mRNA_H-elongata_contig77877.15461.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3Q0QQV4_AMPCI (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Heroini TaxID=318529 RepID=A0A3Q0QQV4_AMPCI) HSP 1 Score: 67.4 bits (163), Expect = 1.920e-9 Identity = 56/159 (35.22%), Postives = 72/159 (45.28%), Query Frame = 3
Query: 222 SGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNN-SGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQ-------PPCRKEYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
+G L DNF+TSP LF L + A GT+R N G KT ++N R + + R + F W+D+RDVFF STIH G + +R+ K K EGH PP K+Y+ MGG D DQ Y HK WY
Sbjct: 305 TGYKLYLDNFYTSPTLFRDLYQQRIRACGTMRIN--GVGYPKT-------KINALDSIALRGSIRWLREDPLLFVQWRDTRDVFFCSTIHTAH----GTETVKRKIKDK-----EGHWSSKDIPIPPAVKDYNQHMGGVDLSDQLTGYYDVLHKTKKWY 445
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3B4TFC7_SERDU (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Seriola TaxID=8160 RepID=A0A3B4TFC7_SERDU) HSP 1 Score: 65.5 bits (158), Expect = 9.140e-9 Identity = 56/174 (32.18%), Postives = 79/174 (45.40%), Query Frame = 3
Query: 183 FDACVAFGAH-LKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIH------IYEKHFKGIKYTRRQGKGKKEKQFEGHQPPCRK---EYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
+D + F + SG L CDN++TSP LF+ L + V A GT R N R E++T +++ R + + R G + F W DS+ V STIH I ++H KG K+ Q++ P EY+ MGG D DQ Y+ HHK WY
Sbjct: 365 YDTVIGFMSQKYLGSGYHLYCDNYYTSPKLFMELCSLKVCACGTYRDNRR---ESRTKKKDS-----------RGTIRWMRNGPLLFVKWMDSKQVSICSTIHTVYSGEIAKRHVKG-----------KDGQWKIQNIPMPTPVAEYNKYMGGVDLSDQLIQYYSVHHKTMSWY 513
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A6P8I652_ACTTE (piggyBac transposable element-derived protein 4-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I652_ACTTE) HSP 1 Score: 62.8 bits (151), Expect = 5.270e-8 Identity = 49/152 (32.24%), Postives = 67/152 (44.08%), Query Frame = 3
Query: 207 AHLKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQPPCRKEYSMKMGGTDKGDQYNSLYAFHHKA 662
+ L+D GI++ DNFFT L L Y VGTLR+N +G EA + N KR G+I +WKD++ V F S +H + T Q K KK + PP Y++ MG D+ DQ YA K+
Sbjct: 64 SELRDQGIIVCIDNFFTGFPLMKELRQWSTYVVGTLRTNRKGYPEAL-------KNANLLKGMKRGDYHTVACGEIVCAVWKDTKHVTFVSNVHSSSGN------TTIQRKLKKGGKLSLPCPPSAVSYNVNMGAVDRHDQMVQSYAIDRKS 202
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3B4TF50_SERDU (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4TF50_SERDU) HSP 1 Score: 62.8 bits (151), Expect = 7.090e-8 Identity = 52/160 (32.50%), Postives = 74/160 (46.25%), Query Frame = 3
Query: 222 SGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIH------IYEKHFKGIKYTRRQGKGKKEKQFEGHQPPCRK---EYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
SG L CDN++TSP LF+ L + V+A GT R N R E++T +++ R + + R G + F W D+ V STIH I ++H KG K+ Q++ P EY+ MGG D DQ ++ HHK WY
Sbjct: 335 SGYHLYCDNYYTSPKLFMELCSLKVHACGTYRDNRR---ESRTKKKDS-----------RGTIRWMRNGPLLFVKWMDTTQVSMCSTIHTVYSGEIAKRHVKG-----------KDGQWKIQNIPMPTPVAEYNKYMGGVDLSDQLIQYFSVHHKTMRWY 469
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3Q1B481_AMPOC (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Amphiprion ocellaris TaxID=80972 RepID=A0A3Q1B481_AMPOC) HSP 1 Score: 58.5 bits (140), Expect = 1.930e-6 Identity = 53/165 (32.12%), Postives = 68/165 (41.21%), Query Frame = 3
Query: 183 FDACVAF-GAHLKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQPPCRKEYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
FDA ++ SG + CDNF+TSP LFL L G A GT R G + K +N G + F W D+R+V ST+H F G R G+K E P K+Y+ MGG D DQ N Y+ K+ WY
Sbjct: 296 FDAVMSLINKSYLGSGYHIYCDNFYTSPALFLHLHHLGFGACGTYRDARIGIPKTK---------IN---------------GPLLFIKWMDTREVSVCSTLHTA---FSGDTVKRMCKVGRKYAAVEVPVPAAVKDYNSYMGGVDLSDQLNGSYSSWRKSRKWY 433
