mRNA_H-elongata_contig77807.15457.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77807.15457.1
Unique NamemRNA_H-elongata_contig77807.15457.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 8.880e-92
Identity = 155/180 (86.11%), Postives = 166/180 (92.22%), Query Frame = 1
Query:   10 AAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
            A YR+TALLVRRSTP+ SRHWDFD+ASIFA+IDAFVQRCSELLEVCESQIQLARK+ GE G+S  LPEFGGTRGQE  ITKALLGIQ+SFE QIDKLR+LDY VLDV TSRWHDDYNSFKDVVKDLEVMYTNVI+TAFEGITRITDAVALLEIF++LARRDAIKQ CLKKT  TYMLFVR
Sbjct:  480 AVYRRTALLVRRSTPEPSRHWDFDEASIFAQIDAFVQRCSELLEVCESQIQLARKTMGEGGESGALPEFGGTRGQE--ITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVR 657          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: F0YHG5_AURAN (DHC_N1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG5_AURAN)

HSP 1 Score: 206 bits (523), Expect = 3.850e-65
Identity = 102/151 (67.55%), Postives = 127/151 (84.11%), Query Frame = 1
Query:   94 FAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
            FA+IDAFVQRC +LLEVCE QIQ  RKS+   G+  +LP FGGTRG E  ITKAL+ IQ+ FE QID+LR+LDY++LDVKTS WHDDYN FK+ VKDLEVMYTNV++TAFEG+TR+++AVA+LEIF+SLA+RDAI++   KKT + YMLF+
Sbjct:    1 FAQIDAFVQRCRDLLEVCEGQIQFCRKSSETHGRPGSLPRFGGTRGHE--ITKALIEIQDQFEQQIDRLRNLDYEILDVKTSHWHDDYNVFKNSVKDLEVMYTNVMNTAFEGVTRVSEAVAVLEIFYSLAKRDAIQRCVEKKTVDMYMLFI 149          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A835Z4V1_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V1_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.940e-63
Identity = 109/178 (61.24%), Postives = 136/178 (76.40%), Query Frame = 1
Query:   10 AAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
            A YRKTA LV +S  D +RHW FDDAS+FA+IDAF QRCS+LLE+CE Q+Q AR ++   G++  LPEFGGTRGQE  + KAL GI  +F     +LR LDYDVLDVK  RWHDD+ +F  + KDLEVMY+NVI+ AF+G+ R+ DAVALLE+F++LARR  IKQTCLKKT + Y+ F
Sbjct:  307 AVYRKTAALVAQSASDPARHWTFDDASLFAQIDAFAQRCSDLLELCEGQVQFARATSASRGRALDLPEFGGTRGQE--LGKALEGIAAAFGAHAARLRALDYDVLDVKIGRWHDDFATFTTLAKDLEVMYSNVINAAFDGVARVADAVALLEMFYTLARRPHIKQTCLKKTADVYVQF 482          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A6H5KP60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP60_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 9.720e-56
Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 1
Query:  181 GEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
            GE G+S  LPEFGGTRGQE  I+KALLGIQ+SFE QIDKLR+LDY VLDV TSRWHDDYNSFKDVVKDLEVMYTNVI+TAFEGITRI DAVALLEIF++LARRDAIKQ CLKKT  TYMLFVR
Sbjct:    2 GEGGESGGLPEFGGTRGQE--ISKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRIIDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVR 122          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A2R5GWD4_9STRA (Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWD4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.980e-51
Identity = 101/179 (56.42%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTG-EFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
            Y++TA  V   T D S+HW+FD ASIFA++DAFVQRC +LLEVCE QIQ ARKS     G    LP FGGTRG E  I K LL I++ F   ID LR L+YDVLDVK +RWH+DYN  K+ +KDLEVM  NVI++AFE +T +   V LLE F  LA+R+AI +   KKT E + LF R
Sbjct:  498 YKRTADAVAMHTKDESKHWNFDIASIFAQVDAFVQRCRDLLEVCEGQIQFARKSRDLPRGVRAPLPVFGGTRGAE--IAKQLLEIEDQFAKHIDHLRGLEYDVLDVKATRWHEDYNHLKNGMKDLEVMMQNVINSAFESVTTVAAGVDLLEAFSELAKREAITRCVTKKTAEVFQLFGR 674          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A7S4EBE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBE8_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.120e-48
Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSR-HWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
            Y +TA  +R + P S   HW FD  SIFA+ DAFVQRC +LLEVCE QIQ  RKS    G  +++  F G RGQE  +TK+L+ IQ  F+ QI +L  L Y +LDV+ S WH+D+N FK+ VKDLEVMYTN+IS +FEG+  + +AV +L+IF SLA+RDAIK+   KK ++ Y+LF+
Sbjct:  343 YYRTAAAIRLAYPSSPELHWTFDATSIFAQTDAFVQRCRDLLEVCEGQIQFRRKSYTTAG-DNSVSFFKGLRGQE--VTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFI 517          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A8J2WYK5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYK5_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.310e-48
Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSR-HWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
            Y +TA  +R + P S   HW FD  SIFA+ DAFVQRC +LLEVCE QIQ  RKS    G  +++  F G RGQE  +TK+L+ IQ  F+ QI +L  L Y +LDV+ S WH+D+N FK+ VKDLEVMYTN+IS +FEG+  + +AV +L+IF SLA+RDAIK+   KK ++ Y+LF+
Sbjct:  369 YYRTAAAIRLAYPSSPELHWTFDATSIFAQTDAFVQRCRDLLEVCEGQIQFRRKSYTTAG-DNSVSFFKGLRGQE--VTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFI 543          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A2P4YQ39_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQ39_9STRA)

HSP 1 Score: 176 bits (445), Expect = 5.460e-48
Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
            YRK    V  + P   R W+FD+  IFA+IDAFVQRC ELLEVCE QIQ ARK  G  GK   LP FGG RG +  I K+L GI+  FE  +D+LR LDYD+LDVK + WH D+NSFK+ +KDLE M  NVI+ AFE I+ +   V ++  F  +A+R+AIK+   K+T + + +F
Sbjct:   62 YRKAVKAVNAAAPSPDRRWNFDETGIFAQIDAFVQRCRELLEVCEGQIQFARKGKG--GKREDLPTFGGNRGMD--IVKSLRGIEAQFEGHVDRLRQLDYDILDVKITSWHSDFNSFKNGMKDLEAMTQNVINGAFESISTVATGVDMIRSFQKIAQREAIKRCVEKRTIDIFGMF 233          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A482RZ06_9ARCH (DHC_N1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ06_9ARCH)

HSP 1 Score: 176 bits (446), Expect = 8.900e-48
Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
            Y K    + R      + W+ DDASIFA+IDAFVQRC +L+E+CESQ+Q  RKS+   G    +P FGGT+ QE  I   + GIQESFE  I+ LR LDYDVLDVK S+WHDDYN FK+ VKDLEVM+TNV++ AFE    +++ V L+E F+ LA+RD I +   +K  E   +F
Sbjct:  436 YHKAVAAIVRQRSRYGKVWEIDDASIFAQIDAFVQRCRDLIEICESQMQFCRKSSATKGHPGPVPHFGGTKAQE--IIDGINGIQESFENHINTLRKLDYDVLDVKISKWHDDYNHFKNDVKDLEVMFTNVMNAAFEVNATVSEGVLLVETFYRLAKRDVIIRCVERKAAEINHMF 609          
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A662WW69_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW69_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.500e-47
Identity = 89/176 (50.57%), Postives = 120/176 (68.18%), Query Frame = 1
Query:   16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
            Y + ++ V  + P   R W+FD+  IFA+IDAFVQRC ELLEVCE QIQ ARK  G+ GK   LP FGG RG E  I K+L GI+  FE  +D+LR LDYD+LDVK + WH D+NSFK+ +KDLE M  NVI+ AFE ++ ++  V +L  F  +A+R+AIK+   K+T + + +F
Sbjct:  363 YHRASVAVNATAPSPDRRWNFDETGIFAQIDAFVQRCRELLEVCEGQIQFARK--GKDGKREELPTFGGNRGME--IVKSLRGIEAQFEGHVDRLRKLDYDILDVKNTSWHSDFNSFKNGMKDLEAMTQNVINGAFESVSTVSAGVDMLRSFQKIAQREAIKRCVEKRTIDIFGMF 534          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWX3_ECTSI8.880e-9286.11Axonemal 1-beta dynein heavy chain dynein heavy ch... [more]
F0YHG5_AURAN3.850e-6567.55DHC_N1 domain-containing protein (Fragment) n=1 Ta... [more]
