mRNA_H-elongata_contig7670.15340.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 297 bits (761), Expect = 7.800e-86 Identity = 182/459 (39.65%), Postives = 250/459 (54.47%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRLTSGSECNWEDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG------GGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
S R+PSATLA +L +QLQFLATLSLVDY +E+ WL F LRW NLWWP + + ++ + SG V VGNLALV GI I +H+ VSG+E W+ +KR + + A+ RG EL+AR+ G R++ T+ D P S + S L +E DM +DE+ G G +V R ++ L+ +A R+ STSAWL+FPHVELVFLFFAFEG VA+ S +R + C + TA +VLYP +MF+ V RT LV+V + ++ F+ + + G GGL+ + + W + SL SWADKG+W TVQT D + RE +WFRIGFEP+FVD T+ GTWF+ + LVEW + A V V+I+N +VQL LFC ++ F IL+ ++PFAN
Sbjct: 1188 SNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGA-------LVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGG----RIICRTNPDLADPSPFARQAPQPSGTPST----------LHEEESDM-----------------------------------SDEEEG---GRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANS 1587
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 292 bits (748), Expect = 4.750e-84 Identity = 182/459 (39.65%), Postives = 242/459 (52.72%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRLTSGSECNWEDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG------GGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
S R+PSATLA +L +QLQFLA LSLVDY + WL F LRW NLWWP I D ++ T SE V VGNLALV GI I LH+ +VSG E W+ +KR + + A+ R SEL AR G + ++ P G+ +P +S + S L++DG + DE+ G G +V ++ L+ +A R+ STSAWL+FPHVELVFLFFAFEG VA+ S +R + C + TA +VLYP +MF V RT V+V D ++ F+ + + G GG + + + W + SL SWADKG+W TVQT + + RE +WFRIGFEP+FVD T+ GTWF+ + LVEW S+A V V+IDN VQL LFC + F ILV ++PFAN
Sbjct: 1417 SHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFE--TGASEIG-----ALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNP----------GLTDPSPFASRNPS------LVRDG----------------------------------------SQRTDEEEG---GRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANS 1809
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 292 bits (747), Expect = 6.440e-84 Identity = 185/459 (40.31%), Postives = 241/459 (52.51%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRLTSGSECNWEDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG------GGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
S R+PSATLA +L +QLQFLA LSLVDY + WL F LRW NLWWP I D ++ T SE V VGNLALV GI I LH+ +VSG E W+ +KR + + A+ R SEL AR G + +R P G+ +P S + S LV D R R DE+ G G +V ++ L+ +A R+ STSAWL+FPHVELVFLFFAFEG VA+ S +R + C + TA +VLYP +MF V RT V+V D ++ F+ + + G GG + ++ + W + SL SWADKG+W TVQT + + RE +WFRIGFEP+FVD T+ GTWF+ + LVEW S+A V V+IDN VQL LFC + F ILV ++PFAN
Sbjct: 1376 SHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFE--TGASEIG-----ALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNP----------GLTDPSPFGSRNPS-----------LVRD---------RSQR--------------------------TDEEEG---GRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANS 1768
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 282 bits (722), Expect = 8.020e-81 Identity = 183/480 (38.12%), Postives = 248/480 (51.67%), Query Frame = 1
Query: 19 ATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYD--GTNEHTSSRRLTSGSE------CNWEDN----ETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKV------YRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGS--LVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG-------------GGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
A L + +QLQFLATLSLVD E+ L F RW NLW P S + + T++ RRL C+W+ + + V +GN LV G I LLH+ +VSG+E YW+ +KR K E A+ G+S E + PV + D G + SS + ++D L + K+ +R + GS W+ G+ + +G D EEG L R + L+ +AE R+ S SAWL+FPHVELVFLFFA+EG VA+QVS +R AGC PV I A + LV YP +MF+ V RT V+V + +I F ++ G + GW+ D SL +WA+KG W T +T +EG RRE WFRIGFEP+FVD T+SG WFVA LVEW +L C+ LID ++QL LFCA++ F +LV+ RPFAN
