mRNA_H-elongata_contig80577.15708.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig80577.15708.1
Unique Name	mRNA_H-elongata_contig80577.15708.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A6H5JST0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST0_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 7.210e-100
Identity = 153/174 (87.93%), Postives = 165/174 (94.83%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKERLR 522
            GSPNYAAPEVIMGTLY GPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIK+GMYSLPSHL  LTRDL+PRMLVVDPMKRITI++IK+HPWF Q+IPLYLTLTPAQLE+QA +VDE+VV ML KLPFKGITR+RIL ALAHKGYKKKGEFEHELRVVYEL+QGNKLHK RL+
Sbjct:  170 GSPNYAAPEVIMGTLYAGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKSGMYSLPSHLGALTRDLVPRMLVVDPMKRITIAEIKQHPWFQQSIPLYLTLTPAQLEDQASKVDEDVVAMLCKLPFKGITRERILLALAHKGYKKKGEFEHELRVVYELLQGNKLHKARLK 343

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A836C9Y0_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y0_9STRA)

HSP 1 Score: 250 bits (639), Expect = 4.610e-77
Identity = 128/179 (71.51%), Postives = 146/179 (81.56%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPF-KGITRDRILHALAHK-----GYKKKGEFEHELRVVYELVQGNKLHKERL 519
            GSPNYAAPEVIMG LY GPEVDVWSCGVILYALLCG+LPFDDESIP+LFKKI++GMYSLPSHL PLTRDLIPRMLVVDPMKRITI +I+ HPWFLQ++P YLTLTP QLE QA R+DEEV+ +++KLP   G+TR RI  A+ H+     G    G F  +LRV YEL+ GNK  KERL
Sbjct:  170 GSPNYAAPEVIMGNLYAGPEVDVWSCGVILYALLCGNLPFDDESIPALFKKIRSGMYSLPSHLLPLTRDLIPRMLVVDPMKRITIPEIRTHPWFLQSLPAYLTLTPKQLEAQAGRLDEEVLDLMLKLPLGAGVTRARIAQAVMHRNAGGGGANGGGRFLAQLRVAYELLLGNKHTKERL 348

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A7S2GBF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBF2_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.930e-66
Identity = 107/170 (62.94%), Postives = 127/170 (74.71%), Query Frame = 1

Query:    7 PNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKER 516
            PNYAAPEVI G LY GPEVDVWSCGVILYALLCGSLPFDDESIP+LFKKIK+GMYSLPSHLS L+RDLIPRMLVVDPMKRITI +I++HPWF   +P YL  TP  LE+Q   +D E V+ +  +P    TR R+  ++ HK  +       ELRV YEL+  +K  ++R
Sbjct:    1 PNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGSLPFDDESIPNLFKKIKSGMYSLPSHLSSLSRDLIPRMLVVDPMKRITIPEIRQHPWFQHKLPQYLHFTPDMLEQQEKVLDLETVEEVCAIPRLNATRQRVEASVMHKTGRA------ELRVCYELILDSKRSRQR 164

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A6G0WDC3_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WDC3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 7.700e-66
Identity = 110/173 (63.58%), Postives = 132/173 (76.30%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKERL 519
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCG+LPFDDESIP+LFKKI+ GMYSLPSHLS   RDLIPRMLVVDPMKRITI +I++HPWF  N+P YL   P  LE++A ++DEEVV   +   F GI+R++I+H++ +K Y         LRV Y+LV  +K  K R+
Sbjct:  171 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGALPFDDESIPNLFKKIRGGMYSLPSHLSEDARDLIPRMLVVDPMKRITIPEIRQHPWFQTNLPPYLQHPPESLEQEARKIDEEVVNQCLTFNFPGISREKIVHSVMNKEYTP-------LRVAYDLVLDHKNAKIRI 336

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A7R9YEF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEF8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.100e-65
Identity = 102/163 (62.58%), Postives = 127/163 (77.91%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGIT-RDRILHALAHKGYKKKGEFEHELRVVYEL 486
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCGSLPFDDESIP+LF+KIK+GMYSLPSHLS L  DLIP+MLVVDP+KRITI DI++HPWFL N+P+YL+  P  +E++   +DE ++  +  LPFKG   R++ + A+  +  +K      +L+V YEL
Sbjct:   12 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGSLPFDDESIPNLFRKIKSGMYSLPSHLSTLAHDLIPKMLVVDPLKRITIPDIRQHPWFLHNLPMYLSHPPEAIEKRERHLDEGILNKVCSLPFKGSNLREKTIEAVLRRRVRK------DLQVAYEL 168

