_ECTSI) HSP 1 Score: 261 bits (668), Expect = 6.510e-79 Identity = 132/144 (91.67%), Postives = 139/144 (96.53%), Query Frame = 1
Query: 34 EALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
E AH +GAQFGCSQTAV+A DQQWANSLDVTIEAFSISAHDKTLFKDSPLQ+VHGRKYGLVGPNGAGKSTLLKM+ASGEL IPPRIDCLYVEQEVVADDTPAVIAVMKADKARW+LMEEER+VNRLL+DDPENDKLNDRLQQV
Sbjct: 497 EEAAHRDGAQFGCSQTAVTAGDQQWANSLDVTIEAFSISAHDKTLFKDSPLQIVHGRKYGLVGPNGAGKSTLLKMMASGELKIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWNLMEEERKVNRLLRDDPENDKLNDRLQQV 640
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A835YHL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHL1_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.220e-59 Identity = 110/155 (70.97%), Postives = 127/155 (81.94%), Query Frame = 1
Query: 1 ARRRAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
ARRR A E E AH EGAQF CSQ+AV+ ND W NSLDV I F+ISA +KTLFKDS LQ+VHGRKYGLVGPNGAGKSTLLKMIA+ EL IPPR+DCLYVEQEVVADDTPAV AVMKADK RW+L++EERR++R L+ +P+++ LN RL V
Sbjct: 656 ARRRNVASELAEEAAHREGAQFACSQSAVNENDPTWQNSLDVIIPQFTISAMEKTLFKDSSLQIVHGRKYGLVGPNGAGKSTLLKMIAAKELRIPPRVDCLYVEQEVVADDTPAVQAVMKADKERWALLQEERRLDRALRTNPDDEDLNARLLSV 810
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S1ZRI5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRI5_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.110e-50 Identity = 97/152 (63.82%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 10 RAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
RAA E K A A EGAQF CSQTAV+ ND QW NSLD+ I +F+ISA K LFKDSP + HGR+YGLVGPNG GKSTLLKMIAS +L +PPR+D LYVEQEVVAD+TPAV AV+KAD+ RW+L+EEE+ + + + + E+ K RLQQV
Sbjct: 155 RAAEYEAKAAKASREGAQFACSQTAVNENDPQWMNSLDINIPSFNISAAGKILFKDSPFIISHGRRYGLVGPNGKGKSTLLKMIASNDLKLPPRVDFLYVEQEVVADNTPAVDAVLKADEKRWNLLEEEKELTKAVDEGDEDPKKMARLQQV 306
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S4RAV0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RAV0_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.340e-50 Identity = 97/152 (63.82%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 10 RAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
RAA E K A A EGAQF CSQTAV+ ND QW NSLD+ I +F+ISA K LFKDSP + HGR+YGLVGPNG GKSTLLKMIAS +L +PPR+D LYVEQEVVAD+TPAV AV+KAD+ RW+L+EEE+ + + + + E+ K RLQQV
Sbjct: 540 RAAEYEAKAAKASREGAQFACSQTAVNENDPQWMNSLDINIPSFNISAAGKILFKDSPFIISHGRRYGLVGPNGKGKSTLLKMIASNDLKLPPRVDFLYVEQEVVADNTPAVDAVLKADEKRWNLLEEEKELTKAVDEGDEDPKKMARLQQV 691
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S0GCG2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCG2_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.410e-48 Identity = 91/130 (70.00%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 10 RAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEER 399
RAA E A EGAQF CSQTAV+ ND QW N+LD I +F+ISA K LFKDSPL + HGR+YGLVGPNG GKSTLLKMIAS +L +PPRID LYVEQEVVADDTPAV AV+KADK RW+L+EEE+
Sbjct: 18 RAAEFEAAAVAASAEGAQFACSQTAVNENDPQWQNALDAIIPSFNISAAGKILFKDSPLSIGHGRRYGLVGPNGKGKSTLLKMIASRDLKLPPRIDFLYVEQEVVADDTPAVDAVLKADKKRWNLLEEEK 147
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S3XX63_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX63_HETAK) HSP 1 Score: 175 bits (443), Expect = 1.420e-48 Identity = 87/125 (69.60%), Postives = 101/125 (80.80%), Query Frame = 1
Query: 43 AHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLL 417
A EGAQF CSQ+AV ND W N+LDV + +FSISAH+K LF ++ L +V GRKYG VGPNGAGKSTLLKMIAS EL IPP++DCLYVEQEVVADDTPA AV+KADK RW+L+EEER + R L
Sbjct: 60 ASREGAQFACSQSAVDPNDANWQNALDVIVPSFSISAHNKLLFDNAQLNIVQGRKYGFVGPNGAGKSTLLKMIASKELRIPPKVDCLYVEQEVVADDTPAYEAVLKADKERWALIEEERALTRAL 184
