mRNA_H-elongata_contig80750.15727.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.280e-23 Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
++ LWD L+IG +T+E F TRVYD++P NPVF HYMGSLTTPPCTEGV WIVM++PV
Sbjct: 42 IEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPV 99
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 96.7 bits (239), Expect = 7.680e-23 Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
++ LWD L+IG+ +T+E F TR+YD++P NPVF HYMGSLTTPPCTEGV WIVM++PV
Sbjct: 188 IEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPV 245
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.170e-14 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEP 171
L+P+W+ +++ + EE F Y LLP P F Y GSLTTPPCTEGV WI+M+EP
Sbjct: 193 LEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEP 249
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A0A268TXX1_9HELI (Alpha-carbonic anhydrase domain-containing protein n=1 Tax=Helicobacter sp. 12S02232-10 TaxID=1476197 RepID=A0A268TXX1_9HELI) HSP 1 Score: 66.6 bits (161), Expect = 1.000e-11 Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
L P+W+A+ T + + DL+P F+H+ GSLTTPPCTEGVTWIV+ +P+
Sbjct: 157 LAPIWEAMPEKSGETSYPKKIALQDLIPKKTYFYHFNGSLTTPPCTEGVTWIVLKKPL 214
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A0A432SM83_9PROT (Alpha-carbonic anhydrase domain-containing protein n=1 Tax=Sulfurimonas sp. TaxID=2022749 RepID=A0A432SM83_9PROT) HSP 1 Score: 61.2 bits (147), Expect = 1.470e-10 Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 1
Query: 22 LEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPVII 180
L+ GD ++ DLLP + F+HY+GSLTTPPCT+ V W VM EP+ I
Sbjct: 39 LKEGDRKVSDTITLNAKDLLPTDKGFYHYLGSLTTPPCTQIVEWYVMKEPITI 91
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A0A2S9H170_9BURK (Eukaryotic-type carbonic anhydrase n=1 Tax=Solimicrobium silvestre TaxID=2099400 RepID=A0A2S9H170_9BURK) HSP 1 Score: 63.9 bits (154), Expect = 1.870e-10 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFET-RVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
+Q +W+ + + N T + T +Y +LP N ++ YMGSLTTPPCTEGV W+V EP+
Sbjct: 273 IQTIWNNMPLEKNDTVQPSGTIDMYQILPANRQYYTYMGSLTTPPCTEGVLWVVFKEPI 331
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: UPI0003F5F94C (carbonic anhydrase family protein n=1 Tax=Chitinilyticum aquatile TaxID=362520 RepID=UPI0003F5F94C) HSP 1 Score: 62.8 bits (151), Expect = 2.580e-10 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPVII 180
L+ W L + + ++ +DLLP N +F + GSLTTPPCTEGV W VM EPV +
Sbjct: 150 LKSFWGKLPAKEGTLDDGSSINAFDLLPENHGYFAFSGSLTTPPCTEGVRWQVMKEPVTV 209
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A6QR75_AMPQE (Carbonic anhydrase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A6QR75_AMPQE) HSP 1 Score: 63.2 bits (152), Expect = 2.610e-10 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 25 EIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPVII 180
++ NS E+ + ++YD LP N ++ Y GSLTTPPCTE V WIVM P+++
Sbjct: 190 QVAYNSEEQVQDVKLYDYLPENKDYYLYAGSLTTPPCTEAVQWIVMKNPIVV 241
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A0A545SIA0_9GAMM (Carbonic anhydrase n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A545SIA0_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 3.160e-10 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 1 LQPLWDAL--EIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
L P+W + E+G E LLP P ++ Y GSLTTPPC+EGVTW++M EP+
Sbjct: 110 LAPIWANMPTELGKEKAVEGVTASAKALLPSKPEYYRYSGSLTTPPCSEGVTWLLMTEPL 169
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Match: A0A3S2XTQ9_9BURK (Carbonate dehydratase n=2 Tax=Inhella crocodyli TaxID=2499851 RepID=A0A3S2XTQ9_9BURK) HSP 1 Score: 62.8 bits (151), Expect = 3.640e-10 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 LQPLWDALEIGDNSTEESFETR-VYDLLPPNPVFFHYMGSLTTPPCTEGVTWIVMNEPV 174
+Q +W+ L + T++ + LLP +P +F YMGSLTTPPCTEGV W+VM +PV
Sbjct: 192 VQQVWNHLPLEKGDTQKGLVPMDLSALLPSDPAYFTYMGSLTTPPCTEGVLWLVMRQPV 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80750.15727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80750.15727.1 >prot_H-elongata_contig80750.15727.1 ID=prot_H-elongata_contig80750.15727.1|Name=mRNA_H-elongata_contig80750.15727.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp LQPLWDALEIGDNSTEESFETRVYDLLPPNPVFFHYMGSLTTPPCTEGVTback to top mRNA from alignment at H-elongata_contig80750:966..1379- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80750.15727.1 ID=mRNA_H-elongata_contig80750.15727.1|Name=mRNA_H-elongata_contig80750.15727.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=414bp|location=Sequence derived from alignment at H-elongata_contig80750:966..1379- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80750:966..1379- >mRNA_H-elongata_contig80750.15727.1 ID=mRNA_H-elongata_contig80750.15727.1|Name=mRNA_H-elongata_contig80750.15727.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=360bp|location=Sequence derived from alignment at H-elongata_contig80750:966..1379- (Himanthalia elongata Himel1 dioecious)back to top |