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: W4FVS7_9STRA (Non-specific serine/threonine protein kinase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVS7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.280e-65
Identity = 110/175 (62.86%), Postives = 132/175 (75.43%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKG--ITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKERL 519
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCG+LPFDDESIP+LFKKI+ GMYSLPSHLS   RDLIPRMLVVDPMKRITI +I++HPWF  N+P YL   P  +E++A ++D+EVV   + L F G  ITRD ++H++ H+ Y         LRV Y+LV  +K  K R+
Sbjct:  172 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGALPFDDESIPNLFKKIRGGMYSLPSHLSDDARDLIPRMLVVDPMKRITIPEIRQHPWFQTNLPPYLQHPPEAVEQEARKIDDEVVAKCLTLDFPGGTITRDHVIHSIEHEEYTP-------LRVAYDLVLDHKNAKMRI 339

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A1V9ZHT8_9STRA (SNF1-related protein kinase catalytic subunit alpha (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHT8_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.580e-64
Identity = 110/174 (63.22%), Postives = 126/174 (72.41%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEH-ELRVVYELVQGNKLHKERL 519
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCG+LPFDDESIP+LFKKI+ GMYSLPSHLS   RDLIPRMLVVDPMKRITI +I+ HPWF  N+P YL   P  LE  AL +DE+VV   + L F G+T D I+  + +K        EH  LRV Y L+  +K  K R+
Sbjct:  171 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGALPFDDESIPNLFKKIRGGMYSLPSHLSEHARDLIPRMLVVDPMKRITIPEIRNHPWFQTNLPPYLQQPPEALEHVALALDEDVVNQCLALNFPGVTHDGIVQCVVNK--------EHGPLRVAYNLMLDHKNAKLRI 336

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: W7TMX0_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMX0_9STRA)

HSP 1 Score: 218 bits (554), Expect = 9.590e-64
Identity = 105/172 (61.05%), Postives = 131/172 (76.16%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKER 516
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCGSLPFDDESIP+LFKKIK+GMY+LPSHLS L RDLIPRMLVVDPMKRITI +I+ HPW+   +P YL L P  +E+Q   +DE+ ++ +   PF+G+T  R+L A+  +  +      H+L+V YE++  +K  K+R
Sbjct:  170 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGSLPFDDESIPNLFKKIKSGMYTLPSHLSQLARDLIPRMLVVDPMKRITIPEIRLHPWYQHKLPGYLRLPPELMEKQERVIDEDCIRAVCSYPFRGVTWQRVLDAIQRRNQR------HDLKVAYEIILDHKQAKQR 335

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: F0W7F9_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7F9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 9.510e-63
Identity = 105/173 (60.69%), Postives = 131/173 (75.72%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKGEFEHELRVVYELVQGNKLHKERL 519
            GSPNYAAPEVI G+LY GPEVDVWSCGVILYALLCGSLPFDDESIP+LFKKI+ GMYSLPSHLS   RDLIPRMLVVDPMKRITI +I++HPWF  ++P YL   P  +E +++++D+EVV   ++L F GITRD+++  +       + +     RVVY+L   +K  K R+
Sbjct:   90 GSPNYAAPEVISGSLYAGPEVDVWSCGVILYALLCGSLPFDDESIPNLFKKIRGGMYSLPSHLSEYARDLIPRMLVVDPMKRITIPEIRQHPWFQMDLPPYLRTPPEMIENESVKIDQEVVNQCLQLDFPGITRDKLIQVI-------RNQESSPFRVVYDLTLDHKNAKIRI 255

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BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Match: A0A7S1UFG3_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFG3_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.350e-62
Identity = 104/163 (63.80%), Postives = 125/163 (76.69%), Query Frame = 1