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S2A846_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A846_TRICV) HSP 1 Score: 176 bits (446), Expect = 1.660e-48 Identity = 96/152 (63.16%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 10 RAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
RAA E+ A A EGAQF CSQTAV+ ND QW N LD+ I +F+ISA K LFKD+ V HGR+YGLVGPNG GKSTLLKMIASG+L +PPRID LYVEQEVVAD+TPAV AV+KADK RW L+EEE+ + + E+ K RLQ V
Sbjct: 171 RAAEYEKTAAKASAEGAQFACSQTAVNENDPQWQNQLDINIPSFNISAAGKILFKDAAFNVAHGRRYGLVGPNGKGKSTLLKMIASGDLKLPPRIDFLYVEQEVVADNTPAVDAVLKADKRRWDLLEEEKVLTEAMDAGDESPKKIKRLQDV 322
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S4ID19_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ID19_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.160e-48 Identity = 92/152 (60.53%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 10 RAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
RAA EE A A EGAQF CSQTAV ND QW NSL++ I +F+ISA K LFKD+ V HGR+YGLVGPNG GKSTLLKMIASG++ +PPR+D LYVEQEVVAD+TPAV AV+KADK RW L+EEE+ + + + E+ + +RL+++
Sbjct: 86 RAAEYEESAAKASAEGAQFACSQTAVDENDPQWMNSLNINIPSFNISAAGKILFKDATFNVAHGRRYGLVGPNGKGKSTLLKMIASGDMKMPPRVDFLYVEQEVVADNTPAVDAVLKADKKRWDLLEEEKVLTKAVDKGDEDPRKVNRLREI 237
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S0SRI5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRI5_9STRA) HSP 1 Score: 167 bits (423), Expect = 8.060e-48 Identity = 81/121 (66.94%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 43 AHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRV 405
A +EGAQF SQ+A++ +D QW NSLD+ I + +ISAH+K LF ++ L +VHGR+YGLVGPNGAGKSTLLKMIA GEL IPPR+D LYVEQEV+ADDTPAV AV+KADK RW L++EE+ +
Sbjct: 17 ASIEGAQFAVSQSAINPDDPQWQNSLDIIIPSLNISAHNKELFVNAELHIVHGRRYGLVGPNGAGKSTLLKMIAYGELKIPPRVDYLYVEQEVLADDTPAVDAVLKADKERWLLLQEEKEI 137
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Match: A0A7S1B8B9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8B9_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.150e-47 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 37 ALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISAHDKTLFKDSPLQVVHGRKYGLVGPNGAGKSTLLKMIASGELMIPPRIDCLYVEQEVVADDTPAVIAVMKADKARWSLMEEERRVNRLLKDDPENDKLNDRLQQV 465
A A EGAQF CSQTA +ND W NSLD+ + +F+ISA K LF+D+ L + HGR+YGLVGPNG GKSTLLKMIAS +L++PPRID LYVEQEVVADDTPAV AV+KADK RW+L+EEE+++ + EN + RLQ++
Sbjct: 221 AQASAEGAQFACSQTAFDSNDPTWNNSLDIKVPSFNISAAGKVLFRDATLNISHGRRYGLVGPNGRGKSTLLKMIASRDLVLPPRIDFLYVEQEVVADDTPAVEAVLKADKLRWNLLEEEKKLAAGVDAGDENPRTFARLQEI 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81375.15798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81375.15798.1 >prot_H-elongata_contig81375.15798.1 ID=prot_H-elongata_contig81375.15798.1|Name=mRNA_H-elongata_contig81375.15798.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp ARRRAAAEEEKEALAHLEGAQFGCSQTAVSANDQQWANSLDVTIEAFSISback to top mRNA from alignment at H-elongata_contig81375:435..2431- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81375.15798.1 ID=mRNA_H-elongata_contig81375.15798.1|Name=mRNA_H-elongata_contig81375.15798.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1997bp|location=Sequence derived from alignment at H-elongata_contig81375:435..2431- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81375:435..2431- >mRNA_H-elongata_contig81375.15798.1 ID=mRNA_H-elongata_contig81375.15798.1|Name=mRNA_H-elongata_contig81375.15798.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig81375:435..2431- (Himanthalia elongata Himel1 dioecious)back to top |