mRNA_H-elongata_contig81171.15773.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: D7FIS6_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS6_ECTSI) HSP 1 Score: 106 bits (264), Expect = 5.340e-26 Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 58 MQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
MQG+TF GKSAV RQP+TEEERRGAYRAM ACPT SIR+E +DP + AL DFPFPVD+ERLPG
Sbjct: 1 MQGETFAHKSGKSAVVRQPETEEERRGAYRAMHACPTSSIRVEASDPIARDALKDFPFPVDSERLPG 67
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A835Z392_9STRA (4Fe-4S single cluster domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z392_9STRA) HSP 1 Score: 103 bits (258), Expect = 9.090e-25 Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V NLFVDESCIDCDTCRWM + +S V +QP+ E+ERR AYRAM +CPT SIR+E D K A +DFPFPV E LPG
Sbjct: 58 VEGNLFVDESCIDCDTCRWMAPGIYGRENSQSNVIKQPEGEQERREAYRAMVSCPTGSIRLEQPDALVKDARNDFPFPV--EGLPG 141
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: UPI00053C1A11 (uncharacterized protein LOC104807169 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1A11) HSP 1 Score: 102 bits (255), Expect = 2.450e-24 Identity = 49/86 (56.98%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V +LFVD SCIDCDTCRWM + F V G SAV +QP +EER A +A+ +CPT SIR ET A D FP PVD ERLPG
Sbjct: 64 VDGDLFVDNSCIDCDTCRWMAPEVFTRVDGMSAVIKQPSCKEERLNALQALVSCPTGSIRTETPPTDILRAQDTFPVPVDEERLPG 149
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A1Y1IAW0_KLENI (Metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAW0_KLENI) HSP 1 Score: 99.0 bits (245), Expect = 1.070e-22 Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V + FVD +CIDCDTCRWM +TF + G+SAV RQP+T +ER A +A+ ACPT SIR ET K A + FP +D E LPG
Sbjct: 104 VEGDFFVDHTCIDCDTCRWMAPETFSHLNGQSAVHRQPQTPDERTRALQALLACPTASIRTETPPKDIKDAQNTFPLAIDPETLPG 189
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A835ZBL0_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.480e-22 Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V+ NLFVDESCIDCD CRWM T+ VG +AV +QP TE E +GA RA+ ACPT SIR DP KAA FP V ++L G
Sbjct: 13 VTGNLFVDESCIDCDACRWMAPATYKRVGLGAAVHKQPGTESEVQGALRAVLACPTGSIRSLKGDPRVKAAFTQFPVAVAPDQLKG 98
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A7S0XQ11_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ11_HEMAN) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-22 Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 10 NLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPV 237
N+FVDESCIDC TCRWM F KSAVT QP++EEER GA +AM ACPT SIR E+ DP +K A FP PV
Sbjct: 101 NVFVDESCIDCGTCRWMS-PCFTRSNDKSAVTVQPQSEEERLGALQAMVACPTGSIRTESPDPLSKQATLSFPLPV 175
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A067JL29_JATCU (Lactamase_B domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JL29_JATCU) HSP 1 Score: 95.5 bits (236), Expect = 1.070e-21 Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V + FVD +CIDCDTCRWM F + KSAV +QP T EER A +A+ +CPT+SIR E P A FP P+D +++PG
Sbjct: 44 VEGDFFVDHTCIDCDTCRWMAPQIFTRIDAKSAVFKQPSTNEERLVALQALLSCPTNSIRTEKPAPDVLQAQKTFPMPIDEQKIPG 129
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A7S2WU26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU26_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.240e-21 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 1 VSRNLFVDESCIDCDTCRWMQ----GDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
V+ +LFVD SCIDCDTCRWM G T +GG+S V +QP+++ ER+ AY AM ACPT SIR+ET DP + + FP +D +PG
Sbjct: 46 VAGSLFVDHSCIDCDTCRWMSSTVFGRTKAGLGGQSVVYKQPESDAERKDAYAAMVACPTGSIRLETPDPLMREVIGSFPRLIDPS-MPG 134
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: A0A7S1GTA0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GTA0_HEMAN) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-21 Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 10 NLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPV 237
N+FVDESCIDC TCRWM F KSAVT QP++EEER GA +AM ACPT SIR E+ DP +K A FP PV
Sbjct: 97 NVFVDESCIDCGTCRWMS-PCFTRSNDKSAVTVQPQSEEERLGALQAMVACPTGSIRTESPDPLSKQATLSFPLPV 171
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Match: D7FLY4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLY4_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.600e-21 Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 4 SRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAMFACPTHSIRMETADPATKAALDDFPFPVDAERLPG 258
S + FVDESC+DCD C WM TF G + V QPK+EE+R A++AM ACP SIR+ D AL+ FP PVD ERLPG
Sbjct: 14 SGDFFVDESCVDCDICCWMDPRTFKRSGLGAVVASQPKSEEDRMRAFQAMLACPAGSIRVMRGDRQVIKALESFPLPVDEERLPG 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81171.15773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81171.15773.1 >prot_H-elongata_contig81171.15773.1 ID=prot_H-elongata_contig81171.15773.1|Name=mRNA_H-elongata_contig81171.15773.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp VSRNLFVDESCIDCDTCRWMQGDTFVSVGGKSAVTRQPKTEEERRGAYRAback to top mRNA from alignment at H-elongata_contig81171:348..1105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81171.15773.1 ID=mRNA_H-elongata_contig81171.15773.1|Name=mRNA_H-elongata_contig81171.15773.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=758bp|location=Sequence derived from alignment at H-elongata_contig81171:348..1105- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81171:348..1105- >mRNA_H-elongata_contig81171.15773.1 ID=mRNA_H-elongata_contig81171.15773.1|Name=mRNA_H-elongata_contig81171.15773.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig81171:348..1105- (Himanthalia elongata Himel1 dioecious)back to top |