Query:    1 GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFKKIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPLYLTLTPAQLEEQALRVDEEVVQMLIKLPFKGIT-RDRILHALAHKGYKKKGEFEHELRVVYEL 486
            GSPNYAAPEVI G LY GPEVDVWSCGVILYALLCGSLPFDDESIP+LF+KIK+GMYSLPSHLS L  DLIP+MLVVDP+KRITI +I+ HPWF  N+P YL   P Q+E++  R+DEE ++ +  LPFKG   RD+ + A+  +  +K      +L V YEL
Sbjct:  171 GSPNYAAPEVISGNLYAGPEVDVWSCGVILYALLCGSLPFDDESIPNLFRKIKSGMYSLPSHLSSLAHDLIPKMLVVDPLKRITIPEIRMHPWFTHNLPSYLAHPPGQMEKRERRLDEEPLEKVCALPFKGTNLRDKAIDAVLRRNRRK------DLLVAYEL 327

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot

BLAST of mRNA_H-elongata_contig80577.15708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JST0_9PHAE	7.210e-100	87.93	Protein kinase domain-containing protein n=2 Tax=E...	[more]
A0A836C9Y0_9STRA	4.610e-77	71.51	Non-specific serine/threonine protein kinase n=1 T...	[more]
A0A7S2GBF2_9STRA	5.930e-66	62.94	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A6G0WDC3_9STRA	7.700e-66	63.58	Non-specific serine/threonine protein kinase n=2 T...	[more]
A0A7R9YEF8_9STRA	6.100e-65	62.58	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
W4FVS7_9STRA	7.280e-65	62.86	Non-specific serine/threonine protein kinase n=3 T...	[more]
A0A1V9ZHT8_9STRA	2.580e-64	63.22	SNF1-related protein kinase catalytic subunit alph...	[more]
W7TMX0_9STRA	9.590e-64	61.05	Non-specific serine/threonine protein kinase (Frag...	[more]
F0W7F9_9STRA	9.510e-63	60.69	Non-specific serine/threonine protein kinase n=2 T...	[more]
A0A7S1UFG3_9STRA	1.350e-62	63.80	Non-specific serine/threonine protein kinase n=1 T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig80577	contig	H-elongata_contig80577:1140..2387 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	316.6
Seed ortholog evalue	7.1e-84
Seed eggNOG ortholog	2880.D7G746
Preferred name	PRKAA2
KEGG ko	ko:K07198,ko:K12761,ko:K21989
KEGG Pathway	ko04068,ko04113,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04113,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
GOs	GO:0000003,GO:0000075,GO:0000077,GO:0000082,GO:0000086,GO:0000166,GO:0000187,GO:0000226,GO:0000278,GO:0000302,GO:0000307,GO:0000322,GO:0000323,GO:0000324,GO:0000902,GO:0000904,GO:0001101,GO:0001302,GO:0001403,GO:0001558,GO:0001666,GO:0001678,GO:0001932,GO:0001934,GO:0002791,GO:0002792,GO:0002793,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0004690,GO:0004691,GO:0004693,GO:0004703,GO:0004712,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0005996,GO:0006006,GO:0006082,GO:0006109,GO:0006110,GO:0006111,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006259,GO:0006260,GO:0006325,GO:0006355,GO:0006417,GO:0006464,GO:0006468,GO:0006629,GO:0006631,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006950,GO:0006974,GO:0006977,GO:0006979,GO:0006986,GO:0006995,GO:0006996,GO:0007005,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007093,GO:0007098,GO:0007099,GO:0007124,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0007548,GO:0007568,GO:0007569,GO:0007584,GO:0007610,GO:0008022,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0008340,GO:0008361,GO:0008406,GO:0008610,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009272,GO:0009311,GO:0009313,GO:0009314,GO:0009409,GO:0009410,GO:0009411,GO:0009416,GO:0009453,GO:0009593,GO:0009594,GO:0009605,GO:0009628,GO:0009631,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009743,GO:0009746,GO:0009749,GO:0009755,GO:0009756,GO:0009791,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010050,GO:0010150,GO:0010182,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010389,GO:0010468,GO:0010494,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010769,GO:0010770,GO:0010821,GO:0010822,GO:0010827,GO:0010828,GO:0010829,GO:0010876,GO:0010893,GO:0010906,GO:0010907,GO:0010941,GO:0010948,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0014074,GO:0014823,GO:0014850,GO:0015030,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016052,GO:0016202,GO:0016236,GO:0016239,GO:0016241,GO:0016301,GO:0016310,GO:0016324,GO:0016358,GO:0016569,GO:0016570,GO:0016572,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0017148,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019207,GO:0019209,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019395,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019722,GO:0019725,GO:0019752,GO:0019887,GO:0019899,GO:0019900,GO:0019904,GO:0019915,GO:0019932,GO:0019954,GO:0022008,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030258,GO:0030295,GO:0030330,GO:0030332,GO:0030424,GO:0030425,GO:0030447,GO:0030554,GO:0030674,GO:0030730,GO:0030808,GO:0030810,GO:0030811,GO:0030813,GO:0031000,GO:0031023,GO:0031156,GO:0031175,GO:0031285,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031505,GO:0031570,GO:0031571,GO:0031588,GO:0031593,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033157,GO:0033500,GO:0033554,GO:0033674,GO:0033993,GO:0034248,GO:0034249,GO:0034284,GO:0034440,GO:0034599,GO:0034614,GO:0034641,GO:0034645,GO:0034654,GO:0034694,GO:0034695,GO:0034762,GO:0034763,GO:0034764,GO:0035088,GO:0035173,GO:0035174,GO:0035262,GO:0035404,GO:0035556,GO:0035639,GO:0035690,GO:0035770,GO:0035966,GO:0036094,GO:0036211,GO:0036267,GO:0036270,GO:0036279,GO:0036293,GO:0036294,GO:0036464,GO:0036477,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042149,GO:0042221,GO:0042304,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042493,GO:0042542,GO:0042546,GO:0042556,GO:0042