mRNA_H-elongata_contig77605.15442.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: D7FZ84_ECTSI (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ84_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.920e-32 Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGKVILEAF V+IC APTDWNM++IA+EFIKE VR+ VGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR
Sbjct: 91 PEVTHSPLGKVILEAFVVDICGAPTDWNMADIADEFIKE--------VRELVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 164
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A6V1SBM3_HETAK (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SBM3_HETAK) HSP 1 Score: 113 bits (282), Expect = 1.790e-27 Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSP GK IL F V +C APTDWNM++IAEEFI+E VR+ VGPEGQVIGAVSGGVDSSVAAVLLQ+AIGDR
Sbjct: 205 PEVTHSPKGKDILRNFVVGMCNAPTDWNMTDIAEEFIRE--------VREKVGPEGQVIGAVSGGVDSSVAAVLLQRAIGDR 278
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A7S2UVV2_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVV2_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.750e-27 Identity = 58/82 (70.73%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSP GK +LE F V +CK+PTDWNM++IAEEFI+E VR VGP GQVIGAVSGGVDSSVAA LLQKAIGDR
Sbjct: 208 PEVTHSPSGKKMLENFVVGVCKSPTDWNMTDIAEEFIQE--------VRDRVGPTGQVIGAVSGGVDSSVAATLLQKAIGDR 281
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A485LAZ1_9STRA (GMP synthase (glutamine-hydrolyzing) n=14 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAZ1_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.120e-26 Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGKV+L+ F V+IC +PTDWNM NIA+ FI+E VR+TVGP G VIGAVSGGVDSSVAA LL +AIGDR
Sbjct: 185 PEVTHSPLGKVLLKNFVVDICGSPTDWNMRNIADAFIEE--------VRQTVGPNGHVIGAVSGGVDSSVAAALLHRAIGDR 258
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A418B2P0_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2P0_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.960e-26 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGKV+L+ F V+IC +PTDWNM +IA+ FI+E VR+TVGP G VIGAVSGGVDSSVAA LL +AIGDR
Sbjct: 92 PEVTHSPLGKVLLKNFVVDICGSPTDWNMRSIADAFIEE--------VRQTVGPHGHVIGAVSGGVDSSVAAALLHRAIGDR 165
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: M4BM70_HYAAE (GMP synthase (glutamine-hydrolyzing) n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4BM70_HYAAE) HSP 1 Score: 108 bits (269), Expect = 1.040e-25 Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGK IL F V ICK+PTDW+M +IA+ FI+E VR+TVGP+G VIGAVSGGVDSSVAAVLLQ+A+G+R
Sbjct: 184 PEVTHSPLGKDILRNFVVHICKSPTDWDMRSIADAFIEE--------VRETVGPDGHVIGAVSGGVDSSVAAVLLQRALGNR 257
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A421GYK1_9STRA (GMP synthase (glutamine-hydrolyzing) n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GYK1_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.050e-25 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSP GK IL F V ICK+PTDW+M +IA+ FI E VR+TVGPEG VIGAVSGGVDSSVAAVLLQ+A+GDR
Sbjct: 184 PEVTHSPRGKDILRNFVVNICKSPTDWDMRSIADSFIAE--------VRQTVGPEGHVIGAVSGGVDSSVAAVLLQRALGDR 257
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A5D6YZA6_9STRA (GMP synthase (glutamine-hydrolyzing) n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6YZA6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.650e-25 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGK IL+ F V+IC +PTDW+M NIA+ FI+E VR VGP G VIGAVSGGVDSSVAAVLLQ+A+GDR
Sbjct: 182 PEVTHSPLGKTILKNFVVDICGSPTDWDMKNIADAFIEE--------VRVRVGPHGHVIGAVSGGVDSSVAAVLLQRALGDR 255
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: T0S6B3_SAPDV (GMP synthase (glutamine-hydrolyzing) n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0S6B3_SAPDV) HSP 1 Score: 107 bits (267), Expect = 2.000e-25 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGK +L F V+ICK+PTDW+M NIAE FI+E VR+ VGP G VIGAVSGGVDSSVAA LL +AIGDR
Sbjct: 187 PEVTHSPLGKKLLSNFVVDICKSPTDWDMRNIAEVFIQE--------VREKVGPHGHVIGAVSGGVDSSVAAALLHRAIGDR 260
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Match: A0A2D4CHB3_PYTIN (GMP synthase (glutamine-hydrolyzing) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CHB3_PYTIN) HSP 1 Score: 107 bits (266), Expect = 2.700e-25 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKTVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDR 246
P+VTHSPLGK IL+ F V IC APTDW+M +IA+ FI+E VR VGPEG VIGAVSGGVDSSVAAVLLQ+A+GDR
Sbjct: 183 PEVTHSPLGKDILKNFVVNICGAPTDWDMRSIADAFIEE--------VRTMVGPEGHVIGAVSGGVDSSVAAVLLQRALGDR 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77605.15442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77605.15442.1 >prot_H-elongata_contig77605.15442.1 ID=prot_H-elongata_contig77605.15442.1|Name=mRNA_H-elongata_contig77605.15442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp PQVTHSPLGKVILEAFAVEICKAPTDWNMSNIAEEFIKEACFLLGGGVRKback to top mRNA from alignment at H-elongata_contig77605:1047..2741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77605.15442.1 ID=mRNA_H-elongata_contig77605.15442.1|Name=mRNA_H-elongata_contig77605.15442.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1695bp|location=Sequence derived from alignment at H-elongata_contig77605:1047..2741- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77605:1047..2741- >mRNA_H-elongata_contig77605.15442.1 ID=mRNA_H-elongata_contig77605.15442.1|Name=mRNA_H-elongata_contig77605.15442.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig77605:1047..2741- (Himanthalia elongata Himel1 dioecious)back to top |