A0A835Z4V1_9STRA3.940e-6361.24Dynein heavy chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A6H5KP60_9PHAE9.720e-5684.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GWD4_9STRA4.980e-5156.42Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fer... [more]
A0A7S4EBE8_9STRA2.120e-4852.81Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A8J2WYK5_9STRA3.310e-4852.81Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2P4YQ39_9STRA5.460e-4851.14Dynein heavy chain (Fragment) n=1 Tax=Phytophthora... [more]
A0A482RZ06_9ARCH8.900e-4851.70DHC_N1 domain-containing protein (Fragment) n=1 Ta... [more]
A0A662WW69_9STRA1.500e-4750.57Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77807contigH-elongata_contig77807:1039..2771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.8
Seed ortholog evalue1.1e-79
Seed eggNOG ortholog2880.D7FWX3
Preferred nameDNAH2
KEGG koko:K10408
KEGG Pathwayko05016,map05016
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008017,GO:0008092,GO:0008150,GO:0008569,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0031514,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036156,GO:0036159,GO:0040011,GO:0042623,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045503,GO:0045505,GO:0048870,GO:0051179,GO:0051674,GO:0051959,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494,GO:1990939
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionaxonemal 1-beta dynein heavy chain dynein heavy chain
Ec32 orthologEc-09_004820.1
Exons4
Model size552
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77807.15457.1prot_H-elongata_contig77807.15457.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77807 1039..2771 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931183.6094635-CDS-H-elongata_contig77807:1038..11401622931183.6094635-CDS-H-elongata_contig77807:1038..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 1039..1140 +
1691679732.3315446-CDS-H-elongata_contig77807:1038..11401691679732.3315446-CDS-H-elongata_contig77807:1038..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 1039..1140 +
1622931183.6310916-CDS-H-elongata_contig77807:1389..15301622931183.6310916-CDS-H-elongata_contig77807:1389..1530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 1390..1530 +
1691679732.3495347-CDS-H-elongata_contig77807:1389..15301691679732.3495347-CDS-H-elongata_contig77807:1389..1530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 1390..1530 +
1622931183.650676-CDS-H-elongata_contig77807:2020..21671622931183.650676-CDS-H-elongata_contig77807:2020..2167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 2021..2167 +
1691679732.3615613-CDS-H-elongata_contig77807:2020..21671691679732.3615613-CDS-H-elongata_contig77807:2020..2167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 2021..2167 +
1622931183.6770968-CDS-H-elongata_contig77807:2609..27711622931183.6770968-CDS-H-elongata_contig77807:2609..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 2610..2771 +
1691679732.3715312-CDS-H-elongata_contig77807:2609..27711691679732.3715312-CDS-H-elongata_contig77807:2609..2771Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77807 2610..2771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77807.15457.1

>prot_H-elongata_contig77807.15457.1 ID=prot_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
MQQAAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCE
SQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKL
RHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDA
VALLEIFFSLARRDAIKQTCLKKTNETYMLFVR*