557,GO:0042592,GO:0042593,GO:0042594,GO:0042595,GO:0042710,GO:0042752,GO:0042770,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043279,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043467,GO:0043470,GO:0043549,GO:0043562,GO:0043900,GO:0043933,GO:0044010,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044271,GO:0044275,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044839,GO:0044843,GO:0045137,GO:0045177,GO:0045178,GO:0045197,GO:0045229,GO:0045471,GO:0045540,GO:0045542,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045722,GO:0045786,GO:0045787,GO:0045792,GO:0045821,GO:0045833,GO:0045834,GO:0045844,GO:0045859,GO:0045860,GO:0045893,GO:0045913,GO:0045923,GO:0045927,GO:0045930,GO:0045935,GO:0045937,GO:0045940,GO:0045981,GO:0046015,GO:0046034,GO:0046317,GO:0046318,GO:0046320,GO:0046321,GO:0046324,GO:0046325,GO:0046326,GO:0046352,GO:0046390,GO:0046483,GO:0046677,GO:0046777,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046889,GO:0046890,GO:0046956,GO:0048364,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048827,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0048878,GO:0050708,GO:0050709,GO:0050714,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050810,GO:0050896,GO:0050920,GO:0050921,GO:0050994,GO:0050995,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051055,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051222,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051270,GO:0051272,GO:0051276,GO:0051291,GO:0051298,GO:0051321,GO:0051338,GO:0051347,GO:0051493,GO:0051592,GO:0051606,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0052128,GO:0055081,GO:0055082,GO:0055086,GO:0055088,GO:0055089,GO:0055114,GO:0060090,GO:0060176,GO:0060249,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0060627,GO:0060968,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061245,GO:0061458,GO:0061695,GO:0061744,GO:0061762,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0070201,GO:0070301,GO:0070482,GO:0070507,GO:0070542,GO:0070726,GO:0070783,GO:0070887,GO:0070925,GO:0071156,GO:0071158,GO:0071215,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071277,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071361,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071417,GO:0071453,GO:0071456,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071731,GO:0071732,GO:0071840,GO:0071852,GO:0071900,GO:0071902,GO:0071940,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072521,GO:0072522,GO:0080022,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090043,GO:0090066,GO:0090068,GO:0090087,GO:0090153,GO:0090155,GO:0090181,GO:0090205,GO:0090304,GO:0090311,GO:0090316,GO:0090407,GO:0090604,GO:0090606,GO:0090693,GO:0097009,GO:0097124,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0097366,GO:0097367,GO:0097447,GO:0097458,GO:0097472,GO:0097574,GO:0097708,GO:0098534,GO:0098590,GO:0098772,GO:0099004,GO:0099402,GO:0106118,GO:0106120,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140030,GO:0140096,GO:1900060,GO:1900076,GO:1900077,GO:1900371,GO:1900373,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901261,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901563,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901861,GO:1901863,GO:1901983,GO:1901985,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902170,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902554,GO:1902667,GO:1902669,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902911,GO:1902930,GO:1902932,GO:1903047,GO:1903108,GO:1903109,GO:1903214,GO:1903432,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903532,GO:1903533,GO:1903578,GO:1903580,GO:1903664,GO:1903665,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1903955,GO:1904262,GO:1904428,GO:1904950,GO:1904951,GO:1905038,GO:1990234,GO:1990794,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000241,GO:2000303,GO:2000756,GO:2000758,GO:2000765,GO:2000766,GO:2001141,GO:2001169,GO:2001171,GO:2001273,GO:2001274
EggNOG free text desc.	protein serine/threonine kinase activity
EggNOG OGs	KOG0583@1,KOG0583@2759
Ec32 ortholog description	SNF1-related protein kinase
Ec32 ortholog	Ec-01_011080.1
EC	2.7.11.1,2.7.11.11
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01001,ko02000,ko03029,ko04131
Hectar predicted targeting category	other localisation
Exons	2
Model size	522
Cds size	522
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931211.2401748-CDS-H-elongata_contig80577:1139..1304	1622931211.2401748-CDS-H-elongata_contig80577:1139..1304	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80577 1140..1304 -
1691679743.320819-CDS-H-elongata_contig80577:1139..1304	1691679743.320819-CDS-H-elongata_contig80577:1139..1304	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80577 1140..1304 -
1622931211.260992-CDS-H-elongata_contig80577:2030..2387	1622931211.260992-CDS-H-elongata_contig80577:2030..2387	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80577 2031..2387 -
1691679743.3342934-CDS-H-elongata_contig80577:2030..2387	1691679743.3342934-CDS-H-elongata_contig80577:2030..2387	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig80577 2031..2387 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig80577.15708.1	prot_H-elongata_contig80577.15708.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig80577 1140..2387 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig80577:1140..2387-
coding sequence from alignment at H-elongata_contig80577:1140..2387-