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGS--WVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANS 1235
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 273 bits (697), Expect = 1.860e-80 Identity = 174/459 (37.91%), Postives = 242/459 (52.72%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRLTSGSECNWEDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG------GGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
S R+PSATL +L +QLQFLATLSLVDY +E+ WL F LRW NLWW + + ++ ++ SG V VGN+ALV GI I +H+ VSG+E W+ +K + + A+ RG EL+AR+ G R++ T+ D A P + Q+ L L +E DM +DE+ G G V R ++ LN +A R+ STSAWL+FPHVELVF FFAFEG VA+ S +R C + TA +VL P +MF+ V RT LV+V + ++ F+ + G GG + + + W+ + SL SWADK +W T QT D + RE +W RIGFEP+FV+ T+ GTWF+ + LVEW +LA V V+++N IVQL LFC + F IL+ ++PFAN
Sbjct: 208 SNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRA-------LVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGV----RIICRTNPD--------LADPSPFSRQAPHASGTLST--LNEEESDM-----------------------------------SDEEEG---GRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANS 607
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 249 bits (635), Expect = 1.760e-72 Identity = 169/467 (36.19%), Postives = 239/467 (51.18%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRL--TSGSE-CNWE-----DNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGG--GGLIRYYI----TGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
S+R PS T+A++L +Q+QFLATLSLVD E+ L LRW NLW P S+ G + RL GS C E D V +GN+ L + IV++H+++VS +E YW+ ++R E AQ RGI I G R+ D E D L+A+ + +G + RE AA D + EE + ++ R + +A+ R +S+S WLYFPH+EL+FL FAFEG +A+Q++ +R GC V +A LV+YP +M + RT V+V D +I F+ E+ G G + R ++ TG K D S+ +WA+ G W TV+T DE RE + FRIGFEP+FVD T+ +WF FL+E T +AC AVL+D+ +VQLFLFC ++ F +LVI RPFAN
Sbjct: 44 SVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSV---GRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIP-------IRGLGARRASRVAHSPDAESDPDELAASASN------------------------DGAMSREHA----------------------AADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANS 454
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 238 bits (608), Expect = 9.060e-68 Identity = 164/468 (35.04%), Postives = 244/468 (52.14%), Query Frame = 1
Query: 7 RKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISYDGTNEHTSSRRLTSGSECNWEDNET---------------FVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGGG--GLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
R PSAT+A +L+SQ+QFLATLS VD EE LRW NLW +S S E +SR ++ + ++++T + +GNLAL +G+ I H+L+ S +E YW+ ++R + + + RG+S SE+ +SG + MD G ++ GS +S GI M+ P + +Q + P G D + EEG R G+ + +++ R+ S S WL++PH+EL+FLFFAFEG V +Q++ +R A + A LVLYP +M + V RT V V DA+I F +E+ G + ++G K+D SL SWADKG+W TVQT ++ RR+ +WFRIGFEP+F D T++G+WF+ L+E LA +AVL+DN +Q LFCA++ F +LV +PFAN
Sbjct: 142 RSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFS-----EGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSG---------TWSQQPTMDDG---SSAGS------------------------------QSSGI------MQSPQRMERQAVSPY-DGGDSKSDEEEGGPRNTRPGNSI-GQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANS 554
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 223 bits (569), Expect = 4.430e-65 Identity = 157/435 (36.09%), Postives = 215/435 (49.43%), Query Frame = 1
Query: 121 ARLRWFNLWWPKSISYDG------TNEHTSSRRLTSGSE---------CNW---EDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISG-KPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGGGGLIRYY---ITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