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A671S3K9_9TELE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671S3K9_9TELE) HSP 1 Score: 55.8 bits (133), Expect = 1.580e-5 Identity = 52/158 (32.91%), Postives = 71/158 (44.94%), Query Frame = 3
Query: 213 LKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFR-KRSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQ---PPCRKEYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
L G L DNF+TSP LF+ L+A A GT+R+N RG K N+ R +R + + R G + F W D+R+V ST+H K + G RR E ++E + P K+Y+ MG D D Y HK WY
Sbjct: 329 LLGKGYQLFIDNFYTSPCLFMDLLAKKTLACGTIRTNRRGFPRTK---------ANDLSRRDQRGTIRWLRDGKLLFVKWMDTREVTVCSTMH---KAYDGDAVLRRVKNP--EGEWERRRIPIPAAVKDYNKYMGVVDLSDALIGYYNVLHKTTKWY 472
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3B4Z974_9TELE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4Z974_9TELE) HSP 1 Score: 53.5 bits (127), Expect = 9.250e-5 Identity = 52/173 (30.06%), Postives = 77/173 (44.51%), Query Frame = 3
Query: 183 FDACVAF-GAHLKDSGIMLVCDNFFTSPI-LFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRKRSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQ-------PPCRKEYSMKMGGTDKGDQYNSLY-AFHHKAYWY 671
+D+ ++ L D+G L DNF+ SP LF L + A GT+R+N +G +T + + + R + + R + WKD RDVF ST+H+ H K Q ++ K GH PP K+Y+ +MGG D D Y A H + WY
Sbjct: 300 YDSVISLLNTDLLDTGYKLYVDNFYASPAGLFWDLRQKNISACGTIRTNRQGYP--RTTINALDPKS------PRGSIRWIRENPLLSVQWKDMRDVFLCSTMHMA--HGK-------QTVQRRVKDDAGHWSMKDVPIPPAIKDYNRQMGGVDLSDALIGYYEAVHKRKKWY 455
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: A0A3N0Y7T0_ANAGA (PiggyBac transposable element-derived protein 4 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Y7T0_ANAGA) HSP 1 Score: 52.8 bits (125), Expect = 9.470e-5 Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 3
Query: 213 LKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRK-RSQMVFARMGDIAFTLWKDSRDVFFASTIH 488
L G L DNF+TSP LF+ L+A A GT+R+N +G + K N+ R R + + R G + F WKD+R+V ST+H
Sbjct: 8 LLGGGCQLFMDNFYTSPCLFMDLLAKKTLACGTVRTNRQGFPKMK---------ANDLSRRDPRGTIRWLRDGKLLFLKWKDTREVTMCSTMH 91
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Match: UPI001C5A166E (piggyBac transposable element-derived protein 4-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C5A166E) HSP 1 Score: 53.5 bits (127), Expect = 9.850e-5 Identity = 51/158 (32.28%), Postives = 71/158 (44.94%), Query Frame = 3
Query: 213 LKDSGIMLVCDNFFTSPILFLCLVACGVYAVGTLRSNLRGAAEAKTWLRENNEEVNNSGFRK-RSQMVFARMGDIAFTLWKDSRDVFFASTIHIYEKHFKGIKYTRRQGKGKKEKQFEGHQ---PPCRKEYSMKMGGTDKGDQYNSLYAFHHKAY-WY 671
L G L DNF+TSP LF+ L+A A GT+R+N +G + K N+ R R + + R G + F W D+R+V ST+H K + G RR + +E + P K+Y+ MGG D D Y HK WY
Sbjct: 372 LLGGGYQLFMDNFYTSPCLFMDLLAKKTLACGTVRTNRQGFPKMK---------ANDLSRRDPRGTIRWLRDGKLLFLKWMDTREVTMCSTMH---KAYGGETVLRRVKNP--DGSWEMRKIPIPVAVKDYNKYMGGVDLSDALIGYYNVLHKTTKWY 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77877.15461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77877.15461.1 >prot_H-elongata_contig77877.15461.1 ID=prot_H-elongata_contig77877.15461.1|Name=mRNA_H-elongata_contig77877.15461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp MCCIVIFVLFDACVAFGAHLKDSGIMLVCDNFFTSPILFLCLVACGVYAVback to top mRNA from alignment at H-elongata_contig77877:345..1589- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77877.15461.1 ID=mRNA_H-elongata_contig77877.15461.1|Name=mRNA_H-elongata_contig77877.15461.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1245bp|location=Sequence derived from alignment at H-elongata_contig77877:345..1589- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77877:345..1589- >mRNA_H-elongata_contig77877.15461.1 ID=mRNA_H-elongata_contig77877.15461.1|Name=mRNA_H-elongata_contig77877.15461.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig77877:345..1589- (Himanthalia elongata Himel1 dioecious)back to top |