protein sequence of mRNA_H-elongata_contig80577.15708.1

>prot_H-elongata_contig80577.15708.1 ID=prot_H-elongata_contig80577.15708.1|Name=mRNA_H-elongata_contig80577.15708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
GSPNYAAPEVIMGTLYGGPEVDVWSCGVILYALLCGSLPFDDESIPSLFK
KIKAGMYSLPSHLSPLTRDLIPRMLVVDPMKRITISDIKRHPWFLQNIPL
YLTLTPAQLEEQALRVDEEVVQMLIKLPFKGITRDRILHALAHKGYKKKG
EFEHELRVVYELVQGNKLHKERLR

mRNA from alignment at H-elongata_contig80577:1140..2387-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig80577.15708.1 ID=mRNA_H-elongata_contig80577.15708.1|Name=mRNA_H-elongata_contig80577.15708.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1248bp|location=Sequence derived from alignment at H-elongata_contig80577:1140..2387- (Himanthalia elongata Himel1 dioecious)
GGCTCTCCGAATTACGCCGCTCCGGAGGTGATCATGGGCACGCTGTACGG
GGGGCCAGAGGTGGACGTTTGGTCCTGCGGCGTAATCCTGTATGCGTTGC
TGTGCGGGAGCCTGCCGTTTGATGACGAGAGTATTCCGTCTCTTTTCAAG
AAAATCAAGGCCGGGATGTACTCGCTGCCGAGCCACCTGAGCCCCCTGAC
GAGGGACCTCATTCCGCGGATGCTCGTGGTCGACCCTATGAAGCGCATCA
CTATCTCGGACATCAAACGGCACCCGTGGTTTTTGCAGAACATTCCGCTC
TACCTCACGCTGACACCGGCACAGCTCGAGGAGCAGGCCTTGAGGGTAGA
CGAAGAGGTGGGTGGTCAGGTTGCGAGAATGGGGGCGGGGGGGGGGGGGA
CTCATGGTCCGAAGTTAATGGGCATCGTGCGGTATGTTTCCGGCGCCGTC
CTCCCCCACCCTGACCCNNNNNNNNNNCCCCCGCCCCGCCGCCGGGGGGG
GCGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATCATGGTA
CGAAGTTAATGGGCATCGTGCCGTATGTTTCCCGCGCCGTCCTCCCACAC
CCTGATCCCGATATACGAGAGCTAAACTTAACGTTATAATCAGCTGTTCT
GTTATCCAAACTCAACAAAAAGGCGTGACAGGCTTGGGCTCCAAAGCAGA
GCAAACCTAAGAGCTTAAATATATGCGAAGTATATATATATATATATATA
CTGGTATAAAGAGGGGATGTCGGTGTTGCTTACCCCGCGGTCAAGGCGTA
TCCCGCGCTCTCTTGAATTGGTTCTTAATGTCAAGGAGGAGACGAGAAGG
GTTCCCCAAGGCGCACAAGATTGCAAGCTCTACAGGGGGAAGTAGGAATG
GTTAGACGAGGGGGGAGGGGGGGTAATGCTCACGTTCACTCGATCGGCTT
GTGGCGAGGCCGTCTGTGTCATTCATTTGGTTATTCTGTTGGTTCTTAAC
GTGGCCTTGGTCTTTGTCGTTCCTCTCGGATAGGTGGTGCAAATGCTGAT
CAAGCTACCGTTTAAGGGGATCACGAGGGATCGAATACTGCACGCCTTGG
CACACAAGGGGTACAAGAAAAAGGGGGAGTTCGAGCACGAGCTGCGGGTG
GTTTACGAACTGGTTCAAGGGAACAAGCTTCACAAGGAGCGTCTGAGG