A +RW NLW +S S +G +NE S+ SE +W D +F+ +GNLAL AG I LH+L+ S +E YW+ ++R + E A +S SE + G +P +K +D G + S T QS Q L++ V+ W + G D + G R + +++ R+ S SAWL++PH+ELVFL FAFEG V +QVS +R V A LV YP +M V RT V+V SDA+I F S++ G G Y I G + D SL +WADKG+W TVQT DE RR +WFRIGFEP+F D T++G+WF+ L+EW LAC+AVL+DN VQ LFCAI+ F +LV +PFAN+
Sbjct: 4 AWIRWVNLWPSQSFS-EGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLGTRPQQKN----------LDDGWSAGRQTSGTIQSPQ----LMEHQAVSS---------------------------------WDSTGGGDSTNEQKRGR--TNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDE-GSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 225 bits (574), Expect = 5.540e-61 Identity = 161/480 (33.54%), Postives = 231/480 (48.12%), Query Frame = 1
Query: 1 SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWPKSISY--------------DGTNEHTSSRRLTSGSECNW---EDNETFVPVGNLALVAGIFFCIVLLHLLIVSGLETYWMLEKRGKAEWNNAQTRGISESELRARISGKPVRKRVLPVTDKDEEMDCGILSATPGSSTSQSIQKKDDLLKDGLVADEDDMEGKVYRESRGITGSKMWMRVPGKSVQQNMWPAATGNDEQMGHEEGSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLV-----LYPTIMFMGVCRTTL---VQVCSDAVIEFRRFPSEKKGGGGLIRY--YITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVEWTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
+ R PS+T+AL+L+SQ+QFLATLS VD E L LRW NLW +S S G ++ + ++ +W D +F+ +GNLAL AG F I +H+L+ S +E YW+ ++R + E A +S T GSST + +R I ++ S W + TG ++ +E + R G + ++E R+ S SAWL++PH+ELVFLFFAFEG V +QVS +R V A L T+ +G + V+V SDA+I F +++ G Y +TG K D SL +WADKG W+TVQT DE RR+ +WFRIGFEP++ D T++G+WF L+EW +LAC+AVL+DN VQ LFCA++ F +LV+ +PFAN
Sbjct: 96 TFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLS----------------------------------TSGSST-------------------------AWSGTRAIQSPQLMEHQALPS-----WDS-TGRNDSTNVQEAARTNTRAGSSI-GQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANS 509
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 207 bits (526), Expect = 4.100e-57 Identity = 110/233 (47.21%), Postives = 141/233 (60.52%), Query Frame = 1
Query: 715 GSLVVQRRGDDVLNDIAEFRDKSTSAWLYFPHVELVFLFFAFEGFVAAQVSGVRLAGCLPVTITAAVGLVLYPTIMFMGVCRTTLVQVCSDAVIEFRRFPSEKKGGGGLIRYYITGWKHDRSLCSWADKGRWHTVQTLDEGLRRERNWFRIGFEPMFVDLTRSGTWFVAVFLVE------------------WTSLACVAVLIDNGIVQLFLFCAINLGKFAILVIVRPFANK 1359
G L R + L+ +AE R+ S AWL+FPHVELVFLFFA+EG VA+QVS +R AGCLPV I A + LV YP +MF+ V RT V+V + I F + GW+ D SL +WA+KG W T +T +EG+RRE WFRIGFEP+FVD T+SG WFVA LVE W +L C+ LID ++QL LFCA++ F +LV+ RPFAN+
Sbjct: 149 GGLGTLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF-------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANR 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7670.15340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7670.15340.1 >prot_H-elongata_contig7670.15340.1 ID=prot_H-elongata_contig7670.15340.1|Name=mRNA_H-elongata_contig7670.15340.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp SIRKPSATLALILSSQLQFLATLSLVDYHTEEEPWLKYFGARLRWFNLWWback to top mRNA from alignment at H-elongata_contig7670:7187..10049+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7670.15340.1 ID=mRNA_H-elongata_contig7670.15340.1|Name=mRNA_H-elongata_contig7670.15340.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2863bp|location=Sequence derived from alignment at H-elongata_contig7670:7187..10049+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7670:7187..10049+ >mRNA_H-elongata_contig7670.15340.1 ID=mRNA_H-elongata_contig7670.15340.1|Name=mRNA_H-elongata_contig7670.15340.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2724bp|location=Sequence derived from alignment at H-elongata_contig7670:7187..10049+ (Himanthalia elongata Himel1 dioecious)back to top |