mRNA_H-elongata_contig78113.15481.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: D8LP29_ECTSI (Glycosyltransferase, family GT49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP29_ECTSI) HSP 1 Score: 103 bits (258), Expect = 6.950e-25 Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 160 MLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQALH 324
M+IS+T AQ+PEELDPVWYPVNRLRNVAV+AV T+HFLMTDIDIWPDVNAY ALH
Sbjct: 1 MVISATAAQSPEELDPVWYPVNRLRNVAVKAVKTSHFLMTDIDIWPDVNAYSALH 55
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: B7G485_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G485_PHATC) HSP 1 Score: 85.9 bits (211), Expect = 2.480e-17 Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRW--PGPISIAILEEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
+ Q SQ+R WM+ C+RW P+SIA+ V LVA G PE+L S + ST A + YPVN LRN+A RAVTTTH + D+D WP + + L
Sbjct: 158 VTQLSQDRLWMMEHHCQRWGPSHPMSIAVFTNQTVAEVRSQLVALGCAPEQLASVQTLPSTAAAVSD------YPVNVLRNLAFRAVTTTHIVYVDVDFWPSADLHATL 260
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A7S3K145_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K145_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.230e-16 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAIL-EEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQALH 324
+ Q + R WML F+C+RW GPI IA+ ++ +E+ ++ G + ++ S A D YPVNRLRN+A++ V T+HFL+ DID+WPD Y+ LH
Sbjct: 151 VTQATTERLWMLKFICRRWSGPIVIAVYSQQGKEIPNLEKFCPGGQVHYQIIS--------AAKEIFSDATKYPVNRLRNLALKHVQTSHFLLHDIDLWPDSTLYKRLH 251
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A8J5XX44_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX44_DIALT) HSP 1 Score: 83.2 bits (204), Expect = 2.210e-16 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAILEEDREVRVVKW------LVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
++QTS+ R WM+ LC RW GP++I++ +V+ L ACG+ E R+ + R + E YP+N+LRN+A+ VTTTH L+ DID+WP Y L
Sbjct: 208 VSQTSEERIWMIEHLCDRWAGPLAISVHVRGSPHKVMAVHQRADRLAACGSTSGE--PRLTLEVLRGKKEEA-----YPINKLRNLAISRVTTTHMLLVDIDLWPSAELYAVL 313
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A1Z5JVV1_FISSO (Glycosyltransferase-like protein LARGE n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVV1_FISSO) HSP 1 Score: 82.8 bits (203), Expect = 2.790e-16 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAILEEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQALH 324
+ QTS++R WML + C+RWPGPIS+A+ + VK + C SR+ I + EE YPVN LRN A+RAV T+H + DID W + Y LH
Sbjct: 136 VTQTSEDRLWMLQYHCQRWPGPISLAVFT-PLPLSEVKEQIHCSN-----SSRLTIQLVSGYSEEE-----YPVNVLRNTALRAVQTSHVVYVDIDFWAATDLYDLLH 232
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A1Z5KR38_FISSO (Glycosyltransferase-like protein LARGE n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR38_FISSO) HSP 1 Score: 80.9 bits (198), Expect = 1.380e-15 Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAILEEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
+ QTS++R WML + C+RWPGPISIAI + +++ + + SR+ + + EE YPVN LRN A+RAV TTH + DID W + Y +L
Sbjct: 149 VTQTSEDRLWMLQYHCQRWPGPISIAIYTQLPLLQIQDQIHCANS------SRLTLQLVSGYSEEE-----YPVNVLRNTALRAVQTTHVVYVDIDFWTATDLYDSL 244
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A196SG44_BLAHN (Glycosyltransferase-like protein LARGE1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SG44_BLAHN) HSP 1 Score: 79.3 bits (194), Expect = 3.180e-15 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIA-ILEEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
++ TS R + LPFL RW GP+S+A IL E + +A LP SR+ I P E YP NRLRN+A++ +T++HF + D+D+WP NAY AL
Sbjct: 55 LSHTSVQRLFFLPFLLDRWGGPLSLAVILASSEEESFLDQFLAEHPLP----SRLTICRFLTSKPSE-----YPYNRLRNIAMKHITSSHFWVMDMDMWPSDNAYNAL 153
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A7S0J5T3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5T3_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 6.350e-15 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAI-LEEDREVRVV-KWLVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
++QTS++R WM+ L KRW G ISIA+ + ++E+++ K L G P I R + + YP+N LRNVA++AV T+HFL++DID+WP V++Y +
Sbjct: 157 VSQTSEDRVWMVEHLVKRWGGAISIAVYVVTEKEIKLHRKRLAKIGRQPGSS-----IIEVRGRLSDG-----YPINALRNVALKAVRTSHFLLSDIDLWPSVDSYNEI 255
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A196SE66_BLAHN (Glycosyltransferase-like protein LARGE1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SE66_BLAHN) HSP 1 Score: 79.0 bits (193), Expect = 6.740e-15 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 4 AQTSQNRFWMLPFLCKRWPGPISIAILEEDREVRVVKWLVACGTLPEELCSRMLISSTRAQTPEEL----DPVW------YPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
+QTS R + L +L KRWPGP+SIA+ E+R + + P L + I +++ W YP+NRLRN+A+ V T+HF++ D+D+WP + Y AL
Sbjct: 196 SQTSTQRLFYLEYLLKRWPGPMSIAVFVHQHELRQTEKFIRRSHFPARLHLLLYIVDVKSEGDRVCRNNGKQSWCYAQSVYPINRLRNIAIADVATSHFILFDMDVWPSHDTYAAL 311
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Match: A0A4D9CQX5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQX5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.430e-14 Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 1 IAQTSQNRFWMLPFLCKRWPGPISIAIL------EEDREVRVVKW--LVACGTLPEELCSRMLISSTRAQTPEELDPVWYPVNRLRNVAVRAVTTTHFLMTDIDIWPDVNAYQAL 321
++Q+S +R WMLP +C+RW GPI +AI E D + +K L P S + +S A P YPVN LRN+A+ V TTHFL+TD+D+WP Y L
Sbjct: 166 VSQSSPDRIWMLPHICERWEGPIIVAIFMHGFTAEHDAFMANLKCPQLQCLPVHPSVPASSSIPASVWAA------PNLYPVNALRNLAISEVRTTHFLLTDMDLWPSRRLYPLL 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78113.15481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78113.15481.1 >prot_H-elongata_contig78113.15481.1 ID=prot_H-elongata_contig78113.15481.1|Name=mRNA_H-elongata_contig78113.15481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp MLPFLCKRWPGPISIAILEEDREVRVVKWLVACGTLPEELCSRMLISSTRback to top mRNA from alignment at H-elongata_contig78113:419..1559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78113.15481.1 ID=mRNA_H-elongata_contig78113.15481.1|Name=mRNA_H-elongata_contig78113.15481.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1141bp|location=Sequence derived from alignment at H-elongata_contig78113:419..1559+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78113:419..1559+ >mRNA_H-elongata_contig78113.15481.1 ID=mRNA_H-elongata_contig78113.15481.1|Name=mRNA_H-elongata_contig78113.15481.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=588bp|location=Sequence derived from alignment at H-elongata_contig78113:419..1559+ (Himanthalia elongata Himel1 dioecious)back to top |