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mRNA from alignment at H-elongata_contig77807:1039..2771+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77807.15457.1 ID=mRNA_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1733bp|location=Sequence derived from alignment at H-elongata_contig77807:1039..2771+ (Himanthalia elongata Himel1 dioecious)
ATGCAACAGGCAGCCTACCGAAAAACGGCACTGTTAGTTCGTCGGAGCAC GCCGGATTCCTCACGCCATTGGGACTTTGATGATGCCTCCATTTTCGCCG AGGTAGTAATGATATTTGACCGCATTGATGACAAAGTTCTCGTTACATCC AGCGATGAGGTGACACCAACCTTAGCCCCTCTTTTTTGTCGCGAGAGTTT CTCTGTTTGTATCTACCTTGGGTGCGTCCAACGATACGCTCATATACGTT TCTTGAAGATTTAAGTCTATTTTCCAGATAGGGCCTCTCGCAACGTAAAT TTCCCTGTAAAGCAACACCTCCCATCGCACCGCGCCATATGCCACTTGCA GATCGACGCTTTTGTACAACGTTGTTCTGAGCTACTAGAGGTGTGTGAGA GTCAGATTCAGCTTGCCAGGAAATCTACGGGCGAGTTTGGAAAATCGCAC ACGCTACCGGAGTTTGGTGGCACTCGGGGACAAGAGGGGCGTGTCGGGAA GGGAAATTGCATCGGATTGCTATGAAGACGTCGTCGGCCATATGCTGCTT TTGTAATATTATGGAAATGTTATTCACCGTCCAAGGAGGCACTTCCACCG AGACTATGCGTAGGCACGAAATTGCGCCTAAACGCTGGCGTTTTTAAAAG TAGATTCGTCGGAAGTTTCCATTCAATTTGAAATTATAGAATATAAACTT TCTTGTCGCATCAAAAGATATGTGAGGCATTTATCAAGGATTGTCTCTTG CTTCTATATTTAGCTAAGGAAGACGGTGATATAAATCATTATTTATACAT TAGGAAAACCCTTCGTGCGTAGTCGAGTCCGAGATCGAAGACTAAAATAC CCCTAGGTGCGAGCCTGTCACAATCACCACGCCTCGGGAGTCGTCTATAA CATTAGCTCCCCCAAATGAAACTAATGGGGGGTCTAAGCGACTCTTGTGC GTATGTCCCGCGTGGATTCCAATGCGGCTCAGATTACAAAGGCTCTCCTC GGTATCCAGGAGTCATTCGAGATACAAATTGACAAGCTCCGACACCTAGA CTACGATGTGCTCGACGTCAAGACCTCGCGATGGCATGACGACTACAATT CATTTAAGGACGTCGTGAAGGATCTCGAGGTGTTGCATCAGTGGTGCGGG CGGCCGCCGGGAAAGTATGTACAAATATGACTGGGTGGCATTACGACGTA ATCGCTTGACGGTAGTTCCGAAATGTCCTGGCTCAGTGAAGCAACAGCTT CGAGAAACGCTTCAGTACTCCCATGGGAATCACATGTATGTGCAAGCCTT TGAAACGTTTTTCGGTCAAAAACTCGGAACAGCCAACCGATTCCTGGTGA AACTTTATCACTCAACCTTCGTCCCTCAATATTTCACTACATGGATCGAT TTTGCCTAGAAGCTACACCTATGACGGGCAACCTCGAGCGCACCGTCTCA GTGCTCTTCCGAGCACTTTACTCTGTAAATTCTCCACTACCGTTAATACA ACCGGTTCCGATTGATAGGGTCACGGGCGAGCGCCACATATCTTTTCTCG CCCATACTGTACCATCTTCAGGTAATGTACACTAACGTCATCAGCACCGC GTTTGAAGGCATCACAAGAATAACGGATGCCGTGGCGCTGCTAGAGATCT TCTTTAGCCTGGCAAGACGGGACGCCATCAAGCAAACGTGCCTTAAGAAG ACGAACGAAACCTACATGCTCTTTGTCAGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig77807:1039..2771+

>mRNA_H-elongata_contig77807.15457.1 ID=mRNA_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig77807:1039..2771+ (Himanthalia elongata Himel1 dioecious)
ATGCAACAGGCAGCCTACCGAAAAACGGCACTGTTAGTTCGTCGGAGCAC
GCCGGATTCCTCACGCCATTGGGACTTTGATGATGCCTCCATTTTCGCCG
AGATGCAACAGGCAGCCTACCGAAAAACGGCACTGTTAGTTCGTCGGAGC
ACGCCGGATTCCTCACGCCATTGGGACTTTGATGATGCCTCCATTTTCGC
CGAGATCGACGCTTTTGTACAACGTTGTTCTGAGCTACTAGAGGTGTGTG
AGAGTCAGATTCAGCTTGCCAGGAAATCTACGGGCGAGTTTGGAAAATCG
CACACGCTACCGGAGTTTGGTGGCACTCGGGGACAAGAGGGGCGTATCGA
CGCTTTTGTACAACGTTGTTCTGAGCTACTAGAGGTGTGTGAGAGTCAGA
TTCAGCTTGCCAGGAAATCTACGGGCGAGTTTGGAAAATCGCACACGCTA
CCGGAGTTTGGTGGCACTCGGGGACAAGAGGGGCGTATTACAAAGGCTCT
CCTCGGTATCCAGGAGTCATTCGAGATACAAATTGACAAGCTCCGACACC
TAGACTACGATGTGCTCGACGTCAAGACCTCGCGATGGCATGACGACTAC
AATTCATTTAAGGACGTCGTGAAGGATCTCGAGATTACAAAGGCTCTCCT
CGGTATCCAGGAGTCATTCGAGATACAAATTGACAAGCTCCGACACCTAG
ACTACGATGTGCTCGACGTCAAGACCTCGCGATGGCATGACGACTACAAT
TCATTTAAGGACGTCGTGAAGGATCTCGAGGTAATGTACACTAACGTCAT
CAGCACCGCGTTTGAAGGCATCACAAGAATAACGGATGCCGTGGCGCTGC
TAGAGATCTTCTTTAGCCTGGCAAGACGGGACGCCATCAAGCAAACGTGC
CTTAAGAAGACGAACGAAACCTACATGCTCTTTGTCAGGTGAGTAATGTA
CACTAACGTCATCAGCACCGCGTTTGAAGGCATCACAAGAATAACGGATG
CCGTGGCGCTGCTAGAGATCTTCTTTAGCCTGGCAAGACGGGACGCCATC
AAGCAAACGTGCCTTAAGAAGACGAACGAAACCTACATGCTCTTTGTCAG
GTGA
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