Coding sequence (CDS) from alignment at H-elongata_contig80577:1140..2387-

>mRNA_H-elongata_contig80577.15708.1 ID=mRNA_H-elongata_contig80577.15708.1|Name=mRNA_H-elongata_contig80577.15708.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at H-elongata_contig80577:1140..2387- (Himanthalia elongata Himel1 dioecious)
GGCTCTCCGAATTACGCCGCTCCGGAGGTGATCATGGGCACGCTGTACGG
GGGGCCAGAGGTGGACGTTTGGTCCTGCGGCGTAATCCTGTATGCGTTGC
TGTGCGGGAGCCTGCCGTTTGATGACGAGAGTATTCCGTCTCTTTTCAAG
AAAATCAAGGCCGGGATGTACTCGCTGCCGAGCCACCTGAGCCCCCTGAC
GAGGGACCTCATTCCGCGGATGCTCGTGGTCGACCCTATGAAGCGCATCA
CTATCTCGGACATCAAACGGCACCCGTGGTTTTTGCAGAACATTCCGCTC
TACCTCACGCTGACACCGGCACAGCTCGAGGAGCAGGCCTTGAGGGTAGA
CGAAGAGGGCTCTCCGAATTACGCCGCTCCGGAGGTGATCATGGGCACGC
TGTACGGGGGGCCAGAGGTGGACGTTTGGTCCTGCGGCGTAATCCTGTAT
GCGTTGCTGTGCGGGAGCCTGCCGTTTGATGACGAGAGTATTCCGTCTCT
TTTCAAGAAAATCAAGGCCGGGATGTACTCGCTGCCGAGCCACCTGAGCC
CCCTGACGAGGGACCTCATTCCGCGGATGCTCGTGGTCGACCCTATGAAG
CGCATCACTATCTCGGACATCAAACGGCACCCGTGGTTTTTGCAGAACAT
TCCGCTCTACCTCACGCTGACACCGGCACAGCTCGAGGAGCAGGCCTTGA
GGGTAGACGAAGAGGTGGTGCAAATGCTGATCAAGCTACCGTTTAAGGGG
ATCACGAGGGATCGAATACTGCACGCCTTGGCACACAAGGGGTACAAGAA
AAAGGGGGAGTTCGAGCACGAGCTGCGGGTGGTTTACGAACTGGTTCAAG
GGAACAAGCTTCACAAGGAGCGTCTGAGGGTGGTGCAAATGCTGATCAAG
CTACCGTTTAAGGGGATCACGAGGGATCGAATACTGCACGCCTTGGCACA
CAAGGGGTACAAGAAAAAGGGGGAGTTCGAGCACGAGCTGCGGGTGGTTT
ACGAACTGGTTCAAGGGAACAAGCTTCACAAGGAGCGTCTGAGG