mRNA_H-elongata_contig76281.15306.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A6J8BXS5_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BXS5_MYTCO) HSP 1 Score: 65.9 bits (159), Expect = 1.200e-10 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 25 IQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTETDQVVTKVRRVIRCS 246
++K+ SDGAS M+G++GG AALLKE P LI HC+AHR ALA+S A A+VP + +V ++ R + S
Sbjct: 825 LEKMCALGSDGASVMLGRKGGVAALLKESVPTLIANHCVAHRLALASSQAAAAVPYLKKFKAIVEQLYRFYQYS 898
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A8K0EBI2_BRALA (GAK protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EBI2_BRALA) HSP 1 Score: 65.5 bits (158), Expect = 1.660e-10 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 SIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTET 204
S+QK+ GF SDGA+CM+G++GG A LLK +N +I HC+AHR ALA A V ET
Sbjct: 896 SLQKVAGFGSDGAACMIGRKGGVATLLKVDNQTMINIHCVAHRAALAIGQAGGRVKYIGET 956
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A2G8KX78_STIJA (Putative zinc finger protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KX78_STIJA) HSP 1 Score: 65.1 bits (157), Expect = 2.190e-10 Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 28 QKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTETDQVVTKV 225
+KLVGF SDGAS M GKR G AA LKE P L+ HC++HR LA A ++PL + DQ + +
Sbjct: 276 KKLVGFGSDGASVMTGKRSGVAARLKEHQPQLVAVHCVSHRLELAIKDAMKTIPLYQKMDQFLLSI 341
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: UPI001603FE13 (zinc finger protein 862-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603FE13) HSP 1 Score: 64.3 bits (155), Expect = 4.110e-10 Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 22 SIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTA 174
SIQK+ GF SDGA+CM+G R G A LKEEN ++ HCIAHR ALA A
Sbjct: 355 SIQKVAGFGSDGAACMIGNRSGVATQLKEENARIVSIHCIAHRLALAVGQA 405
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A6J8DX34_MYTCO (DUF4371 domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DX34_MYTCO) HSP 1 Score: 62.0 bits (149), Expect = 4.960e-10 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 25 IQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVP 189
++ + SDGAS M+G++GG AAL+KE P LI HC+AHR ALA+S A A+VP
Sbjct: 104 LEMMCALGSDGASVMLGRKGGVAALMKESVPTLIANHCVAHRLALASSQAAAAVP 158
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A8J9YVS8_BRALA (ZNF862 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YVS8_BRALA) HSP 1 Score: 62.4 bits (150), Expect = 1.930e-9 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 22 SIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALA 162
SIQK+ GF SDGA+CM+G R G A LK+EN ++ HC+AHR ALA
Sbjct: 215 SIQKVAGFGSDGAACMIGNRSGVATQLKQENDKIVSIHCVAHRCALA 261
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A2G8JIN4_STIJA (Putative zinc finger protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JIN4_STIJA) HSP 1 Score: 60.5 bits (145), Expect = 9.180e-9 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 19 CSIQ------KLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTETDQVVTKV 225
C IQ KLVGF SDGAS M G+R G A +KE P L HCIAHR LA A +VP+ + DQ + +
Sbjct: 235 CGIQEPELWSKLVGFGSDGASVMTGRRSGVGARMKEHQPKLQTVHCIAHRLELAIKQASKNVPMVCKMDQFLINI 309
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A2G8KZ15_STIJA (Putative zinc finger protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KZ15_STIJA) HSP 1 Score: 60.5 bits (145), Expect = 9.330e-9 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 19 CSIQ------KLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTETDQVVTKV 225
C IQ KLVGF SDGAS M G+R G A +KE P L HCIAHR LA A +VP+ + DQ + +
Sbjct: 261 CGIQEPELWSKLVGFGSDGASVMTGRRSGVGARMKEHQPKLQTVHCIAHRLELAIKQASKNVPMVCKMDQFLINI 335
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: UPI001E1CD72E (protein ZBED8-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CD72E) HSP 1 Score: 58.5 bits (140), Expect = 3.520e-8 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 SIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPLTTET 204
S KLVG +DGA M+G R G AL+K++NP++I THC+ HR ALA+ T A + T ET
Sbjct: 44 SSAKLVGVCTDGAPSMLGSRSGFMALVKKKNPDIITTHCLIHREALASKTLPAPLKATLET 104
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Match: A0A8C7ZT64_9TELE (DUF4371 domain-containing protein n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7ZT64_9TELE) HSP 1 Score: 57.8 bits (138), Expect = 7.970e-8 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 16 GCSIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRGALAASTACASVPL 192
G +Q++V SDGAS M+GKR G AALLK++ P+L HC+AHR L+ A +PL
Sbjct: 105 GLDMQRMVMLTSDGASVMLGKRNGVAALLKQQIPHLTEQHCVAHREDLSIDDAWKDLPL 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76281.15306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76281.15306.1 >prot_H-elongata_contig76281.15306.1 ID=prot_H-elongata_contig76281.15306.1|Name=mRNA_H-elongata_contig76281.15306.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp LEATPGCSIQKLVGFVSDGASCMVGKRGGAAALLKEENPNLIGTHCIAHRback to top mRNA from alignment at H-elongata_contig76281:2421..2675- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76281.15306.1 ID=mRNA_H-elongata_contig76281.15306.1|Name=mRNA_H-elongata_contig76281.15306.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=255bp|location=Sequence derived from alignment at H-elongata_contig76281:2421..2675- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76281:2421..2675- >mRNA_H-elongata_contig76281.15306.1 ID=mRNA_H-elongata_contig76281.15306.1|Name=mRNA_H-elongata_contig76281.15306.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at H-elongata_contig76281:2421..2675- (Himanthalia elongata Himel1 dioecious)back to top |